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ArticlesPeer ReviewedFull Text
Plasmids, prophages, and defense systems are depleted from plant microbiota genomes
Author / Creator:Bograd, Avi ; Oppenheimer-Shaanan, Yaara ; Levy, Asaf
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2025-06, Vol.26 (1), p.163-12
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ArticlesPeer ReviewedFull Text
Identification of type VI secretion system effector-immunity pairs using structural bioinformatics
Author / Creator:Geller, Alexander M ; Shalom, Maor ; Zlotkin, David ; Blum, Noam ; Levy, Asaf
Publisher:London: Nature Publishing Group UK
Journal title:Molecular systems biology, 2024-06, Vol.20 (6), p.702-718
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ArticlesPeer ReviewedFull Text
High-resolution phylogenetic microbial community profiling
Author / Creator:Singer, Esther ; Bushnell, Brian ; Coleman-Derr, Devin ; Bowman, Brett ; Bowers, Robert M ; Levy, Asaf ; Gies, Esther A ; Cheng, Jan-Fang ; Copeland, Alex ; Klenk, Hans-Peter ; Hallam, Steven J ; Hugenholtz, Philip ; Tringe, Susannah G ; Woyke, Tanja
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2016-08, Vol.10 (8), p.2020-2032
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ArticlesPeer ReviewedFull Text
The extracellular contractile injection system is enriched in environmental microbes and associates with numerous toxins
Author / Creator:Geller, Alexander Martin ; Pollin, Inbal ; Zlotkin, David ; Danov, Aleks ; Nachmias, Nimrod ; Andreopoulos, William B. ; Shemesh, Keren ; Levy, Asaf
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-06, Vol.12 (1), p.3743-3743, Article 3743
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ArticlesPeer ReviewedFull Text
Identification of novel toxins associated with the extracellular contractile injection system using machine learning
Author / Creator:Danov, Aleks ; Pollin, Inbal ; Moon, Eric ; Ho, Mengfei ; Wilson, Brenda A ; Papathanos, Philippos A ; Kaplan, Tommy ; Levy, Asaf
Publisher:London: Nature Publishing Group UK
Journal title:Molecular systems biology, 2024-08, Vol.20 (8), p.859-879
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ArticlesPeer ReviewedFull Text
MicroRNAs accurately identify cancer tissue origin
Author / Creator:Rosenfeld, Nitzan ; Aharonov, Ranit ; Meiri, Eti ; Rosenwald, Shai ; Spector, Yael ; Zepeniuk, Merav ; Benjamin, Hila ; Shabes, Norberto ; Tabak, Sarit ; Levy, Asaf ; Lebanony, Danit ; Goren, Yaron ; Silberschein, Erez ; Targan, Nurit ; Ben-Ari, Alex ; Gilad, Shlomit ; Sion-Vardy, Netta ; Tobar, Ana ; Feinmesser, Meora ; Kharenko, Oleg ; Nativ, Ofer ; Nass, Dvora ; Perelman, Marina ; Yosepovich, Ady ; Shalmon, Bruria ; Polak-Charcon, Sylvie ; Fridman, Eddie ; Avniel, Amir ; Bentwich, Isaac ; Bentwich, Zvi ; Cohen, Dalia ; Chajut, Ayelet ; Barshack, Iris
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2008-04, Vol.26 (4), p.462-469
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ArticlesPeer ReviewedFull Text
Cell-Cell Signaling Proteobacterial LuxR Solos: a Treasure Trove of Subgroups Having Different Origins, Ligands, and Ecological Roles
Author / Creator:Bez, Cristina ; Geller, Alexander Martin ; Levy, Asaf ; Venturi, Vittorio
Publisher:United States: American Society for Microbiology
Journal title:mSystems, 2023-04, Vol.8 (2), p.e0103922-e0103922
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ArticlesPeer ReviewedFull Text
Comprehensive Gene and microRNA Expression Profiling Reveals a Role for microRNAs in Human Liver Development
Author / Creator:Tzur, Galit ; Israel, Ariel ; Levy, Asaf ; Benjamin, Hila ; Meiri, Eti ; Shufaro, Yoel ; Meir, Karen ; Khvalevsky, Elina ; Spector, Yael ; Rojansky, Nathan ; Bentwich, Zvi ; Reubinoff, Benjamin E. ; Galun, Eithan
Publisher:United States: Public Library of Science
Journal title:PloS one, 2009-10, Vol.4 (10), p.e7511-e7511
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ArticlesPeer ReviewedFull Text
MicroRNA Expression Patterns and Function in Endodermal Differentiation of Human Embryonic Stem Cells
Author / Creator:Tzur, Galit ; Levy, Asaf ; Meiri, Eti ; Barad, Omer ; Spector, Yael ; Bentwich, Zvi ; Mizrahi, Lina ; Katzenellenbogen, Mark ; Ben-Shushan, Etti ; Reubinoff, Benjamin E. ; Galun, Eithan
Publisher:United States: Public Library of Science
Journal title:PloS one, 2008-11, Vol.3 (11), p.e3726-e3726
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ArticlesPeer ReviewedFull Text
