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30 results for Natsume,+Satoshi

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ArticlesPeer ReviewedFull Text
Genome sequencing reveals agronomically important loci in rice using MutMap
Author / Creator:Abe, Akira ; Kosugi, Shunichi ; Yoshida, Kentaro ; Natsume, Satoshi ; Takagi, Hiroki ; Kanzaki, Hiroyuki ; Matsumura, Hideo ; Yoshida, Kakoto ; Mitsuoka, Chikako ; Tamiru, Muluneh ; Innan, Hideki ; Cano, Liliana ; Kamoun, Sophien ; Terauchi, Ryohei
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2012-02, Vol.30 (2), p.174-178
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MutMap accelerates breeding of a salt-tolerant rice cultivar
Author / Creator:Takagi, Hiroki ; Tamiru, Muluneh ; Abe, Akira ; Yoshida, Kentaro ; Uemura, Aiko ; Yaegashi, Hiroki ; Obara, Tsutomu ; Oikawa, Kaori ; Utsushi, Hiroe ; Kanzaki, Eiko ; Mitsuoka, Chikako ; Natsume, Satoshi ; Kosugi, Shunichi ; Kanzaki, Hiroyuki ; Matsumura, Hideo ; Urasaki, Naoya ; Kamoun, Sophien ; Terauchi, Ryohei
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2015-05, Vol.33 (5), p.445-449
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MutMap-Gap: whole-genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii
Author / Creator:Takagi, Hiroki ; Uemura, Aiko ; Yaegashi, Hiroki ; Tamiru, Muluneh ; Abe, Akira ; Mitsuoka, Chikako ; Utsushi, Hiroe ; Natsume, Satoshi ; Kanzaki, Hiroyuki ; Matsumura, Hideo ; Saitoh, Hiromasa ; Yoshida, Kentaro ; Cano, Liliana M. ; Kamoun, Sophien ; Terauchi, Ryohei
Publisher:England: New Phytologist Trust
Journal title:The New phytologist, 2013-10, Vol.200 (1), p.276-283
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ArticlesPeer ReviewedFull Text
MutMap+: genetic mapping and mutant identification without crossing in rice
Author / Creator:Fekih, Rym ; Takagi, Hiroki ; Tamiru, Muluneh ; Abe, Akira ; Natsume, Satoshi ; Yaegashi, Hiroki ; Sharma, Shailendra ; Sharma, Shiveta ; Kanzaki, Hiroyuki ; Matsumura, Hideo ; Saitoh, Hiromasa ; Mitsuoka, Chikako ; Utsushi, Hiroe ; Uemura, Aiko ; Kanzaki, Eiko ; Kosugi, Shunichi ; Yoshida, Kentaro ; Cano, Liliana ; Kamoun, Sophien ; Terauchi, Ryohei
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-07, Vol.8 (7), p.e68529-e68529
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A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.)
Author / Creator:Tamiru, Muluneh ; Undan, Jerwin R. ; Takagi, Hiroki ; Abe, Akira ; Yoshida, Kakoto ; Undan, Jesusa Q. ; Natsume, Satoshi ; Uemura, Aiko ; Saitoh, Hiromasa ; Matsumura, Hideo ; Urasaki, Naoya ; Yokota, Takao ; Terauchi, Ryohei
Publisher:Dordrecht: Springer Netherlands
Journal title:Plant molecular biology, 2015-05, Vol.88 (1-2), p.85-99
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Coval: improving alignment quality and variant calling accuracy for next-generation sequencing data
Author / Creator:Kosugi, Shunichi ; Natsume, Satoshi ; Yoshida, Kentaro ; MacLean, Daniel ; Cano, Liliana ; Kamoun, Sophien ; Terauchi, Ryohei
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-10, Vol.8 (10), p.e75402-e75402
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ArticlesPeer ReviewedFull Text
High-performance pipeline for MutMap and QTL-seq
Author / Creator:Sugihara, Yu ; Young, Lester ; Yaegashi, Hiroki ; Natsume, Satoshi ; Shea, Daniel J ; Takagi, Hiroki ; Booker, Helen ; Innan, Hideki ; Terauchi, Ryohei ; Abe, Akira
Publisher:United States: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2022-03, Vol.10, p.e13170-e13170, Article e13170
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Identification of candidate flowering and sex genes in white Guinea yam (D. rotundata Poir.) by SuperSAGE transcriptome profiling
Author / Creator:Girma, Gezahegn ; Natsume, Satoshi ; Carluccio, Anna Vittoria ; Takagi, Hiroki ; Matsumura, Hideo ; Uemura, Aiko ; Muranaka, Satoru ; Takagi, Hiroko ; Stavolone, Livia ; Gedil, Melaku ; Spillane, Charles ; Terauchi, Ryohei ; Tamiru, Muluneh
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-09, Vol.14 (9), p.e0216912-e0216912
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ArticlesPeer ReviewedFull Text
Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination
Author / Creator:Tamiru, Muluneh ; Natsume, Satoshi ; Takagi, Hiroki ; White, Benjamen ; Yaegashi, Hiroki ; Shimizu, Motoki ; Yoshida, Kentaro ; Uemura, Aiko ; Oikawa, Kaori ; Abe, Akira ; Urasaki, Naoya ; Matsumura, Hideo ; Babil, Pachakkil ; Yamanaka, Shinsuke ; Matsumoto, Ryo ; Muranaka, Satoru ; Girma, Gezahegn ; Lopez-Montes, Antonio ; Gedil, Melaku ; Bhattacharjee, Ranjana ; Abberton, Michael ; Kumar, P Lava ; Rabbi, Ismail ; Tsujimura, Mai ; Terachi, Toru ; Haerty, Wilfried ; Corpas, Manuel ; Kamoun, Sophien ; Kahl, Günter ; Takagi, Hiroko ; Asiedu, Robert ; Terauchi, Ryohei
Publisher:England: BioMed Central Ltd
Journal title:BMC biology, 2017-09, Vol.15 (1), p.86-86, Article 86
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ArticlesPeer ReviewedFull Text
The rice (Oryza sativa L.) LESION MIMIC RESEMBLING, which encodes an AAA-type ATPase, is implicated in defense response
Author / Creator:Fekih, Rym ; Tamiru, Muluneh ; Kanzaki, Hiroyuki ; Abe, Akira ; Yoshida, Kentaro ; Kanzaki, Eiko ; Saitoh, Hiromasa ; Takagi, Hiroki ; Natsume, Satoshi ; Undan, Jerwin R. ; Undan, Jesusa ; Terauchi, Ryohei
