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ArticlesPeer ReviewedFull Text
Three previously unrecognised classes of biosynthetic enzymes revealed during the production of xenovulene A
Author / Creator:Schor, Raissa ; Schotte, Carsten ; Wibberg, Daniel ; Kalinowski, Jörn ; Cox, Russell J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2018-05, Vol.9 (1), p.1963-9, Article 1963
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A tale of two lineages: how the strains of the earliest divergent symbiotic Frankia clade spread over the world
Author / Creator:Berckx, Fede ; Nguyen, Thanh Van ; Bandong, Cyndi Mae ; Lin, Hsiao-Han ; Yamanaka, Takashi ; Katayama, Sae ; Wibberg, Daniel ; Blom, Jochen ; Kalinowski, Jörn ; Tateno, Masaki ; Simbahan, Jessica ; Liu, Chi-Te ; Brachmann, Andreas ; Pawlowski, Katharina
Publisher:London: BioMed Central Ltd
Journal title:BMC genomics, 2022-08, Vol.23 (1), p.1-602, Article 602
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Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species
Author / Creator:Adamek, Martina ; Alanjary, Mohammad ; Sales-Ortells, Helena ; Goodfellow, Michael ; Bull, Alan T. ; Winkler, Anika ; Wibberg, Daniel ; Kalinowski, Jörn ; Ziemert, Nadine
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2018-06, Vol.19 (1), p.426-15, Article 426
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Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory network in Corynebacterium glutamicum
Author / Creator:Busche, Tobias ; Šilar, Radoslav ; Pičmanová, Martina ; Pátek, Miroslav ; Kalinowski, Jörn
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-09, Vol.13 (1), p.445-445, Article 445
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Eliciting the silent lucensomycin biosynthetic pathway in Streptomyces cyanogenus S136 via manipulation of the global regulatory gene adpA
Author / Creator:Yushchuk, Oleksandr ; Ostash, Iryna ; Mösker, Eva ; Vlasiuk, Iryna ; Deneka, Maksym ; Rückert, Christian ; Busche, Tobias ; Fedorenko, Victor ; Kalinowski, Jörn ; Süssmuth, Roderich D. ; Ostash, Bohdan
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-02, Vol.11 (1), p.3507-14, Article 3507
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A paper-based, cell-free biosensor system for the detection of heavy metals and date rape drugs
Author / Creator:Gräwe, Alexander ; Dreyer, Anna ; Vornholt, Tobias ; Barteczko, Ursela ; Buchholz, Luzia ; Drews, Gila ; Ho, Uyen Linh ; Jackowski, Marta Eva ; Kracht, Melissa ; Lüders, Janina ; Bleckwehl, Tore ; Rositzka, Lukas ; Ruwe, Matthias ; Wittchen, Manuel ; Lutter, Petra ; Müller, Kristian ; Kalinowski, Jörn
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-03, Vol.14 (3), p.e0210940
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ArticlesPeer ReviewedFull Text
Estimation of pathogenic potential of an environmental Pseudomonas aeruginosa isolate using comparative genomics
Author / Creator:Berger, Carola ; Rückert, Christian ; Blom, Jochen ; Rabaey, Korneel ; Kalinowski, Jörn ; Rosenbaum, Miriam A.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-01, Vol.11 (1), p.1370-1370, Article 1370
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A flavin-dependent halogenase from metagenomic analysis prefers bromination over chlorination
Author / Creator:Neubauer, Pia R. ; Widmann, Christiane ; Wibberg, Daniel ; Schröder, Lea ; Frese, Marcel ; Kottke, Tilman ; Kalinowski, Jörn ; Niemann, Hartmut H. ; Sewald, Norbert
Publisher:United States: Public Library of Science
Journal title:PloS one, 2018-05, Vol.13 (5), p.e0196797-e0196797
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New natural products identified by combined genomics-metabolomics profiling of marine Streptomyces sp. MP131-18
Author / Creator:Paulus, Constanze ; Rebets, Yuriy ; Tokovenko, Bogdan ; Nadmid, Suvd ; Terekhova, Larisa P. ; Myronovskyi, Maksym ; Zotchev, Sergey B. ; Rückert, Christian ; Braig, Simone ; Zahler, Stefan ; Kalinowski, Jörn ; Luzhetskyy, Andriy
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-02, Vol.7 (1), p.42382-42382, Article 42382
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Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia
Author / Creator:Blifernez-Klassen, Olga ; Klassen, Viktor ; Wibberg, Daniel ; Cebeci, Enis ; Henke, Christian ; Rückert, Christian ; Chaudhari, Swapnil ; Rupp, Oliver ; Blom, Jochen ; Winkler, Anika ; Al-Dilaimi, Arwa ; Goesmann, Alexander ; Sczyrba, Alexander ; Kalinowski, Jörn ; Bräutigam, Andrea ; Kruse, Olaf
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-01, Vol.11 (1), p.1726-13, Article 1726
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ArticlesPeer ReviewedFull Text
