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17 results for Khanal,+Sameer

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Time-course RNA-seq analysis of upland cotton (Gossypium hirsutum L.) responses to Southern root-knot nematode (Meloidogyne incognita) during compatible and incompatible interactions
Author / Creator:Khanal, Sameer ; Kumar, Pawan ; da Silva, Mychele B. ; Singh, Rippy ; Suassuna, Nelson ; Jones, Don C. ; Davis, Richard F. ; Chee, Peng W.
Publisher:England: BioMed Central
Journal title:BMC genomics, 2025-02, Vol.26 (1), p.183-20, Article 183
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Transcriptome analysis under pecan scab infection reveals the molecular mechanisms of the defense response in pecans
Author / Creator:Bhattarai, Gaurab ; Rhein, Hormat Shadgou ; Sreedasyam, Avinash ; Lovell, John T. ; Khanal, Sameer ; Grimwood, Jane ; Schmutz, Jeremy ; Jenkins, Jerry ; Chee, Peng W. ; Pisani, Cristina ; Randall, Jennifer ; Conner, Patrick J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2024-11, Vol.19 (11), p.e0313878
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Transcriptome analysis of a nematode resistant and susceptible upland cotton line at two critical stages of Meloidogyne incognita infection and development
Author / Creator:Kumar, Pawan ; Khanal, Sameer ; Da Silva, Mychele ; Singh, Rippy ; Davis, Richard F. ; Nichols, Robert L. ; Chee, Peng W.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-09, Vol.14 (9), p.e0221328-e0221328
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A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut
Author / Creator:Nagy, Ervin D ; Guo, Yufang ; Tang, Shunxue ; Bowers, John E ; Okashah, Rebecca A ; Taylor, Christopher A ; Zhang, Dong ; Khanal, Sameer ; Heesacker, Adam F ; Khalilian, Nelly ; Farmer, Andrew D ; Carrasquilla-Garcia, Noelia ; Penmetsa, R Varma ; Cook, Douglas ; Stalker, H Thomas ; Nielsen, Niels ; Ozias-Akins, Peggy ; Knapp, Steven J
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-09, Vol.13 (1), p.469-469, Article 469
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Genetic Analysis of Gossypium Fiber Quality Traits in Reciprocal Advanced Backcross Populations
Author / Creator:Chandnani, Rahul ; Kim, Changsoo ; Guo, Hui ; Shehzad, Tariq ; Wallace, Jason G. ; He, Daohua ; Zhang, Zhengsheng ; Patel, Jinesh D. ; Adhikari, Jeevan ; Khanal, Sameer ; Paterson, Andrew H.
Publisher:United States: Crop Science Society of America
Journal title:The plant genome, 2018-03, Vol.11 (1), p.1-15
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Molecular Dissection of Quantitative Variation in Bermudagrass Hybrids (Cynodon dactylon x transvaalensis): Morphological Traits
Author / Creator:Khanal, Sameer ; Dunne, Jeffrey C ; Schwartz, Brian M ; Kim, Changsoo ; Milla-Lewis, Susana ; Raymer, Paul L ; Hanna, Wayne W ; Adhikari, Jeevan ; Auckland, Susan A ; Rainville, Lisa ; Paterson, Andrew H
Publisher:Oxford: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2019-08, Vol.9 (8), p.2581-2596
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Comparative mapping in intraspecific populations uncovers a high degree of macrosynteny between A- and B-genome diploid species of peanut
Author / Creator:Guo, Yufang ; Khanal, Sameer ; Tang, Shunxue ; Bowers, John E ; Heesacker, Adam F ; Khalilian, Nelly ; Nagy, Ervin D ; Zhang, Dong ; Taylor, Christopher A ; Stalker, H Thomas ; Ozias-Akins, Peggy ; Knapp, Steven J
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-11, Vol.13 (1), p.608-608, Article 608
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Comparative transmission genetics of introgressed chromatin in reciprocal advanced backcross populations in Gossypium (cotton) polyploids
Author / Creator:Adhikari, Jeevan ; Chandnani, Rahul ; Vitrakoti, Deepak ; Khanal, Sameer ; Ployaram, Wiriyanat ; Paterson, Andrew H.
Publisher:England: Springer Nature B.V
Journal title:Heredity, 2023-04, Vol.130 (4), p.209-222
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Time-course RNA-seq analysis of upland cotton during compatible and incompatible interactions
Author / Creator:Khanal, Sameer ; Kumar, Pawan ; da Silva, Mychele B ; Singh, Rippy ; Suassuna, Nelson ; Jones, Don C ; Davis, Richard F ; Chee, Peng W
Publisher:BioMed Central Ltd
Journal title:BMC genomics, 2025-02, Vol.26 (1)
