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ArticlesPeer ReviewedFull Text
Structures of yeast mitochondrial ADP/ATP carriers support a domain-based alternating-access transport mechanism
Author / Creator:Ruprecht, Jonathan J. ; Hellawell, Alex M. ; Harding, Marilyn ; Crichton, Paul G. ; McCoy, Airlie J. ; Kunji, Edmund R. S.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2014-01, Vol.111 (4), p.E426-E434
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ArticlesPeer ReviewedFull Text
High-resolution structure prediction and the crystallographic phase problem
Author / Creator:Qian, Bin ; Raman, Srivatsan ; Das, Rhiju ; Bradley, Philip ; McCoy, Airlie J. ; Read, Randy J. ; Baker, David
Publisher:London: Nature Publishing Group UK
Journal title:Nature, 2007-11, Vol.450 (7167), p.259-264
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ArticlesPeer ReviewedFull Text
A structural explanation for the binding of endocytic dileucine motifs by the AP2 complex
Author / Creator:Kelly, Bernard T. ; McCoy, Airlie J. ; Späte, Kira ; Miller, Sharon E. ; Evans, Philip R. ; Höning, Stefan ; Owen, David J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature, 2008-12, Vol.456 (7224), p.976-979
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ArticlesPeer ReviewedFull Text
A SNARE–adaptor interaction is a new mode of cargo recognition in clathrin-coated vesicles
Author / Creator:Miller, Sharon E. ; Collins, Brett M. ; McCoy, Airlie J. ; Robinson, Margaret S. ; Owen, David J.
Publisher:London: Nature Publishing
Journal title:Nature, 2007-11, Vol.450 (7169), p.570-574
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ArticlesPeer ReviewedFull Text
AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination
Author / Creator:Terwilliger, Thomas C. ; Liebschner, Dorothee ; Croll, Tristan I. ; Williams, Christopher J. ; McCoy, Airlie J. ; Poon, Billy K. ; Afonine, Pavel V. ; Oeffner, Robert D. ; Richardson, Jane S. ; Read, Randy J. ; Adams, Paul D.
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2024-01, Vol.21 (1), p.110-116
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ArticlesPeer ReviewedFull Text
Ab initio solution of macromolecular crystal structures without direct methods
Author / Creator:McCoy, Airlie J. ; Oeffner, Robert D. ; Wrobel, Antoni G. ; Ojala, Juha R. M. ; Tryggvason, Karl ; Lohkamp, Bernhard ; Read, Randy J.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2017-04, Vol.114 (14), p.3637-3641
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ArticlesPeer ReviewedFull Text
X-ray structure determination using low-resolution electron microscopy maps for molecular replacement
Author / Creator:Jackson, Ryan N ; McCoy, Airlie J ; Terwilliger, Thomas C ; Read, Randy J ; Wiedenheft, Blake
Publisher:London: Nature Publishing Group UK
Journal title:Nature protocols, 2015-09, Vol.10 (9), p.1275-1284
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ArticlesPeer ReviewedFull Text
Macromolecular X-ray structure determination using weak, single-wavelength anomalous data
Author / Creator:Bunkóczi, Gábor ; McCoy, Airlie J ; Echols, Nathaniel ; Grosse-Kunstleve, Ralf W ; Adams, Paul D ; Holton, James M ; Read, Randy J ; Terwilliger, Thomas C
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2015-02, Vol.12 (2), p.127-130
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ArticlesFull Text
AlphaFold as a Prior: Experimental Structure Determination Conditioned on a Pretrained Neural Network
Author / Creator:Fadini, Alisia ; Li, Minhuan ; Mccoy, Airlie J ; Terwilliger, Thomas C ; Read, Randy J ; Hekstra, Doeke R ; Alquraishi, Mohammed
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2025-02
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ArticlesFull Text
Likelihood-based docking of models into cryo-EM maps
Author / Creator:Millan, Claudia ; Mccoy, Airlie J ; Terwilliger, Thomas C ; Read, Randy J
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2023-02
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ArticlesFull Text
Likelihood-based signal and noise analysis for docking of models into cryo-EM maps
Author / Creator:Read, Randy J ; Millan, Claudia ; Mccoy, Airlie J ; Terwilliger, Thomas C
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2023-02
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ArticlesFull Text
Assessing the utility of CASP14 models for molecular replacement
Author / Creator:Millán, Claudia ; Keegan, Ronan M ; Pereira, Joana ; Sammito, Massimo D ; Simpkin, Adam J ; Mccoy, Airlie J ; Lupas, Andrei N ; Hartmann, Marcus D ; Rigden, Daniel J ; Read, Randy J
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-06
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ArticlesPeer ReviewedFull Text
