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ArticlesPeer ReviewedFull Text
Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
Author / Creator:Akhmedov, Murodzhon ; Martinelli, Axel ; Geiger, Roger ; Kwee, Ivo
Publisher:England: Oxford University Press
Journal title:NAR genomics and bioinformatics, 2020-03, Vol.2 (1), p.lqz019-lqz019
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The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery
Author / Creator:Laing, Roz ; Kikuchi, Taisei ; Martinelli, Axel ; Tsai, Isheng J ; Beech, Robin N ; Redman, Elizabeth ; Holroyd, Nancy ; Bartley, David J ; Beasley, Helen ; Britton, Collette ; Curran, David ; Devaney, Eileen ; Gilabert, Aude ; Hunt, Martin ; Jackson, Frank ; Johnston, Stephanie L ; Kryukov, Ivan ; Li, Keyu ; Morrison, Alison A ; Reid, Adam J ; Sargison, Neil ; Saunders, Gary I ; Wasmuth, James D ; Wolstenholme, Adrian ; Berriman, Matthew ; Gilleard, John S ; Cotton, James A
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology (Online Edition), 2013-08, Vol.14 (8), p.R88-3153, Article R88
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Population genomic and evolutionary modelling analyses reveal a single major QTL for ivermectin drug resistance in the pathogenic nematode, Haemonchus contortus
Author / Creator:Doyle, Stephen R. ; Illingworth, Christopher J. R. ; Laing, Roz ; Bartley, David J. ; Redman, Elizabeth ; Martinelli, Axel ; Holroyd, Nancy ; Morrison, Alison A. ; Rezansoff, Andrew ; Tracey, Alan ; Devaney, Eileen ; Berriman, Matthew ; Sargison, Neil ; Cotton, James A. ; Gilleard, John S.
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2019-03, Vol.20 (1), p.218-19, Article 218
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A single test approach for accurate and sensitive detection and taxonomic characterization of Trypanosomes by comprehensive analysis of internal transcribed spacer 1 amplicons
Author / Creator:Gaithuma, Alex Kiarie ; Yamagishi, Junya ; Martinelli, Axel ; Hayashida, Kyoko ; Kawai, Naoko ; Marsela, Megasari ; Sugimoto, Chihiro
Publisher:United States: Public Library of Science
Journal title:PLoS neglected tropical diseases, 2019-02, Vol.13 (2), p.e0006842
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Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm
Author / Creator:Doyle, Stephen R. ; Tracey, Alan ; Laing, Roz ; Holroyd, Nancy ; Bartley, David ; Bazant, Wojtek ; Beasley, Helen ; Beech, Robin ; Britton, Collette ; Brooks, Karen ; Chaudhry, Umer ; Maitland, Kirsty ; Martinelli, Axel ; Noonan, Jennifer D. ; Paulini, Michael ; Quail, Michael A. ; Redman, Elizabeth ; Rodgers, Faye H. ; Sallé, Guillaume ; Shabbir, Muhammad Zubair ; Sankaranarayanan, Geetha ; Wit, Janneke ; Howe, Kevin L. ; Sargison, Neil ; Devaney, Eileen ; Berriman, Matthew ; Gilleard, John S. ; Cotton, James A.
Publisher:London: Nature Publishing Group UK
Journal title:Communications biology, 2020-11, Vol.3 (1), p.656-656, Article 656
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Experimental evolution, genetic analysis and genome re-sequencing reveal the mutation conferring artemisinin resistance in an isogenic lineage of malaria parasites
Author / Creator:Hunt, Paul ; Martinelli, Axel ; Modrzynska, Katarzyna ; Borges, Sofia ; Creasey, Alison ; Rodrigues, Louise ; Beraldi, Dario ; Loewe, Laurence ; Fawcett, Richard ; Kumar, Sujai ; Thomson, Marian ; Trivedi, Urmi ; Otto, Thomas D ; Pain, Arnab ; Blaxter, Mark ; Cravo, Pedro
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2010-09, Vol.11 (1), p.499-499
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Upregulated expression of the antioxidant sestrin 2 identified by transcriptomic analysis of Japanese encephalitis virus-infected SH-SY5Y neuroblastoma cells
Author / Creator:Carr, Michael ; Gonzalez, Gabriel ; Martinelli, Axel ; Wastika, Christida E. ; Ito, Kimihito ; Orba, Yasuko ; Sasaki, Michihito ; Hall, William W. ; Sawa, Hirofumi
Publisher:New York: Springer US
Journal title:Virus genes, 2019-10, Vol.55 (5), p.630-642
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Rapid identification of genes controlling virulence and immunity in malaria parasites
Author / Creator:Abkallo, Hussein M. ; Martinelli, Axel ; Inoue, Megumi ; Ramaprasad, Abhinay ; Xangsayarath, Phonepadith ; Gitaka, Jesse ; Tang, Jianxia ; Yahata, Kazuhide ; Zoungrana, Augustin ; Mitaka, Hayato ; Acharjee, Arita ; Datta, Partha P. ; Hunt, Paul ; Carter, Richard ; Kaneko, Osamu ; Mustonen, Ville ; Illingworth, Christopher J. R. ; Pain, Arnab ; Culleton, Richard
Publisher:United States: Public Library of Science
Journal title:PLoS pathogens, 2017-07, Vol.13 (7), p.e1006447
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Human cytochrome P450 2B6 genetic variability in Botswana: a case of haplotype diversity and convergent phenotypes
Author / Creator:Tawe, Leabaneng ; Motshoge, Thato ; Ramatlho, Pleasure ; Mutukwa, Naledi ; Muthoga, Charles Waithaka ; Dongho, Ghyslaine Bruna Djeunang ; Martinelli, Axel ; Peloewetse, Elias ; Russo, Gianluca ; Quaye, Isaac Kweku ; Paganotti, Giacomo Maria