Transcriptome Profiling of Khat (Catha edulis) and Ephedra sinica Reveals Gene Candidates Potentially Involved in Amphetamine-Type Alkaloid Biosynthesis
Author / Creator:Groves, Ryan A. ; Hagel, Jillian M. ; Zhang, Ye ; Kilpatrick, Korey ; Levy, Asaf ; Marsolais, Frédéric ; Lewinsohn, Efraim ; Sensen, Christoph W. ; Facchini, Peter J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-03, Vol.10 (3), p.e0119701-e0119701
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ArticlesPeer ReviewedFull Text
Hybrid structural electronics printing by novel dry film stereolithography and laser induced forward transfer
Author / Creator:Levy, Asaf ; Bernstein Toker, Gil ; Winter, Shoshana ; Cohen, Sharona S. ; Ermak, Oleg ; Peled, Itay ; Kotler, Zvi ; Gelbstein, Yaniv
Publisher:Weinheim: John Wiley & Sons, Inc
Journal title:Nano select, 2021-05, Vol.2 (5), p.979-991
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ArticlesPeer ReviewedFull Text
CRISPR adaptation biases explain preference for acquisition of foreign DNA
Author / Creator:Levy, Asaf ; Goren, Moran G. ; Yosef, Ido ; Auster, Oren ; Manor, Miriam ; Amitai, Gil ; Edgar, Rotem ; Qimron, Udi ; Sorek, Rotem
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2015-04, Vol.520 (7548), p.505-510
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Newspaper ArticlesFull Text
Dream trip that ended in tragedy: Daily Edition
Author / Creator:Lazaroff, Tovah
Publisher:Jerusalem: The Jerusalem Post Ltd
Journal title:The Jerusalem post, 2005-01-02
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ArticlesPeer ReviewedFull Text
Genomic features of bacterial adaptation to plants
Author / Creator:Levy, Asaf ; Salas Gonzalez, Isai ; Mittelviefhaus, Maximilian ; Clingenpeel, Scott ; Herrera Paredes, Sur ; Miao, Jiamin ; Wang, Kunru ; Devescovi, Giulia ; Stillman, Kyra ; Monteiro, Freddy ; Rangel Alvarez, Bryan ; Lundberg, Derek S. ; Lu, Tse-Yuan ; Lebeis, Sarah ; Jin, Zhao ; McDonald, Meredith ; Klein, Andrew P. ; Feltcher, Meghan E. ; Rio, Tijana Glavina ; Grant, Sarah R. ; Doty, Sharon L. ; Ley, Ruth E. ; Zhao, Bingyu ; Venturi, Vittorio ; Pelletier, Dale A. ; Vorholt, Julia A. ; Tringe, Susannah G. ; Woyke, Tanja ; Dangl, Jeffery L.
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2017-12, Vol.50 (1), p.138-150
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ArticlesPeer ReviewedFull Text
Widespread horizontal gene transfer between plants and bacteria
Author / Creator:Haimlich, Shelly ; Fridman, Yulia ; Khandal, Hitaishi ; Savaldi-Goldstein, Sigal ; Levy, Asaf
Publisher:England: Oxford University Press
Journal title:ISME Communications, 2024-01, Vol.4 (1), p.ycae073-ycae073
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ArticlesPeer ReviewedFull Text
Vaccinia virus infection suppresses the cell microRNA machinery
Author / Creator:Grinberg, Moran ; Gilad, Shlomit ; Meiri, Eti ; Levy, Asaf ; Isakov, Ofer ; Ronen, Roy ; Shomron, Noam ; Bentwich, Zvi ; Shemer-Avni, Yonat
Publisher:Vienna: Springer Vienna
Journal title:Archives of virology, 2012-09, Vol.157 (9), p.1719-1727
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ArticlesPeer ReviewedFull Text
Natural selection underlies apparent stress-induced mutagenesis in a bacteriophage infection model
Author / Creator:Yosef, Ido ; Edgar, Rotem ; Levy, Asaf ; Amitai, Gil ; Sorek, Rotem ; Munitz, Ariel ; Qimron, Udi
Publisher:London: Nature Publishing Group UK
Journal title:Nature microbiology, 2016-04, Vol.1 (6), p.16047-16047, Article 16047
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ArticlesFull Text
Plasmids, Prophages and Defense Systems are Depleted from Plant Microbiota Genomes
Author / Creator:Bograd, Avi ; Oppenheimer-Shaanan, Yaara ; Levy, Asaf
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2024-11
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ArticlesPeer ReviewedFull Text
Transcriptome Profiling of Khat (Catha edulis) and Ephedra sinica Reveals Gene Candidates Potentially Involved in Amphetamine-Type Alkaloid Biosynthesis: e0119701
Author / Creator:Groves, Ryan A ; Hagel, Jillian M ; Zhang, Ye ; Kilpatrick, Korey ; Levy, Asaf ; Marsolais, Frederic ; Lewinsohn, Efraim ; Sensen, Christoph W ; Facchini, Peter J
Journal title:PloS one, 2015-03, Vol.10 (3)
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ArticlesFull Text
Large-scale discovery of candidate type VI secretion effectors with antibacterial activity
Author / Creator:Alexander Martin Geller ; Zlotkin, David ; Levy, Asaf
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-10
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Showing 1 to 20 of 25 results

