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Newsletter articlesFull Text
INTERNATIONAL PATENT: THE JACKSON LABORATORIES, WEI, CHIA-LIN, NGAN, CHEW, YEE FILES APPLICATION FOR "ORI-C MEDIATED EXTRACHROMOSOMAL DNA AMPLICATION AND SEQUENCING FOR DIAGNOSING, SCREENING AND TREAT...
Publisher:Washington, D.C: HT Digital Streams Limited
Journal title:US Fed News Service, Including US State News, 2023
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ArticlesPeer ReviewedFull Text
Cancer cells survive with survivin
Author / Creator:Yamamoto, Hirofumi ; Ngan, Chew Yee ; Monden, Morito
Publisher:Melbourne, Australia: Blackwell Publishing Asia
Journal title:Cancer science, 2008-09, Vol.99 (9), p.1709-1714
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ArticlesPeer ReviewedFull Text
CTCF-mediated functional chromatin interactome in pluripotent cells
Author / Creator:Handoko, Lusy ; Xu, Han ; Li, Guoliang ; Ngan, Chew Yee ; Chew, Elaine ; Schnapp, Marie ; Lee, Charlie Wah Heng ; Ye, Chaopeng ; Ping, Joanne Lim Hui ; Mulawadi, Fabianus ; Wong, Eleanor ; Sheng, Jianpeng ; Zhang, Yubo ; Poh, Thompson ; Chan, Chee Seng ; Kunarso, Galih ; Shahab, Atif ; Bourque, Guillaume ; Cacheux-Rataboul, Valere ; Sung, Wing-Kin ; Ruan, Yijun ; Wei, Chia-Lin
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2011-07, Vol.43 (7), p.630-638
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ArticlesPeer ReviewedFull Text
DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor
Author / Creator:Turco, Gina M. ; Kajala, Kaisa ; Kunde‐Ramamoorthy, Govindarajan ; Ngan, Chew‐Yee ; Olson, Andrew ; Deshphande, Shweta ; Tolkunov, Denis ; Waring, Barbara ; Stelpflug, Scott ; Klein, Patricia ; Schmutz, Jeremy ; Kaeppler, Shawn ; Ware, Doreen ; Wei, Chia‐Lin ; Etchells, J. Peter ; Brady, Siobhan M.
Publisher:England: New Phytologist Trust
Journal title:The New phytologist, 2017-05, Vol.214 (3), p.1213-1229
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ArticlesPeer ReviewedFull Text
Oxaliplatin induces mitotic catastrophe and apoptosis in esophageal cancer cells
Author / Creator:Ngan, Chew Yee ; Yamamoto, Hirofumi ; Takagi, Akimitsu ; Fujie, Yujiro ; Takemasa, Ichiro ; Ikeda, Masataka ; Takahashi‐Yanaga, Fumi ; Sasaguri, Toshiyuki ; Sekimoto, Mitsugu ; Matsuura, Nariaki ; Monden, Morito
Publisher:Melbourne, Australia: Blackwell Publishing Asia
Journal title:Cancer science, 2008-01, Vol.99 (1), p.129-139
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ArticlesPeer ReviewedFull Text
Chromatin connectivity maps reveal dynamic promoter–enhancer long-range associations
Author / Creator:Zhang, Yubo ; Wong, Chee-Hong ; Birnbaum, Ramon Y. ; Li, Guoliang ; Favaro, Rebecca ; Ngan, Chew Yee ; Lim, Joanne ; Tai, Eunice ; Poh, Huay Mei ; Wong, Eleanor ; Mulawadi, Fabianus Hendriyan ; Sung, Wing-Kin ; Nicolis, Silvia ; Ahituv, Nadav ; Ruan, Yijun ; Wei, Chia-Lin
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2013-12, Vol.504 (7479), p.306-310
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ArticlesPeer ReviewedFull Text
Picky comprehensively detects high-resolution structural variants in nanopore long reads
Author / Creator:Gong, Liang ; Wong, Chee-Hong ; Cheng, Wei-Chung ; Tjong, Harianto ; Menghi, Francesca ; Ngan, Chew Yee ; Liu, Edison T. ; Wei, Chia-Lin
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2018-06, Vol.15 (6), p.455-460
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ChIATAC is an efficient strategy for multi-omics mapping of 3D epigenomes from low-cell inputs
Author / Creator:Chai, Haoxi ; Tjong, Harianto ; Li, Peng ; Liao, Wei ; Wang, Ping ; Wong, Chee Hong ; Ngan, Chew Yee ; Leonard, Warren J. ; Wei, Chia-Lin ; Ruan, Yijun
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-01, Vol.14 (1), p.213-17, Article 213