Publisher:London: Springer Science and Business Media LLC
Journal title:Scientific Reports, 2018-03, Vol.8 (1), p.4912-9, Article 4912
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Quantitative genome re-sequencing defines multiple mutations conferring chloroquine resistance in rodent malaria
Author / Creator:Kinga Modrzynska, Katarzyna ; Creasey, Alison ; Loewe, Laurence ; Cezard, Timothee ; Trindade Borges, Sofia ; Martinelli, Axel ; Rodrigues, Louise ; Cravo, Pedro ; Blaxter, Mark ; Carter, Richard ; Hunt, Paul
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-03, Vol.13 (1), p.106-106, Article 106
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Geographic Structuring of the Plasmodium falciparum Sarco(endo)plasmic Reticulum Ca2+ ATPase (PfSERCA) Gene Diversity
Author / Creator:Jambou, Ronan ; Martinelli, Axel ; Pinto, João ; Gribaldo, Simonetta ; Legrand, Eric ; Niang, Makhtar ; Kim, Nimol ; Pharath, Lim ; Volnay, Béatrice ; Ekala, Marie Therese ; Bouchier, Christiane ; Fandeur, Thierry ; Berzosa, Pedro ; Benito, Agustin ; Ferreira, Isabel Dinis ; Ferreira, Cynthia ; Vieira, Pedro Paulo ; Alecrim, Maria das Graças ; Mercereau-Puijalon, Odile ; Cravo, Pedro
Publisher:United States: Public Library of Science
Journal title:PloS one, 2010-02, Vol.5 (2), p.e9424-e9424
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Non-human primate malaria parasites: out of the forest and into the laboratory
Author / Creator:MARTINELLI, AXEL ; CULLETON, RICHARD
Publisher:Cambridge, UK: Cambridge University Press
Journal title:Parasitology, 2018-01, Vol.145 (1), p.41-54
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A Genetic Approach to the de novo Identification of Targets of Strain-Specific Immunity in Malaria Parasites
Author / Creator:Martinelli, Axel ; Cheesman, Sandra ; Hunt, Paul ; Culleton, Richard ; Raza, Ahmed ; Mackinnon, Margaret ; Carter, Richard ; Miller, Louis H.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2005-01, Vol.102 (3), p.814-819
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Experimental Evolution of Resistance to Artemisinin Combination Therapy Results in Amplification of the mdr1 Gene in a Rodent Malaria Parasite
Author / Creator:Rodrigues, Louise A. ; Henriques, Gisela ; Borges, Sofia T. ; Hunt, Paul ; Sanchez, Cecília P. ; Martinelli, Axel ; Cravo, Pedro
Publisher:United States: Public Library of Science
Journal title:PloS one, 2010-07, Vol.5 (7), p.e11593-e11593
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Non-human Primate Malaria Parasites: out of the forest and into the laboratory – CORRIGENDUM
Author / Creator:MARTINELLI, AXEL ; CULLETON, RICHARD
Publisher:England: Cambridge University Press
Journal title:Parasitology, 2018-01, Vol.145 (1), p.55-55
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Identification of genetic markers of resistance to Artemisinin Combination Therapy in the rodent model Plasmodium chabaudi
Author / Creator:Rodrigues, Louise A ; Henriques, Gisela ; Borges, Sofia T ; Hunt, Paul ; Sanchez, Cecília P ; Martinelli, Axel ; Cravo, Pedro
Publisher:London: BioMed Central
Journal title:Malaria journal, 2010-10, Vol.9 (S2), p.1-26, Article O26
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Profiling microRNAs through development of the parasitic nematode Haemonchus identifies nematode-specific miRNAs that suppress larval development
Author / Creator:Marks, Neil D. ; Winter, Alan D. ; Gu, Henry Y. ; Maitland, Kirsty ; Gillan, Victoria ; Ambroz, Martin ; Martinelli, Axel ; Laing, Roz ; MacLellan, Rachel ; Towne, Jessica ; Roberts, Brett ; Hanks, Eve ; Devaney, Eileen ; Britton, Collette
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-11, Vol.9 (1), p.17594-15, Article 17594
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A single test approach for accurate and sensitive detection and taxonomic characterization of Trypanosomes by comprehensive analysis of ITS1 amplicons
Author / Creator:Gaithuma, Alex Kiarie ; Yamagishi, Junya ; Martinelli, Axel ; Hayashida, Kyoko ; Kawai, Naoko ; Megasari Marsela ; Sugimoto, Chihiro
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-09
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metaLINCS: an R package for meta-level analysis of LINCS L1000 drug signatures using stratified connectivity mapping
Author / Creator:Kwee, Ivo ; Martinelli, Axel ; Khayal, Layal Abo ; Akhmedov, Murodzhon
Publisher:England: Oxford University Press
Journal title:Bioinformatics advances, 2022, Vol.2 (1), p.vbac064-vbac064
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Association of CYP2B6 Genetic Variation with Efavirenz and Nevirapine Drug Resistance in HIV-1 Patients from Botswana
Author / Creator:Maseng, Monkgomotsi J ; Tawe, Leabaneng ; Thami, Prisca K ; Seatla, Kaelo K ; Moyo, Sikhulile ; Martinelli, Axel ; Kasvosve, Ishmael ; Novitsky, Vladimir ; Essex, Max ; Russo, Gianluca ; Gaseitsiwe, Simani ; Paganotti, Giacomo M
Publisher:New Zealand: Dove Medical Press Limited
Journal title:Pharmacogenomics and personalized medicine, 2021-01, Vol.14, p.335-347
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Showing 1 to 20 of 30 results