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Molecular genetics and genomics : MGG, 2015-04, Vol.290 (2), p.611-622
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Genome analysis of the foxtail millet pathogen Sclerospora graminicola reveals the complex effector repertoire of graminicolous downy mildews
Author / Creator:Kobayashi, Michie ; Hiraka, Yukie ; Abe, Akira ; Yaegashi, Hiroki ; Natsume, Satoshi ; Kikuchi, Hideko ; Takagi, Hiroki ; Saitoh, Hiromasa ; Win, Joe ; Kamoun, Sophien ; Terauchi, Ryohei
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2017-11, Vol.18 (1), p.897-897, Article 897
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A chloroplast-localized protein LESION AND LAMINA BENDING affects defence and growth responses in rice
Author / Creator:Tamiru, Muluneh ; Takagi, Hiroki ; Abe, Akira ; Yokota, Takao ; Kanzaki, Hiroyuki ; Okamoto, Haruko ; Saitoh, Hiromasa ; Takahashi, Hideyuki ; Fujisaki, Koki ; Oikawa, Kaori ; Uemura, Aiko ; Natsume, Satoshi ; Jikumaru, Yusuke ; Matsuura, Hideyuki ; Umemura, Kenji ; Terry, Matthew J. ; Terauchi, Ryohei
Publisher:England: New Phytologist Trust
Journal title:The New phytologist, 2016-06, Vol.210 (4), p.1282-1297
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ArticlesPeer ReviewedFull Text
Genome sequence comparison reveals a candidate gene involved in male–hermaphrodite differentiation in papaya (Carica papaya) trees
Author / Creator:Ueno, Hiroki ; Urasaki, Naoya ; Natsume, Satoshi ; Yoshida, Kentaro ; Tarora, Kazuhiko ; Shudo, Ayano ; Terauchi, Ryohei ; Matsumura, Hideo
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Molecular genetics and genomics : MGG, 2015-04, Vol.290 (2), p.661-670
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ArticlesPeer ReviewedFull Text
Correction: Coval: Improving Alignment Quality and Variant Calling Accuracy for Next-Generation Sequencing Data
Author / Creator:Kosugi, Shunichi ; Natsume, Satoshi ; Yoshida, Kentaro ; MacLean, Daniel ; Cano, Liliana ; Kamoun, Sophien ; Terauchi, Ryohei
Publisher:San Francisco: Public Library of Science
Journal title:PloS one, 2014-01, Vol.9 (1)
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QTL map meets population genomics: an application to rice
Author / Creator:Fawcett, Jeffrey A ; Kado, Tomoyuki ; Sasaki, Eriko ; Takuno, Shohei ; Yoshida, Kentaro ; Sugino, Ryuichi P ; Kosugi, Shunichi ; Natsume, Satoshi ; Mitsuoka, Chikako ; Uemura, Aiko ; Takagi, Hiroki ; Abe, Akira ; Ishii, Takashige ; Terauchi, Ryohei ; Innan, Hideki
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-12, Vol.8 (12), p.e83720-e83720
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ArticlesPeer ReviewedFull Text
Grouping of multicopper oxidases in Lentinula edodes by sequence similarities and expression patterns
Author / Creator:Sakamoto, Yuichi ; Nakade, Keiko ; Yoshida, Kentaro ; Natsume, Satoshi ; Miyazaki, Kazuhiro ; Sato, Shiho ; van Peer, Arend F. ; Konno, Naotake
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:AMB Express, 2015-09, Vol.5 (1), p.63-63, Article 63
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Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements
Author / Creator:Yoshida, Kentaro ; Saunders, Diane G O ; Mitsuoka, Chikako ; Natsume, Satoshi ; Kosugi, Shunichi ; Saitoh, Hiromasa ; Inoue, Yoshihiro ; Chuma, Izumi ; Tosa, Yukio ; Cano, Liliana M ; Kamoun, Sophien ; Terauchi, Ryohei
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2016-05, Vol.17 (1), p.370-370, Article 370
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ArticlesPeer ReviewedFull Text
Genome analyses reveal the hybrid origin of the staple crop white Guinea yam (Dioscorea rotundata)
Author / Creator:Sugihara, Yu ; Darkwa, Kwabena ; Yaegashi, Hiroki ; Natsume, Satoshi ; Shimizu, Motoki ; Abe, Akira ; Hirabuchi, Akiko ; Ito, Kazue ; Oikawa, Kaori ; Tamiru-Oli, Muluneh ; Ohta, Atsushi ; Matsumoto, Ryo ; Agre, Paterne ; De Koeyer, David ; Pachakkil, Babil ; Yamanaka, Shinsuke ; Muranaka, Satoru ; Takagi, Hiroko ; White, Ben ; Asiedu, Robert ; Innan, Hideki ; Asfaw, Asrat ; Adebola, Patrick ; Terauchi, Ryohei
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2020-12, Vol.117 (50), p.31987-31992
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ArticlesPeer ReviewedFull Text
Identification of candidate flowering and sex genes in white Guinea yam
Author / Creator:Girma, Gezahegn ; Natsume, Satoshi ; Carluccio, Anna Vittoria ; Takagi, Hiroki ; Matsumura, Hideo ; Uemura, Aiko ; Muranaka, Satoru ; Takagi, Hiroko ; Stavolone, Livia ; Gedil, Melaku ; Spillane, Charles ; Terauchi, Ryohei ; Tamiru, Muluneh
Publisher:Public Library of Science
Journal title:PloS one, 2019-09, Vol.14 (9), p.e0216912
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Screening of rice mutants with improved saccharification efficiency results in the identification of CONSTITUTIVE PHOTOMORPHOGENIC 1 and GOLD HULL AND INTERNODE 1
Author / Creator:Hirano, Ko ; Masuda, Reiko ; Takase, Wakana ; Morinaka, Yoichi ; Kawamura, Mayuko ; Takeuchi, Yoshinobu ; Takagi, Hiroki ; Yaegashi, Hiroki ; Natsume, Satoshi ; Terauchi, Ryohei ; Kotake, Toshihisa ; Matsushita, Yasuyuki ; Sazuka, Takashi
Publisher:Berlin/Heidelberg: Springer Science + Business Media
Journal title:Planta, 2017-07, Vol.246 (1), p.61-74
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Genome sequencing reveals agronomically important loci in rice using MutMap