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ArticlesPeer ReviewedFull Text
Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea
Author / Creator:Muraguchi, Hajime ; Umezawa, Kiwamu ; Niikura, Mai ; Yoshida, Makoto ; Kozaki, Toshinori ; Ishii, Kazuo ; Sakai, Kiyota ; Shimizu, Motoyuki ; Nakahori, Kiyoshi ; Sakamoto, Yuichi ; Choi, Cindy ; Ngan, Chew Yee ; Lindquist, Eika ; Lipzen, Anna ; Tritt, Andrew ; Haridas, Sajeet ; Barry, Kerrie ; Grigoriev, Igor V. ; Pukkila, Patricia J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-10, Vol.10 (10), p.e0141586-e0141586
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ArticlesPeer ReviewedFull Text
Marine algae and land plants share conserved phytochrome signaling systems
Author / Creator:Duanmu, Deqiang ; Bachy, Charles ; Sudek, Sebastian ; Wong, Chee-Hong ; Jiménez, Valeria ; Rockwell, Nathan C. ; Martin, Shelley S. ; Ngan, Chew Yee ; Reistetter, Emily N. ; van Baren, Marijke J. ; Price, Dana C. ; Wei, Chia-Lin ; Reyes-Prieto, Adrian ; Lagarias, J. Clark ; Worden, Alexandra Z.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2014-11, Vol.111 (44), p.15827-15832
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ArticlesPeer ReviewedFull Text
Lineage-specific chromatin signatures reveal a regulator of lipid metabolism in microalgae
Author / Creator:Ngan, Chew Yee ; Wong, Chee-Hong ; Choi, Cindy ; Yoshinaga, Yuko ; Louie, Katherine ; Jia, Jing ; Chen, Cindy ; Bowen, Benjamin ; Cheng, Haoyu ; Leonelli, Lauriebeth ; Kuo, Rita ; Baran, Richard ; García-Cerdán, José G. ; Pratap, Abhishek ; Wang, Mei ; Lim, Joanne ; Tice, Hope ; Daum, Chris ; Xu, Jian ; Northen, Trent ; Visel, Axel ; Bristow, James ; Niyogi, Krishna K. ; Wei, Chia-Lin
Publisher:London: Nature Publishing Group UK
Journal title:Nature plants, 2015-07, Vol.1 (8), p.15107-15107, Article 15107
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ArticlesPeer ReviewedFull Text
FOS Rescues Neuronal Differentiation of Sox2-Deleted Neural Stem Cells by Genome-Wide Regulation of Common SOX2 and AP1(FOS-JUN) Target Genes
Author / Creator:Pagin, Miriam ; Pernebrink, Mattias ; Pitasi, Mattia ; Malighetti, Federica ; Ngan, Chew-Yee ; Ottolenghi, Sergio ; Pavesi, Giulio ; Cantù, Claudio ; Nicolis, Silvia K.
Publisher:Basel: MDPI AG
Journal title:Cells (Basel, Switzerland), 2021-07, Vol.10 (7), p.1757
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ArticlesPeer ReviewedFull Text
Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil
Author / Creator:Rice, Marlen C. ; Norton, Jeanette M. ; Valois, Frederica ; Bollmann, Annette ; Bottomley, Peter J. ; Klotz, Martin G. ; Laanbroek, Hendrikus J. ; Suwa, Yuichi ; Stein, Lisa Y. ; Sayavedra-Soto, Luis ; Woyke, Tanja ; Shapiro, Nicole ; Goodwin, Lynne A. ; Huntemann, Marcel ; Clum, Alicia ; Pillay, Manoj ; Kyrpides, Nikos ; Varghese, Neha ; Mikhailova, Natalia ; Markowitz, Victor ; Palaniappan, Krishna ; Ivanova, Natalia ; Stamatis, Dimitrios ; Reddy, T. B. K. ; Ngan, Chew Yee ; Daum, Chris
Publisher:England: BioMed Central Ltd
Journal title:Environmental microbiome, 2016-07, Vol.11 (1), p.46, Article 46
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ArticlesPeer ReviewedFull Text
Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample
Author / Creator:Gutierrez, Tony ; Whitman, William B ; Huntemann Marcel ; Copeland, Alex ; Chen, Amy ; Vargese Neha ; Kyrpides, Nikos C ; Pillay Manoj ; Ivanova, Natalia ; Mikhailova, Natalia ; Mukherjee Supratim ; Stamatis Dimitrios ; Reddy T. B. K. ; Ngan Chew Yee ; Mansi, Chovatia ; Daum, Chris ; Shapiro, Nicole ; Woyke Tanja
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2017-08, Vol.5 (32)
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ArticlesPeer ReviewedFull Text
Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