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Transcriptome analysis reveals genes potentially related to high fiber strength in a Gossypium hirsutum line IL9 with Gossypium mustelinum introgression
Author / Creator:Chen, Qi ; Wang, Wei ; Khanal, Sameer ; Han, Jinlei ; Zhang, Mi ; Chen, Yan ; Li, Zhenjiang ; Wang, Kai ; Paterson, Andrew H ; Yu, Jiwen ; Chee, Peng W ; Wang, Baohua
Publisher:1840 Woodward Drive, Suite 1, Ottawa, ON K2C 0P7: NRC Research Press
Journal title:Genome, 2021-11, Vol.64 (11), p.985-995
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SSR-enriched genetic linkage maps of bermudagrass
Author / Creator:Khanal, Sameer ; Kim, Changsoo ; Auckland, Susan A ; Rainville, Lisa K ; Adhikari, Jeevan ; Schwartz, Brian M ; Paterson, Andrew H
Publisher:Springer
Journal title:Theoretical and applied genetics, 2017-04, Vol.130 (4), p.819
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ArticlesPeer ReviewedFull Text
SSR-enriched genetic linkage maps of bermudagrass (Cynodon dactylon × transvaalensis), and their comparison with allied plant genomes
Author / Creator:Khanal, Sameer ; Kim, Changsoo ; Auckland, Susan A. ; Rainville, Lisa K. ; Adhikari, Jeevan ; Schwartz, Brian M. ; Paterson, Andrew H.
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Theoretical and applied genetics, 2017-04, Vol.130 (4), p.819-839
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ArticlesPeer ReviewedFull Text
Genome resources for three modern cotton lines guide future breeding efforts
Author / Creator:Sreedasyam, Avinash ; Lovell, John T. ; Mamidi, Sujan ; Khanal, Sameer ; Jenkins, Jerry W. ; Plott, Christopher ; Bryan, Kempton B. ; Li, Zhigang ; Shu, Shengqiang ; Carlson, Joseph ; Goodstein, David ; De Santiago, Luis ; Kirkbride, Ryan C. ; Calleja, Sebastian ; Campbell, Todd ; Koebernick, Jenny C. ; Dever, Jane K. ; Scheffler, Jodi A. ; Pauli, Duke ; Jenkins, Johnie N. ; McCarty, Jack C. ; Williams, Melissa ; Boston, LoriBeth ; Webber, Jenell ; Udall, Joshua A. ; Chen, Z. Jeffrey ; Bourland, Fred ; Stiller, Warwick N. ; Saski, Christopher A. ; Grimwood, Jane ; Chee, Peng W. ; Jones, Don C. ; Schmutz, Jeremy
Publisher:London: Nature Publishing Group UK
Journal title:Nature plants, 2024-06, Vol.10 (6), p.1039-1051
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ArticlesPeer ReviewedFull Text
Recombination is suppressed in an alien introgression in peanut harboring Rma, a dominant root-knot nematode resistance gene
Author / Creator:Nagy, Ervin D ; Chu, Ye ; Guo, Yufang ; Khanal, Sameer ; Tang, Shunxue ; Li, Yan ; Dong, Weibo B ; Timper, Patricia ; Taylor, Christopher ; Ozias-Akins, Peggy ; Corley Holbrook, C ; Beilinson, Vadim ; Nielsen, Niels C ; Thomas Stalker, H ; Knapp, Steven J
Publisher:Dordrecht: Dordrecht : Springer Netherlands
Journal title:Molecular breeding, 2010-08, Vol.26 (2), p.357-370
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ArticlesPeer ReviewedFull Text
Comparative genetic variation of fiber quality traits in reciprocal advanced backcross populations
Author / Creator:Chandnani, Rahul ; Zhang, Zhengsheng ; Patel, Jinesh D. ; Adhikari, Jeevan ; Khanal, Sameer ; He, Daohua ; Brown, Nino ; Chee, Peng W. ; Paterson, Andrew H.
Publisher:Dordrecht: Springer Netherlands
Journal title:Euphytica, 2017-11, Vol.213 (11), p.1-9, Article 241
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Targeted identification of association between cotton fiber quality traits and microsatellite markers
Author / Creator:Adhikari, Jeevan ; Das, Sayan ; Wang, Zining ; Khanal, Sameer ; Chandnani, Rahul ; Patel, Jinesh D. ; Goff, Valorie H. ; Auckland, Susan ; Rainville, Lisa K. ; Jones, Don ; Paterson, Andrew H.
Publisher:Dordrecht: Springer Netherlands
Journal title:Euphytica, 2017-03, Vol.213 (3), p.1, Article 65
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Cross-taxon application of sugarcane EST-SSR to genetic diversity analysis of bermudagrass (Cynodon spp.)
Author / Creator:Khanal, Sameer ; Schwartz, Brian M. ; Kim, Changsoo ; Adhikari, Jeevan ; Rainville, Lisa K. ; Auckland, Susan A. ; Paterson, Andrew H.
Publisher:Dordrecht: Springer Netherlands
Journal title:Genetic resources and crop evolution, 2017-12, Vol.64 (8), p.2059-2070
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Time-course RNA-seq analysis of upland cotton (Gossypium hirsutum L.) responses to Southern root-knot nematode (Meloidogyne incognita) during compatible and incompatible interactions