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MutMap accelerates breeding of a salt-tolerant rice cultivar

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MutMap-Gap: whole-genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii

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MutMap+: genetic mapping and mutant identification without crossing in rice

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A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.)

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Coval: improving alignment quality and variant calling accuracy for next-generation sequencing data

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High-performance pipeline for MutMap and QTL-seq

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Identification of candidate flowering and sex genes in white Guinea yam (D. rotundata Poir.) by SuperSAGE transcriptome profiling

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Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

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The rice (Oryza sativa L.) LESION MIMIC RESEMBLING, which encodes an AAA-type ATPase, is implicated in defense response

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Genome analysis of the foxtail millet pathogen Sclerospora graminicola reveals the complex effector repertoire of graminicolous downy mildews

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A chloroplast-localized protein LESION AND LAMINA BENDING affects defence and growth responses in rice

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Genome sequence comparison reveals a candidate gene involved in male–hermaphrodite differentiation in papaya (Carica papaya) trees

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Correction: Coval: Improving Alignment Quality and Variant Calling Accuracy for Next-Generation Sequencing Data

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QTL map meets population genomics: an application to rice

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Grouping of multicopper oxidases in Lentinula edodes by sequence similarities and expression patterns

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Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements

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Genome analyses reveal the hybrid origin of the staple crop white Guinea yam (Dioscorea rotundata)

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Identification of candidate flowering and sex genes in white Guinea yam

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Screening of rice mutants with improved saccharification efficiency results in the identification of CONSTITUTIVE PHOTOMORPHOGENIC 1 and GOLD HULL AND INTERNODE 1

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