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ArticlesPeer ReviewedFull Text
Liquid chromatography-tandem mass spectrometry-based fragmentation analysis of glycopeptides
Author / Creator:Nilsson, Jonas
Publisher:New York: Springer US
Journal title:Glycoconjugate journal, 2016-06, Vol.33 (3), p.261-272
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Assessment of image quality in abdominal CT: potential dose reduction with model-based iterative reconstruction
Author / Creator:Kataria, Bharti ; Jonas Nilsson Althén ; Smedby, Örjan ; Persson, Anders ; Hannibal Sökjer ; Sandborg, Michael
Publisher:Heidelberg: Springer Nature B.V
Journal title:European radiology, 2018-06, Vol.28 (6), p.2464-2473
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ArticlesPeer ReviewedFull Text
Systematic analysis of noncoding somatic mutations and gene expression alterations across 14 tumor types
Author / Creator:Fredriksson, Nils J ; Ny, Lars ; Nilsson, Jonas A ; Larsson, Erik
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2014-12, Vol.46 (12), p.1258-1263
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The PEMDAC phase 2 study of pembrolizumab and entinostat in patients with metastatic uveal melanoma
Author / Creator:Ny, Lars ; Jespersen, Henrik ; Karlsson, Joakim ; Alsén, Samuel ; Filges, Stefan ; All-Eriksson, Charlotta ; Andersson, Bengt ; Carneiro, Ana ; Helgadottir, Hildur ; Levin, Max ; Ljuslinder, Ingrid ; Olofsson Bagge, Roger ; Sah, Vasu R. ; Stierner, Ulrika ; Ståhlberg, Anders ; Ullenhag, Gustav ; Nilsson, Lisa M. ; Nilsson, Jonas A.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-08, Vol.12 (1), p.5155-10, Article 5155
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ArticlesPeer ReviewedFull Text
Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancers
Author / Creator:Alaei-Mahabadi, Babak ; Bhadury, Joydeep ; Karlsson, Joakim W. ; Nilsson, Jonas A. ; Larsson, Erik
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2016-11, Vol.113 (48), p.13768-13773
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Clinical responses to adoptive T-cell transfer can be modeled in an autologous immune-humanized mouse model
Author / Creator:Jespersen, Henrik ; Lindberg, Mattias F. ; Donia, Marco ; Söderberg, Elin M. V. ; Andersen, Rikke ; Keller, Ulrich ; Ny, Lars ; Svane, Inge Marie ; Nilsson, Lisa M. ; Nilsson, Jonas A.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2017-09, Vol.8 (1), p.707-10, Article 707
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SARS-CoV-2 replicates and displays oncolytic properties in clear cell and papillary renal cell carcinoma
Author / Creator:Choong, Oi Kuan ; Jakobsson, Rasmus ; Bergdahl, Anna Grenabo ; Brunet, Sofia ; Kärmander, Ambjörn ; Waldenström, Jesper ; Arvidsson, Yvonne ; Altiparmak, Gülay ; Nilsson, Jonas A ; Karlsson, Joakim ; Nyström, Kristina ; Johansson, Martin E
Publisher:United States: Public Library of Science
Journal title:PloS one, 2023-01, Vol.18 (1), p.e0279578-e0279578
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ArticlesPeer ReviewedFull Text
Molecular profiling of driver events in metastatic uveal melanoma
Author / Creator:Karlsson, Joakim ; Nilsson, Lisa M. ; Mitra, Suman ; Alsén, Samuel ; Shelke, Ganesh Vilas ; Sah, Vasu R. ; Forsberg, Elin M. V. ; Stierner, Ulrika ; All-Eriksson, Charlotta ; Einarsdottir, Berglind ; Jespersen, Henrik ; Ny, Lars ; Lindnér, Per ; Larsson, Erik ; Olofsson Bagge, Roger ; Nilsson, Jonas A.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-04, Vol.11 (1), p.1894-1894, Article 1894
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ArticlesPeer ReviewedFull Text
BET and HDAC inhibitors induce similar genes and biological effects and synergize to kill in Myc-induced murine lymphoma
Author / Creator:Bhadury, Joydeep ; Nilsson, Lisa M ; Muralidharan, Somsundar Veppil ; Green, Lydia C ; Li, Zhoulei ; Gesner, Emily M ; Hansen, Henrik C ; Keller, Ulrich B ; McLure, Kevin G ; Nilsson, Jonas A
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2014-07, Vol.111 (26), p.E2721-E2730
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ArticlesPeer ReviewedFull Text
BRAFV600 inhibition alters the microRNA cargo in the vesicular secretome of malignant melanoma cells
Author / Creator:Lunavat, Taral R. ; Cheng, Lesley ; Einarsdottir, Berglind O. ; Bagge, Roger Olofsson ; Muralidharan, Somsundar Veppil ; Sharples, Robyn A. ; Lässer, Cecilia ; Gho, Yong Song ; Hill, Andrew F. ; Nilsson, Jonas A. ; Lötvall, Jan
Publisher:National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2017-07, Vol.114 (29), p.E5930-E5939
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ArticlesPeer ReviewedFull Text
A systematic literature review of time to return to work and narcotic use after lumbar spinal fusion using minimal invasive and open surgery techniques
Author / Creator:Wang, Xuan ; Borgman, Benny ; Vertuani, Simona ; Nilsson, Jonas
Publisher:England: BioMed Central Ltd