Author / Creator:Gutierrez, Tony ; Whitman, William B ; Huntemann Marcel ; Copeland, Alex ; Chen, Amy ; Kyrpides Nikos ; Markowitz, Victor ; Pillay Manoj ; Ivanova, Natalia ; Mikhailova, Natalia ; Ovchinnikova Galina ; Andersen, Evan ; Pati Amrita ; Stamatis Dimitrios ; Reddy T. B. K. ; Ngan Chew Yee ; Mansi, Chovatia ; Daum, Chris ; Shapiro, Nicole ; Cantor, Michael N ; Woyke Tanja
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-08, Vol.4 (4)
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ArticlesPeer ReviewedFull Text
Overexpression of Tyrosine Kinase B Protein as a Predictor for Distant Metastases and Prognosis in Gastric Carcinoma
Author / Creator:Zhang, Yong ; Fujiwara, Yoshiyuki ; Doki, Yuichiro ; Takiguchi, Shuji ; Yasuda, Takushi ; Miyata, Hiroshi ; Yamazaki, Makoto ; Ngan, Chew Yee ; Yamamoto, Hirofumi ; Ma, Qingyong ; Monden, Morito
Publisher:Basel, Switzerland: Karger
Journal title:Oncology, 2008-01, Vol.75 (1-2), p.17-26
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ArticlesPeer ReviewedFull Text
Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm
Author / Creator:Woo, Hannah L ; O’Dell Kaela B. ; Sagar, Utturkar ; McBride, Kathryn R ; Huntemann Marcel ; Clum Alicia ; Pillay Manoj ; Palaniappan Krishnaveni ; Varghese Neha ; Mikhailova, Natalia ; Stamatis Dimitrios ; Reddy T. B. K. ; Ngan Chew Yee ; Daum, Chris ; Shapiro, Nicole ; Markowitz, Victor ; Ivanova, Natalia ; Kyrpides Nikos ; Woyke Tanja ; Brown, Steven D ; Hazen, Terry C
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-11, Vol.4 (6)
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ArticlesPeer ReviewedFull Text
Genome Sequence of Marinobacter sp. Strain MCTG268 Isolated from the Cosmopolitan Marine Diatom Skeletonema costatum
Author / Creator:Gutierrez, Tony ; Whitman, William B ; Huntemann Marcel ; Copeland, Alex ; Chen, Amy ; Kyrpides Nikos ; Markowitz, Victor ; Pillay Manoj ; Ivanova, Natalia ; Mikhailova, Natalia ; Ovchinnikova Galina ; Andersen, Evan ; Pati Amrita ; Stamatis Dimitrios ; Reddy T. B. K. ; Ngan Chew Yee ; Mansi, Chovatia ; Daum, Chris ; Shapiro, Nicole ; Cantor, Michael N ; Woyke Tanja
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-09, Vol.4 (5)
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ArticlesPeer ReviewedFull Text
Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7
Author / Creator:Utturkar, Sagar M ; Bayer, Edward A ; Borovok Ilya ; Lamed Raphael ; Hurt, Richard A ; Land, Miriam L ; Klingeman, Dawn M ; Elias, Dwayne ; Zhou, Jizhong ; Huntemann Marcel ; Clum Alicia ; Pillay Manoj ; Palaniappan Krishnaveni ; Varghese Neha ; Mikhailova, Natalia ; Stamatis Dimitrios ; Reddy T. B. K. ; Ngan Chew Yee ; Daum, Chris ; Shapiro, Nicole ; Markowitz, Victor ; Ivanova, Natalia ; Kyrpides Nikos ; Woyke Tanja ; Brown, Steven D
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-09, Vol.4 (5)
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ArticlesPeer ReviewedFull Text
High-Quality Draft Genomes from Thermus caliditerrae YIM 77777 and T. tengchongensis YIM 77401, Isolates from Tengchong, China
Author / Creator:Mefferd Chrisabelle C. ; En-Min, Zhou ; Tian-Tian, Yu ; Hong, Ming ; Murugapiran, Senthil K ; Huntemann Marcel ; Clum Alicia ; Pillay Manoj ; Palaniappan Krishnaveni ; Varghese Neha ; Mikhailova, Natalia ; Stamatis Dimitrios ; Reddy T. B. K. ; Ngan Chew Yee ; Daum, Chris ; Duffy Kecia ; Shapiro, Nicole ; Markowitz, Victor ; Ivanova, Natalia ; Kyrpides Nikos ; Williams, Amanda J ; Woyke Tanja ; Wen-Jun, Li ; Hedlund, Brian P
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-04, Vol.4 (2)
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INTERNATIONAL PATENT: THE JACKSON LABORATORIES, WEI, CHIA-LIN, NGAN, CHEW, YEE FILES APPLICATION FOR "ORI-C MEDIATED EXTRACHROMOSOMAL DNA AMPLICATION AND SEQUENCING FOR DIAGNOSING, SCREENING AND TREAT...