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Transcriptome analysis under pecan scab infection reveals the molecular mechanisms of the defense response in pecans

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Transcriptome analysis of a nematode resistant and susceptible upland cotton line at two critical stages of Meloidogyne incognita infection and development

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A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut

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Genetic Analysis of Gossypium Fiber Quality Traits in Reciprocal Advanced Backcross Populations

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Molecular Dissection of Quantitative Variation in Bermudagrass Hybrids (Cynodon dactylon x transvaalensis): Morphological Traits

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Comparative mapping in intraspecific populations uncovers a high degree of macrosynteny between A- and B-genome diploid species of peanut

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Comparative transmission genetics of introgressed chromatin in reciprocal advanced backcross populations in Gossypium (cotton) polyploids

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Time-course RNA-seq analysis of upland cotton during compatible and incompatible interactions

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Transcriptome analysis reveals genes potentially related to high fiber strength in a Gossypium hirsutum line IL9 with Gossypium mustelinum introgression

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SSR-enriched genetic linkage maps of bermudagrass

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SSR-enriched genetic linkage maps of bermudagrass (Cynodon dactylon × transvaalensis), and their comparison with allied plant genomes

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Genome resources for three modern cotton lines guide future breeding efforts

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Recombination is suppressed in an alien introgression in peanut harboring Rma, a dominant root-knot nematode resistance gene

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Comparative genetic variation of fiber quality traits in reciprocal advanced backcross populations

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Targeted identification of association between cotton fiber quality traits and microsatellite markers

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Cross-taxon application of sugarcane EST-SSR to genetic diversity analysis of bermudagrass (Cynodon spp.)

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