Application of Next Generation Sequencing (NGS) in Phage Displayed Peptide Selection to Support the Identification of Arsenic-Binding Motifs
Author / Creator:Braun, Robert ; Schönberger, Nora ; Vinke, Svenja ; Lederer, Franziska ; Kalinowski, Jörn ; Pollmann, Katrin
Publisher:Switzerland: MDPI AG
Journal title:Viruses, 2020-11, Vol.12 (12), p.1360
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Metabolic survey of Botryococcus braunii: Impact of the physiological state on product formation
Author / Creator:Blifernez-Klassen, Olga ; Chaudhari, Swapnil ; Klassen, Viktor ; Wördenweber, Robin ; Steffens, Tim ; Cholewa, Dominik ; Niehaus, Karsten ; Kalinowski, Jörn ; Kruse, Olaf
Publisher:United States: Public Library of Science
Journal title:PloS one, 2018-06, Vol.13 (6), p.e0198976-e0198976
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Discovery and overproduction of novel highly bioactive pamamycins through transcriptional engineering of the biosynthetic gene cluster
Author / Creator:Eckert, Nikolas ; Rebets, Yuriy ; Horbal, Lilya ; Zapp, Josef ; Herrmann, Jennifer ; Busche, Tobias ; Müller, Rolf ; Kalinowski, Jörn ; Luzhetskyy, Andriy
Publisher:England: BioMed Central Ltd
Journal title:Microbial cell factories, 2023-11, Vol.22 (1), p.233-18, Article 233
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From waste to health-supporting molecules: biosynthesis of natural products from lignin-, plastic- and seaweed-based monomers using metabolically engineered Streptomyces lividans
Author / Creator:Seo, Kyoyoung ; Shu, Wei ; Rückert-Reed, Christian ; Gerlinger, Patrick ; Erb, Tobias J. ; Kalinowski, Jörn ; Wittmann, Christoph
Publisher:England: BioMed Central Ltd
Journal title:Microbial cell factories, 2023-12, Vol.22 (1), p.262-262, Article 262
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The colonic mucosa-associated microbiome in SIV infection: shift towards Bacteroidetes coincides with mucosal CD4+ T cell depletion and enterocyte damage
Author / Creator:Allers, Kristina ; Stahl-Hennig, Christiane ; Fiedler, Tomas ; Wibberg, Daniel ; Hofmann, Jörg ; Kunkel, Désirée ; Moos, Verena ; Kreikemeyer, Bernd ; Kalinowski, Jörn ; Schneider, Thomas
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-07, Vol.10 (1), p.10887-10887, Article 10887
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Assessing genetic diversity and similarity of 435 KPC-carrying plasmids
Author / Creator:Brandt, Christian ; Viehweger, Adrian ; Singh, Abhijeet ; Pletz, Mathias W. ; Wibberg, Daniel ; Kalinowski, Jörn ; Lerch, Sandrina ; Müller, Bettina ; Makarewicz, Oliwia
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-08, Vol.9 (1), p.11223-8, Article 11223
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Mutations within gene XNR_2147 for TetR-like protein enhance lincomycin resistance and endogenous specialized metabolism of Streptomyces albus J1074
Author / Creator:Tseduliak, Vasylyna-Marta ; Dolia, Borys ; Ostash, Iryna ; Lopatniuk, Maria ; Busche, Tobias ; Ochi, Kozo ; Kalinowski, Jörn ; Luzhetskyy, Andriy ; Fedorenko, Victor ; Ostash, Bohdan
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Journal of applied genetics, 2023-02, Vol.64 (1), p.185-195
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The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
Author / Creator:Schwientek, Patrick ; Szczepanowski, Rafael ; Rückert, Christian ; Kalinowski, Jörn ; Klein, Andreas ; Selber, Klaus ; Wehmeier, Udo F ; Stoye, Jens ; Pühler, Alfred
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-03, Vol.13 (1), p.112-112, Article 112
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Absence of the highly expressed small carbohydrate-binding protein Cgt improves the acarbose formation in Actinoplanes sp. SE50/110
Author / Creator:Schaffert, Lena ; Schneiker-Bekel, Susanne ; Gierhake, Jessica ; Droste, Julian ; Persicke, Marcus ; Rosen, Winfried ; Pühler, Alfred ; Kalinowski, Jörn
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Applied microbiology and biotechnology, 2020-06, Vol.104 (12), p.5395-5408
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Systems biology of industrial oxytetracycline production in Streptomyces rimosus: the secrets of a mutagenized hyperproducer
Author / Creator:Beganovic, Selma ; Rückert-Reed, Christian ; Sucipto, Hilda ; Shu, Wei ; Gläser, Lars ; Patschkowski, Thomas ; Struck, Ben ; Kalinowski, Jörn ; Luzhetskyy, Andriy ; Wittmann, Christoph
Publisher:London: BioMed Central Ltd
Journal title:Microbial cell factories, 2023-10, Vol.22 (1), p.1-222, Article 222
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Showing 1 to 20 of 220 results