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Cancer cells survive with survivin

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CTCF-mediated functional chromatin interactome in pluripotent cells

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DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor

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Oxaliplatin induces mitotic catastrophe and apoptosis in esophageal cancer cells

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Chromatin connectivity maps reveal dynamic promoter–enhancer long-range associations

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Picky comprehensively detects high-resolution structural variants in nanopore long reads

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ChIATAC is an efficient strategy for multi-omics mapping of 3D epigenomes from low-cell inputs

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Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea

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Marine algae and land plants share conserved phytochrome signaling systems

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Lineage-specific chromatin signatures reveal a regulator of lipid metabolism in microalgae

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FOS Rescues Neuronal Differentiation of Sox2-Deleted Neural Stem Cells by Genome-Wide Regulation of Common SOX2 and AP1(FOS-JUN) Target Genes

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Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil

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Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample

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Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton

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Overexpression of Tyrosine Kinase B Protein as a Predictor for Distant Metastases and Prognosis in Gastric Carcinoma

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Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm

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Genome Sequence of Marinobacter sp. Strain MCTG268 Isolated from the Cosmopolitan Marine Diatom Skeletonema costatum

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Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7

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High-Quality Draft Genomes from Thermus caliditerrae YIM 77777 and T. tengchongensis YIM 77401, Isolates from Tengchong, China

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