Journal title:BMC health services research, 2017-06, Vol.17 (1), p.446-446, Article 446
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ArticlesPeer ReviewedFull Text
Glycosaminoglycan Domain Mapping of Cellular Chondroitin/Dermatan Sulfates
Author / Creator:Persson, Andrea ; Vorontsov, Egor ; Larson, Göran ; Nilsson, Jonas
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-02, Vol.10 (1), p.3506-3506, Article 3506
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ArticlesPeer ReviewedFull Text
H-STS, L-STS and KRJ-I are not authentic GEPNET cell lines
Author / Creator:Hofving, Tobias ; Karlsson, Joakim ; Nilsson, Ola ; Nilsson, Jonas A.
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2019-10, Vol.51 (10), p.1426-1427
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Key drivers of visual acuity gains in neovascular age-related macular degeneration in real life: findings from the AURA study
Author / Creator:Holz, Frank G ; Tadayoni, Ramin ; Beatty, Stephen ; Berger, Alan ; Cereda, Matteo Giuseppe ; Hykin, Philip ; Staurenghi, Giovanni ; Wittrup-Jensen, Kim ; Altemark, Andreas ; Nilsson, Jonas ; Kim, Kun ; Sivaprasad, Sobha
Publisher:England: BMJ Publishing Group LTD
Journal title:British journal of ophthalmology, 2016-12, Vol.100 (12), p.1623-1628
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ArticlesPeer ReviewedFull Text
Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis
Author / Creator:Kawahara, Rebeca ; Chernykh, Anastasia ; Alagesan, Kathirvel ; Bern, Marshall ; Cao, Weiqian ; Chalkley, Robert J. ; Cheng, Kai ; Choo, Matthew S. ; Edwards, Nathan ; Goldman, Radoslav ; Hoffmann, Marcus ; Hu, Yingwei ; Huang, Yifan ; Kim, Jin Young ; Kletter, Doron ; Liquet, Benoit ; Liu, Mingqi ; Mechref, Yehia ; Meng, Bo ; Neelamegham, Sriram ; Nguyen-Khuong, Terry ; Nilsson, Jonas ; Pap, Adam ; Park, Gun Wook ; Parker, Benjamin L. ; Pegg, Cassandra L. ; Penninger, Josef M. ; Phung, Toan K. ; Pioch, Markus ; Rapp, Erdmann ; Sakalli, Enes ; Sanda, Miloslav ; Schulz, Benjamin L. ; Scott, Nichollas E. ; Sofronov, Georgy ; Stadlmann, Johannes ; Vakhrushev, Sergey Y. ; Woo, Christina M. ; Wu, Hung-Yi ; Yang, Pengyuan ; Ying, Wantao ; Zhang, Hui ; Zhang, Yong ; Zhao, Jingfu ; Zaia, Joseph ; Haslam, Stuart M. ; Palmisano, Giuseppe ; Yoo, Jong Shin ; Larson, Göran ; Khoo, Kai-Hooi ; Medzihradszky, Katalin F. ; Kolarich, Daniel ; Packer, Nicolle H. ; Thaysen-Andersen, Morten
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2021-11, Vol.18 (11), p.1304-1316
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ArticlesPeer ReviewedFull Text
Enrichment of glycopeptides for glycan structure and attachment site identification
Author / Creator:Nilsson, Jonas ; Rüetschi, Ulla ; Halim, Adnan ; Hesse, Camilla ; Carlsohn, Elisabet ; Brinkmalm, Gunnar ; Larson, Göran
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2009-11, Vol.6 (11), p.809-811
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An approach to suppress the evolution of resistance in BRAF(V600E)-mutant cancer
Author / Creator:Xue, Y. H. ; Martelotto, L. ; Baslan, T. ; Vides, A. ; Solomon, M. ; Mai, T. T. ; Chaudhary, N. ; Riely, G. J. ; Li, B. T. ; Scott, K. ; Cechhi, F. ; Stierner, Ulrika ; Chadalavada, K. ; de Stanchina, E. ; Schwartz, S. ; Hembrough, T. ; Nanjangud, G. ; Nilsson, Jonas A ; Lowe, S. W. ; Reis, J. ; Rosen, N. ; Lito, P.
Journal title:Nature medicine, 2017-08, Vol.23 (8)
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ArticlesPeer ReviewedFull Text
Delayed vascular complication after collagenase injection for Dupuytren disease
Author / Creator:Nordenskjöld, Jesper ; Nilsson, Jonas ; Kalaf, Roua ; Atroshi, Isam
Publisher:London: BioMed Central Ltd
Journal title:BMC musculoskeletal disorders, 2023-10, Vol.24 (1), p.1-837, Article 837
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A pilocytic astrocytoma with novel ATG16L1::NTRK2 fusion responsive to larotrectinib: a case report with genomic and functional analysis
Author / Creator:Deland, Lily ; Keane, Simon ; Olsson Bontell, Thomas ; Sjöberg Bexelius, Tomas ; Gudinaviciene, Inga ; De La Cuesta, Esther ; De Luca, Francesca ; Nilsson, Jonas A ; Carén, Helena ; Mörse, Helena ; Abel, Frida
Publisher:England: Oxford University Press
Journal title:The oncologist (Dayton, Ohio), 2025-03, Vol.30 (3)
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Down-regulation of miR-101 in endothelial cells promotes blood vessel formation through reduced repression of EZH2
Author / Creator:Smits, Michiel ; Mir, Shahryar E ; Nilsson, R Jonas A ; van der Stoop, Petra M ; Niers, Johanna M ; Marquez, Victor E ; Cloos, Jacqueline ; Breakefield, Xandra O ; Krichevsky, Anna M ; Noske, David P ; Tannous, Bakhos A ; Würdinger, Thomas
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-01, Vol.6 (1), p.e16282-e16282
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Liquid chromatography-tandem mass spectrometry-based fragmentation analysis of glycopeptides