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Three previously unrecognised classes of biosynthetic enzymes revealed during the production of xenovulene A

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A tale of two lineages: how the strains of the earliest divergent symbiotic Frankia clade spread over the world

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Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species

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Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory network in Corynebacterium glutamicum

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Eliciting the silent lucensomycin biosynthetic pathway in Streptomyces cyanogenus S136 via manipulation of the global regulatory gene adpA

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A paper-based, cell-free biosensor system for the detection of heavy metals and date rape drugs

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Estimation of pathogenic potential of an environmental Pseudomonas aeruginosa isolate using comparative genomics

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A flavin-dependent halogenase from metagenomic analysis prefers bromination over chlorination

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New natural products identified by combined genomics-metabolomics profiling of marine Streptomyces sp. MP131-18

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Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia

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Application of Next Generation Sequencing (NGS) in Phage Displayed Peptide Selection to Support the Identification of Arsenic-Binding Motifs

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Metabolic survey of Botryococcus braunii: Impact of the physiological state on product formation

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Discovery and overproduction of novel highly bioactive pamamycins through transcriptional engineering of the biosynthetic gene cluster

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From waste to health-supporting molecules: biosynthesis of natural products from lignin-, plastic- and seaweed-based monomers using metabolically engineered Streptomyces lividans

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The colonic mucosa-associated microbiome in SIV infection: shift towards Bacteroidetes coincides with mucosal CD4+ T cell depletion and enterocyte damage

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Assessing genetic diversity and similarity of 435 KPC-carrying plasmids

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Mutations within gene XNR_2147 for TetR-like protein enhance lincomycin resistance and endogenous specialized metabolism of Streptomyces albus J1074

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The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110

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Absence of the highly expressed small carbohydrate-binding protein Cgt improves the acarbose formation in Actinoplanes sp. SE50/110

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Systems biology of industrial oxytetracycline production in Streptomyces rimosus: the secrets of a mutagenized hyperproducer

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