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Plasmids, prophages, and defense systems are depleted from plant microbiota genomes

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Identification of type VI secretion system effector-immunity pairs using structural bioinformatics

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High-resolution phylogenetic microbial community profiling

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The extracellular contractile injection system is enriched in environmental microbes and associates with numerous toxins

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Identification of novel toxins associated with the extracellular contractile injection system using machine learning

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MicroRNAs accurately identify cancer tissue origin

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Cell-Cell Signaling Proteobacterial LuxR Solos: a Treasure Trove of Subgroups Having Different Origins, Ligands, and Ecological Roles

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Comprehensive Gene and microRNA Expression Profiling Reveals a Role for microRNAs in Human Liver Development

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MicroRNA Expression Patterns and Function in Endodermal Differentiation of Human Embryonic Stem Cells

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Transcriptome Profiling of Khat (Catha edulis) and Ephedra sinica Reveals Gene Candidates Potentially Involved in Amphetamine-Type Alkaloid Biosynthesis

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Hybrid structural electronics printing by novel dry film stereolithography and laser induced forward transfer

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CRISPR adaptation biases explain preference for acquisition of foreign DNA

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Dream trip that ended in tragedy: Daily Edition

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Genomic features of bacterial adaptation to plants

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Widespread horizontal gene transfer between plants and bacteria

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Vaccinia virus infection suppresses the cell microRNA machinery

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Natural selection underlies apparent stress-induced mutagenesis in a bacteriophage infection model

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Plasmids, Prophages and Defense Systems are Depleted from Plant Microbiota Genomes

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Transcriptome Profiling of Khat (Catha edulis) and Ephedra sinica Reveals Gene Candidates Potentially Involved in Amphetamine-Type Alkaloid Biosynthesis: e0119701

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Large-scale discovery of candidate type VI secretion effectors with antibacterial activity

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