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ArticlesPeer ReviewedFull Text
Evaluation and comparison of unsupervised methods for the extraction of spatial patterns from mass spectrometry imaging data (MSI)
Author / Creator:Prasad, Mridula ; Postma, Geert ; Franceschi, Pietro ; Buydens, Lutgarde M. C. ; Jansen, Jeroen J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-09, Vol.12 (1), p.15687-12, Article 15687
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ArticlesPeer ReviewedFull Text
Convolutional neural networks to predict brain tumor grades and Alzheimer’s disease with MR spectroscopic imaging data
Author / Creator:Acquarelli, Jacopo ; van Laarhoven, Twan ; Postma, Geert J. ; Jansen, Jeroen J. ; Rijpma, Anne ; van Asten, Sjaak ; Heerschap, Arend ; Buydens, Lutgarde M. C. ; Marchiori, Elena
Publisher:San Francisco: Public Library of Science
Journal title:PloS one, 2022-08, Vol.17 (8), p.e0268881
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Systematic reduction of hyperspectral images for high-throughput plastic characterization
Author / Creator:Ghaffari, Mahdiyeh ; Lukkien, Mickey C. J. ; Omidikia, Nematollah ; Tinnevelt, Gerjen H. ; van Eijk, Marcel C. P. ; Podchezertsev, Stanislav ; Jansen, Jeroen J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2023-12, Vol.13 (1), p.21591-10, Article 21591
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ArticlesPeer ReviewedFull Text
Chemometrics-assisted microfluidic paper-based analytical device for the determination of uric acid by silver nanoparticle plasmon resonance
Author / Creator:Hamedpour, Vahid ; Postma, Geert J. ; van den Heuvel, Edwin ; Jansen, Jeroen J. ; Suzuki, Koji ; Citterio, Daniel
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Analytical and bioanalytical chemistry, 2018-03, Vol.410 (9), p.2305-2313
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Multi-dimensional flow cytometry analysis reveals increasing changes in the systemic neutrophil compartment during seven consecutive days of endurance exercise
Author / Creator:van Staveren, Selma ; ten Haaf, Twan ; Klöpping, Margot ; Hilvering, Bart ; Tinnevelt, Gerjen H. ; de Ruiter, Karin ; Piacentini, Maria F. ; Roelands, Bart ; Meeusen, Romain ; de Koning, Jos J. ; Jansen, Jeroen J. ; Vrisekoop, Nienke ; Koenderman, Leo
Publisher:United States: Public Library of Science
Journal title:PloS one, 2018-10, Vol.13 (10), p.e0206175
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ArticlesPeer ReviewedFull Text
Plants Know Where It Hurts: Root and Shoot Jasmonic Acid Induction Elicit Differential Responses in Brassica oleracea
Author / Creator:Tytgat, Tom O.G. ; Verhoeven, Koen J. F. ; Jansen, Jeroen J. ; Raaijmakers, Ciska E. ; Bakx-Schotman, Tanja ; McIntyre, Lauren M. ; van der Putten, Wim H. ; Biere, Arjen ; van Dam, Nicole M.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-06, Vol.8 (6), p.e65502
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Novel data analysis method for multicolour flow cytometry links variability of multiple markers on single cells to a clinical phenotype
Author / Creator:Tinnevelt, Gerjen H. ; Kokla, Marietta ; Hilvering, Bart ; van Staveren, Selma ; Folcarelli, Rita ; Xue, Luzheng ; Bloem, Andries C. ; Koenderman, Leo ; Buydens, Lutgarde M. C. ; Jansen, Jeroen J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-07, Vol.7 (1), p.5471-11, Article 5471
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Non-Invasive Monitoring of Inflammation in Inflammatory Bowel Disease Patients during Prolonged Exercise via Exhaled Breath Volatile Organic Compounds
Author / Creator:Henderson, Ben ; Meurs, Joris ; Lamers, Carlijn R. ; Batista, Guilherme Lopes ; Materić, Dušan ; Bertinetto, Carlo G. ; Bongers, Coen C. W. G. ; Holzinger, Rupert ; Harren, Frans J. M. ; Jansen, Jeroen J. ; Hopman, Maria T. E. ; Cristescu, Simona M.
Publisher:Switzerland: MDPI AG
Journal title:Metabolites, 2022-03, Vol.12 (3), p.224
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ArticlesPeer ReviewedFull Text
Metabolomic analysis of the interaction between plants and herbivores
Author / Creator:Jansen, Jeroen J. ; Allwood, J. William ; Marsden-Edwards, Emma ; van der Putten, Wim H. ; Goodacre, Royston ; van Dam, Nicole M.
Publisher:Boston: Springer US
Journal title:Metabolomics, 2009-03, Vol.5 (1), p.150-161
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Field parasitism rates of caterpillars on Brassica oleracea plants are reliably predicted by differential attraction of Cotesia parasitoids
Author / Creator:Poelman, Erik H ; Oduor, Ayub M.O ; Broekgaarden, Colette ; Hordijk, Cornelis A ; Jansen, Jeroen J ; Van Loon, Joop J.A ; Van Dam, Nicole M ; Vet, Louise E.M ; Dicke, Marcel
Publisher:Oxford, UK: Oxford, UK : Blackwell Publishing Ltd
Journal title:Functional ecology, 2009-10, Vol.23 (5), p.951-962
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ArticlesPeer ReviewedFull Text
Exhaled Breath Reflects Prolonged Exercise and Statin Use during a Field Campaign
