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72 results for Hvidsten,+Torgeir+R

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ArticlesPeer ReviewedFull Text
Subfunctionalization versus neofunctionalization after whole-genome duplication
Author / Creator:Sandve, Simen R. ; Rohlfs, Rori V. ; Hvidsten, Torgeir R.
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2018-07, Vol.50 (7), p.908-909
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Gene co-expression network connectivity is an important determinant of selective constraint
Author / Creator:Mähler, Niklas ; Wang, Jing ; Terebieniec, Barbara K. ; Ingvarsson, Pär K. ; Street, Nathaniel R. ; Hvidsten, Torgeir R.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2017-04, Vol.13 (4), p.e1006402
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AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula
Author / Creator:Sundell, David ; Street, Nathaniel R. ; Kumar, Manoj ; Mellerowicz, Ewa J. ; Kucukoglu, Melis ; Johnsson, Christoffer ; Kumar, Vikash ; Mannapperuma, Chanaka ; Delhomme, Nicolas ; Nilsson, Ove ; Tuominen, Hannele ; Pesquet, Edouard ; Fischer, Urs ; Niittylä, Totte ; Sundberg, Björn ; Hvidsten, Torgeir R.
Publisher:United States: American Society of Plant Biologists
Journal title:The Plant cell, 2017-07, Vol.29 (7), p.1585-1604
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Plant Genome Integrative Explorer Resource: PlantGenIE.org
Author / Creator:Sundell, David ; Mannapperuma, Chanaka ; Netotea, Sergiu ; Delhomme, Nicolas ; Lin, Yao‐Cheng ; Sjödin, Andreas ; Van de Peer, Yves ; Jansson, Stefan ; Hvidsten, Torgeir R ; Street, Nathaniel R
Publisher:England: Academic Press
Journal title:The New phytologist, 2015-12, Vol.208 (4), p.1149-1156
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Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification
Author / Creator:Robertson, Fiona M. ; Gundappa, Manu Kumar ; Grammes, Fabian ; Hvidsten, Torgeir R. ; Redmond, Anthony K. ; Lien, Sigbjørn ; Martin, Samuel A. M. ; Holland, Peter W. H. ; Sandve, Simen R. ; Macqueen, Daniel J.
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2017-06, Vol.18 (1), p.111-111, Article 111
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Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication
Author / Creator:Gillard, Gareth B. ; Grønvold, Lars ; Røsæg, Line L. ; Holen, Matilde Mengkrog ; Monsen, Øystein ; Koop, Ben F. ; Rondeau, Eric B. ; Gundappa, Manu Kumar ; Mendoza, John ; Macqueen, Daniel J. ; Rohlfs, Rori V. ; Sandve, Simen R. ; Hvidsten, Torgeir R.
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2021-04, Vol.22 (1), p.103-103, Article 103
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Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut
Author / Creator:Michalak, Leszek ; Gaby, John Christian ; Lagos, Leidy ; La Rosa, Sabina Leanti ; Hvidsten, Torgeir R. ; Tétard-Jones, Catherine ; Willats, William G. T. ; Terrapon, Nicolas ; Lombard, Vincent ; Henrissat, Bernard ; Dröge, Johannes ; Arntzen, Magnus Øverlie ; Hagen, Live Heldal ; Øverland, Margareth ; Pope, Phillip B. ; Westereng, Bjørge
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-11, Vol.11 (1), p.5773-5773, Article 5773
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The genome regulatory landscape of Atlantic salmon liver through smoltification
Author / Creator:Harvey, Thomas N. ; Gillard, Gareth B. ; Røsæg, Line L. ; Grammes, Fabian ; Monsen, Øystein ; Vik, Jon Olav ; Hvidsten, Torgeir R. ; Sandve, Simen R.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2024-04, Vol.19 (4), p.e0302388-e0302388
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NorWood: a gene expression resource for evo-devo studies of conifer wood development
Author / Creator:Jokipii‐Lukkari, Soile ; Sundell, David ; Nilsson, Ove ; Hvidsten, Torgeir R. ; Street, Nathaniel R. ; Tuominen, Hannele
Publisher:England: New Phytologist Trust
Journal title:The New phytologist, 2017-10, Vol.216 (2), p.482-494
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Metabolic influence of core ciliates within the rumen microbiome
Author / Creator:Andersen, Thea O. ; Altshuler, Ianina ; Vera-Ponce de León, Arturo ; Walter, Juline M. ; McGovern, Emily ; Keogh, Kate ; Martin, Cécile ; Bernard, Laurence ; Morgavi, Diego P. ; Park, Tansol ; Li, Zongjun ; Jiang, Yu ; Firkins, Jeffrey L. ; Yu, Zhongtang ; Hvidsten, Torgeir R. ; Waters, Sinead M. ; Popova, Milka ; Arntzen, Magnus Ø. ; Hagen, Live H. ; Pope, Phillip B.
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2023-07, Vol.17 (7), p.1128-1140
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Ethylene signaling induces gelatinous layers with typical features of tension wood in hybrid aspen
Author / Creator:Felten, Judith ; Vahala, Jorma ; Love, Jonathan ; Gorzsás, András ; Rüggeberg, Markus ; Delhomme, Nicolas ; Leśniewska, Joanna ; Kangasjärvi, Jaakko ; Hvidsten, Torgeir R. ; Mellerowicz, Ewa J. ; Sundberg, Björn
Publisher:England: New Phytologist Trust
Journal title:The New phytologist, 2018-05, Vol.218 (3), p.999-1014
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ComPlEx: conservation and divergence of co-expression networks in A. thaliana, Populus and O. sativa
Author / Creator:Netotea, Sergiu ; Sundell, David ; Street, Nathaniel R ; Hvidsten, Torgeir R
Publisher:England: BioMed Central
Journal title:BMC genomics, 2014-02, Vol.15 (1), p.106-106, Article 106
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ArticlesPeer ReviewedFull Text
Towards integration of population and comparative genomics in forest trees
Author / Creator:Ingvarsson, Pär K. ; Hvidsten, Torgeir R. ; Street, Nathaniel R.
Publisher:England: New Phytologist Trust
Journal title:The New phytologist, 2016-10, Vol.212 (2), p.338-344