Structures of yeast mitochondrial ADP/ATP carriers support a domain-based alternating-access transport mechanism
Author / Creator:Ruprecht, Jonathan J. ; Hellawell, Alex M. ; Harding, Marilyn ; Crichton, Paul G. ; McCoy, Airlie J. ; Kunji, Edmund R. S.
Publisher:National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2014-01, Vol.111 (4), p.1235-1235
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ArticlesPeer ReviewedFull Text
High resolution protein structure prediction and the crystallographic phase problem
Author / Creator:Qian, Bin ; Raman, Srivatsan ; Das, Rhiju ; Bradley, Philip ; McCoy, Airlie J. ; Read, Randy J. ; Baker, David
Journal title:Nature (London), 2007-10, Vol.450 (7167), p.259-264
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ArticlesFull Text
Likelihood-based estimation of substructure content from single-wavelength anomalous diffraction (SAD) intensity data
Author / Creator:Hatti, Kaushik S ; Mccoy, Airlie J ; Read, Randy J
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-02
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ArticlesFull Text
Accelerating crystal structure determination with iterative AlphaFold prediction
Author / Creator:Terwilliger, Thomas C ; Afonine, Pavel V ; Liebschner, Dorothee ; Croll, Tristan I ; Mccoy, A J ; Oeffner, Robert D ; Williams, Christopher J ; Poon, Billy K ; Richardson, Jane S ; Read, Randy J ; Adams, Paul D
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-11
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ArticlesPeer ReviewedFull Text
Structural basis for dimerization of the Dictyostelium gelation factor (ABP120) rod
Author / Creator:McCoy, Airlie J. ; Fucini, Paola ; Noegel, Angelika A. ; Stewart, Murray
Publisher:New York: Nature Publishing Group US
Journal title:Nature Structural Biology, 1999-09, Vol.6 (9), p.836-841
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ArticlesPeer ReviewedFull Text
Structural basis for amoeboid motility in nematode sperm
Author / Creator:Bullock, Timothy L. ; McCoy, Airlie J. ; Kent, Helen M. ; Roberts, Thomas M. ; Stewart, Murray
Publisher:New York: Nature Publishing Group US
Journal title:Nature Structural Biology, 1998-03, Vol.5 (3), p.184-189
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Structures of yeast mitochondrial ADP/ATP carriers support a domain-based alternating-access transport mechanism

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High-resolution structure prediction and the crystallographic phase problem

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A structural explanation for the binding of endocytic dileucine motifs by the AP2 complex

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A SNARE–adaptor interaction is a new mode of cargo recognition in clathrin-coated vesicles

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AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination

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Ab initio solution of macromolecular crystal structures without direct methods

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X-ray structure determination using low-resolution electron microscopy maps for molecular replacement

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Macromolecular X-ray structure determination using weak, single-wavelength anomalous data

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AlphaFold as a Prior: Experimental Structure Determination Conditioned on a Pretrained Neural Network

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Likelihood-based docking of models into cryo-EM maps

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Likelihood-based signal and noise analysis for docking of models into cryo-EM maps

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Assessing the utility of CASP14 models for molecular replacement

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Structures of yeast mitochondrial ADP/ATP carriers support a domain-based alternating-access transport mechanism

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High resolution protein structure prediction and the crystallographic phase problem

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Likelihood-based estimation of substructure content from single-wavelength anomalous diffraction (SAD) intensity data

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Accelerating crystal structure determination with iterative AlphaFold prediction

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Structural basis for dimerization of the Dictyostelium gelation factor (ABP120) rod

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Structural basis for amoeboid motility in nematode sperm

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