Author / Creator:Henderson, Ben ; Lopes Batista, Guilherme ; Bertinetto, Carlo G. ; Meurs, Joris ; Materić, Dušan ; Bongers, Coen C. W. G. ; Allard, Neeltje A. E. ; Eijsvogels, Thijs M. H. ; Holzinger, Rupert ; Harren, Frans J. M. ; Jansen, Jeroen J. ; Hopman, Maria T. E. ; Cristescu, Simona M.
Publisher:Switzerland: MDPI AG
Journal title:Metabolites, 2021-03, Vol.11 (4), p.192
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ArticlesPeer ReviewedFull Text
Preanalytical Pitfalls in Untargeted Plasma Nuclear Magnetic Resonance Metabolomics of Endocrine Hypertension
Author / Creator:Bliziotis, Nikolaos G. ; Kluijtmans, Leo A. J. ; Tinnevelt, Gerjen H. ; Reel, Parminder ; Reel, Smarti ; Langton, Katharina ; Robledo, Mercedes ; Pamporaki, Christina ; Pecori, Alessio ; Van Kralingen, Josie ; Tetti, Martina ; Engelke, Udo F. H. ; Erlic, Zoran ; Engel, Jasper ; Deutschbein, Timo ; Nölting, Svenja ; Prejbisz, Aleksander ; Richter, Susan ; Adamski, Jerzy ; Januszewicz, Andrzej ; Ceccato, Filippo ; Scaroni, Carla ; Dennedy, Michael C. ; Williams, Tracy A. ; Lenzini, Livia ; Gimenez-Roqueplo, Anne-Paule ; Davies, Eleanor ; Fassnacht, Martin ; Remde, Hanna ; Eisenhofer, Graeme ; Beuschlein, Felix ; Kroiss, Matthias ; Jefferson, Emily ; Zennaro, Maria-Christina ; Wevers, Ron A. ; Jansen, Jeroen J. ; Deinum, Jaap ; Timmers, Henri J. L. M.
Publisher:Switzerland: MDPI AG
Journal title:Metabolites, 2022-07, Vol.12 (8), p.679
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ArticlesPeer ReviewedFull Text
Variable Selection in Untargeted Metabolomics and the Danger of Sparsity
Author / Creator:Tinnevelt, Gerjen H. ; Engelke, Udo F.H. ; Wevers, Ron A. ; Veenhuis, Stefanie ; Willemsen, Michel A. ; Coene, Karlien L.M. ; Kulkarni, Purva ; Jansen, Jeroen J.
Publisher:Basel: MDPI AG
Journal title:Metabolites, 2020-11, Vol.10 (11), p.470
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ArticlesPeer ReviewedFull Text
Stress-induced DNA methylation changes and their heritability in asexual dandelions
Author / Creator:Verhoeven, Koen J. F. ; Jansen, Jeroen J. ; van Dijk, Peter J. ; Biere, Arjen
Publisher:Oxford, UK: Oxford, UK : Blackwell Publishing Ltd
Journal title:The New phytologist, 2010-03, Vol.185 (4), p.1108-1118
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ArticlesPeer ReviewedFull Text
Crossfit analysis: a novel method to characterize the dynamics of induced plant responses
Author / Creator:Jansen, Jeroen J ; van Dam, Nicole M ; Hoefsloot, Huub CJ ; Smilde, Age K
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2009-12, Vol.10 (1), p.425-425, Article 425
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ArticlesPeer ReviewedFull Text
Fluorescence spectroscopy and chemometrics for simultaneous monitoring of cell concentration, chlorophyll and fatty acids in Nannochloropsis oceanica
Author / Creator:Sá Marta ; Bertinetto, Carlo G ; Ferrer-Ledo Narcís ; Jansen, Jeroen J ; Wijffels Rene ; Crespo, João G ; Barbosa, Maria ; Galinha, Claudia F
Publisher:London: Nature Publishing Group
Journal title:Scientific reports, 2020-05, Vol.10 (1)
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ArticlesPeer ReviewedFull Text
Multi-set Pre-processing of Multicolor Flow Cytometry Data
Author / Creator:Folcarelli Rita ; Tinnevelt, Gerjen H ; Hilvering Bart ; Wouters Kristiaan ; van Staveren Selma ; Postma, Geert J ; Vrisekoop Nienke ; Buydens Lutgarde M C ; Koenderman Leo ; Jansen, Jeroen J
Publisher:London: Nature Publishing Group
Journal title:Scientific reports, 2020-06, Vol.10 (1)
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A novel data fusion method for the effective analysis of multiple panels of flow cytometry data
Author / Creator:Tinnevelt, Gerjen H. ; van Staveren, Selma ; Wouters, Kristiaan ; Wijnands, Erwin ; Verboven, Kenneth ; Folcarelli, Rita ; Koenderman, Leo ; Buydens, Lutgarde M. C. ; Jansen, Jeroen J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-05, Vol.9 (1), p.6777, Article 6777
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ArticlesPeer ReviewedFull Text
Automated flow cytometric identification of disease-specific cells by the ECLIPSE algorithm
Author / Creator:Folcarelli, Rita ; van Staveren, Selma ; Bouman, Roel ; Hilvering, Bart ; Tinnevelt, Gerjen H. ; Postma, Geert ; van den Brink, Oscar F. ; Buydens, Lutgarde M. C. ; Vrisekoop, Nienke ; Koenderman, Leo ; Jansen, Jeroen J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2018-07, Vol.8 (1), p.10907-18, Article 10907
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ArticlesPeer ReviewedFull Text
Novel chemistry of invasive plants: exotic species have more unique metabolomic profiles than native congeners
Author / Creator:Macel, Mirka ; Vos, Ric C. H. ; Jansen, Jeroen J. ; Putten, Wim H. ; Dam, Nicole M.
Publisher:England: John Wiley & Sons, Inc
Journal title:Ecology and evolution, 2014-07, Vol.4 (13), p.2777-2786
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Showing 1 to 20 of 37 results