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A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of Populus trees
Author / Creator:Obudulu, Ogonna ; Mähler, Niklas ; Skotare, Tomas ; Bygdell, Joakim ; Abreu, Ilka N. ; Ahnlund, Maria ; Latha Gandla, Madhavi ; Petterle, Anna ; Moritz, Thomas ; Hvidsten, Torgeir R. ; Jönsson, Leif J. ; Wingsle, Gunnar ; Trygg, Johan ; Tuominen, Hannele
Publisher:England: BioMed Central
Journal title:BMC genomics, 2018-01, Vol.19 (1), p.11-11, Article 11
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ArticlesPeer ReviewedFull Text
SalMotifDB: a tool for analyzing putative transcription factor binding sites in salmonid genomes
Author / Creator:Mulugeta, Teshome Dagne ; Nome, Torfinn ; To, Thu-Hien ; Gundappa, Manu Kumar ; Macqueen, Daniel J. ; Våge, Dag Inge ; Sandve, Simen Rød ; Hvidsten, Torgeir R.
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2019-09, Vol.20 (1), p.694-694, Article 694
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ArticlesPeer ReviewedFull Text
Activity-dormancy transition in the cambial meristem involves stage-specific modulation of auxin response in hybrid aspen
Author / Creator:Baba, Kyoko ; Karlberg, Anna ; Schmidt, Julien ; Schrader, Jarmo ; Hvidsten, Torgeir R. ; Bako, Laszlo ; Bhalerao, Rishikesh P. ; Sederoff, Ronald R.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2011-02, Vol.108 (8), p.3418-3423
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Functional validation of transposable element–derived cis-regulatory elements in Atlantic salmon
Author / Creator:Sahlström, Hanna M ; Datsomor, Alex K ; Monsen, Øystein ; Hvidsten, Torgeir R ; Sandve, Simen Rød
Publisher:US: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2023-04, Vol.13 (4)
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OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants
Author / Creator:Srivastava, Vaibhav ; Obudulu, Ogonna ; Bygdell, Joakim ; Löfstedt, Tommy ; Rydén, Patrik ; Nilsson, Robert ; Ahnlund, Maria ; Johansson, Annika ; Jonsson, Pär ; Freyhult, Eva ; Qvarnström, Johanna ; Karlsson, Jan ; Melzer, Michael ; Moritz, Thomas ; Trygg, Johan ; Hvidsten, Torgeir R ; Wingsle, Gunnar
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2013-12, Vol.14 (1), p.893-893, Article 893
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Challenges in microarray class discovery: a comprehensive examination of normalization, gene selection and clustering
Author / Creator:Freyhult, Eva ; Landfors, Mattias ; Önskog, Jenny ; Hvidsten, Torgeir R ; Rydén, Patrik
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2010-10, Vol.11 (1), p.503-503, Article 503
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Leaf shape in Populus tremula is a complex, omnigenic trait
Author / Creator:Mähler, Niklas ; Schiffthaler, Bastian ; Robinson, Kathryn M. ; Terebieniec, Barbara K. ; Vučak, Matej ; Mannapperuma, Chanaka ; Bailey, Mark E. S. ; Jansson, Stefan ; Hvidsten, Torgeir R. ; Street, Nathaniel R.
Publisher:England: John Wiley & Sons, Inc
Journal title:Ecology and evolution, 2020-11, Vol.10 (21), p.11922-11940
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Subfunctionalization versus neofunctionalization after whole-genome duplication

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Gene co-expression network connectivity is an important determinant of selective constraint

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AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula

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Plant Genome Integrative Explorer Resource: PlantGenIE.org

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Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification

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Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication

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Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut

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The genome regulatory landscape of Atlantic salmon liver through smoltification

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NorWood: a gene expression resource for evo-devo studies of conifer wood development

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Metabolic influence of core ciliates within the rumen microbiome

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Ethylene signaling induces gelatinous layers with typical features of tension wood in hybrid aspen

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ComPlEx: conservation and divergence of co-expression networks in A. thaliana, Populus and O. sativa

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Towards integration of population and comparative genomics in forest trees

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A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of​ ​​Populus​​ ​trees

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SalMotifDB: a tool for analyzing putative transcription factor binding sites in salmonid genomes

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Activity-dormancy transition in the cambial meristem involves stage-specific modulation of auxin response in hybrid aspen

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Functional validation of transposable element–derived cis-regulatory elements in Atlantic salmon

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OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants

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Challenges in microarray class discovery: a comprehensive examination of normalization, gene selection and clustering

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Leaf shape in Populus tremula is a complex, omnigenic trait

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A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of Populus trees