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Assessment of image quality in abdominal CT: potential dose reduction with model-based iterative reconstruction

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Systematic analysis of noncoding somatic mutations and gene expression alterations across 14 tumor types

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The PEMDAC phase 2 study of pembrolizumab and entinostat in patients with metastatic uveal melanoma

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Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancers

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Clinical responses to adoptive T-cell transfer can be modeled in an autologous immune-humanized mouse model

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SARS-CoV-2 replicates and displays oncolytic properties in clear cell and papillary renal cell carcinoma

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Molecular profiling of driver events in metastatic uveal melanoma

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BET and HDAC inhibitors induce similar genes and biological effects and synergize to kill in Myc-induced murine lymphoma

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BRAFV600 inhibition alters the microRNA cargo in the vesicular secretome of malignant melanoma cells

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A systematic literature review of time to return to work and narcotic use after lumbar spinal fusion using minimal invasive and open surgery techniques

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Glycosaminoglycan Domain Mapping of Cellular Chondroitin/Dermatan Sulfates

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H-STS, L-STS and KRJ-I are not authentic GEPNET cell lines

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Key drivers of visual acuity gains in neovascular age-related macular degeneration in real life: findings from the AURA study

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Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis

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Enrichment of glycopeptides for glycan structure and attachment site identification

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An approach to suppress the evolution of resistance in BRAF(V600E)-mutant cancer

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Delayed vascular complication after collagenase injection for Dupuytren disease

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A pilocytic astrocytoma with novel ATG16L1::NTRK2 fusion responsive to larotrectinib: a case report with genomic and functional analysis

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Down-regulation of miR-101 in endothelial cells promotes blood vessel formation through reduced repression of EZH2

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