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Evaluation and comparison of unsupervised methods for the extraction of spatial patterns from mass spectrometry imaging data (MSI)

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Convolutional neural networks to predict brain tumor grades and Alzheimer’s disease with MR spectroscopic imaging data

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Systematic reduction of hyperspectral images for high-throughput plastic characterization

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Chemometrics-assisted microfluidic paper-based analytical device for the determination of uric acid by silver nanoparticle plasmon resonance

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Multi-dimensional flow cytometry analysis reveals increasing changes in the systemic neutrophil compartment during seven consecutive days of endurance exercise

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Plants Know Where It Hurts: Root and Shoot Jasmonic Acid Induction Elicit Differential Responses in Brassica oleracea

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Novel data analysis method for multicolour flow cytometry links variability of multiple markers on single cells to a clinical phenotype

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Non-Invasive Monitoring of Inflammation in Inflammatory Bowel Disease Patients during Prolonged Exercise via Exhaled Breath Volatile Organic Compounds

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Metabolomic analysis of the interaction between plants and herbivores

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Field parasitism rates of caterpillars on Brassica oleracea plants are reliably predicted by differential attraction of Cotesia parasitoids

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Exhaled Breath Reflects Prolonged Exercise and Statin Use during a Field Campaign

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Preanalytical Pitfalls in Untargeted Plasma Nuclear Magnetic Resonance Metabolomics of Endocrine Hypertension

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Variable Selection in Untargeted Metabolomics and the Danger of Sparsity

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Stress-induced DNA methylation changes and their heritability in asexual dandelions

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Crossfit analysis: a novel method to characterize the dynamics of induced plant responses

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Fluorescence spectroscopy and chemometrics for simultaneous monitoring of cell concentration, chlorophyll and fatty acids in Nannochloropsis oceanica

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Multi-set Pre-processing of Multicolor Flow Cytometry Data

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A novel data fusion method for the effective analysis of multiple panels of flow cytometry data

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Automated flow cytometric identification of disease-specific cells by the ECLIPSE algorithm

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Novel chemistry of invasive plants: exotic species have more unique metabolomic profiles than native congeners

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