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Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data

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The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery

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Population genomic and evolutionary modelling analyses reveal a single major QTL for ivermectin drug resistance in the pathogenic nematode, Haemonchus contortus

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A single test approach for accurate and sensitive detection and taxonomic characterization of Trypanosomes by comprehensive analysis of internal transcribed spacer 1 amplicons

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Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm

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Experimental evolution, genetic analysis and genome re-sequencing reveal the mutation conferring artemisinin resistance in an isogenic lineage of malaria parasites

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Upregulated expression of the antioxidant sestrin 2 identified by transcriptomic analysis of Japanese encephalitis virus-infected SH-SY5Y neuroblastoma cells

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Rapid identification of genes controlling virulence and immunity in malaria parasites

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Human cytochrome P450 2B6 genetic variability in Botswana: a case of haplotype diversity and convergent phenotypes

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Quantitative genome re-sequencing defines multiple mutations conferring chloroquine resistance in rodent malaria

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Geographic Structuring of the Plasmodium falciparum Sarco(endo)plasmic Reticulum Ca2+ ATPase (PfSERCA) Gene Diversity

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Non-human primate malaria parasites: out of the forest and into the laboratory

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A Genetic Approach to the de novo Identification of Targets of Strain-Specific Immunity in Malaria Parasites

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Experimental Evolution of Resistance to Artemisinin Combination Therapy Results in Amplification of the mdr1 Gene in a Rodent Malaria Parasite

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Non-human Primate Malaria Parasites: out of the forest and into the laboratory – CORRIGENDUM

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Identification of genetic markers of resistance to Artemisinin Combination Therapy in the rodent model Plasmodium chabaudi

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Profiling microRNAs through development of the parasitic nematode Haemonchus identifies nematode-specific miRNAs that suppress larval development

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A single test approach for accurate and sensitive detection and taxonomic characterization of Trypanosomes by comprehensive analysis of ITS1 amplicons

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metaLINCS: an R package for meta-level analysis of LINCS L1000 drug signatures using stratified connectivity mapping

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Association of CYP2B6 Genetic Variation with Efavirenz and Nevirapine Drug Resistance in HIV-1 Patients from Botswana

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