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ArticlesPeer ReviewedFull Text
orsum: a Python package for filtering and comparing enrichment analyses using a simple principle
Author / Creator:Ozisik, Ozan ; Térézol, Morgane ; Baudot, Anaïs
Publisher:London: BioMed Central
Journal title:BMC bioinformatics, 2022-07, Vol.23 (1), p.1-293, Article 293
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System-level analysis of genes mutated in muscular dystrophies reveals a functional pattern associated with muscle weakness distribution
Author / Creator:Ozisik, Ozan ; Gorokhova, Svetlana ; Cerino, Mathieu ; Bartoli, Marc ; Baudot, Anaïs
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2024-05, Vol.14 (1), p.11225-11225, Article 11225
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ArticlesPeer ReviewedFull Text
Multi-omics analysis in inclusion body myositis identifies mir-16 responsible for HLA overexpression
Author / Creator:Wijnbergen, Daphne ; Johari, Mridul ; Ozisik, Ozan ; ‘t Hoen, Peter A.C. ; Ehrhart, Friederike ; Baudot, Anaïs ; Evelo, Chris T. ; Udd, Bjarne ; Roos, Marco ; Mina, Eleni
Publisher:England: BioMed Central Ltd
Journal title:Orphanet journal of rare diseases, 2025-01, Vol.20 (1), p.27-10, Article 27
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ArticlesPeer ReviewedFull Text
A collaborative network analysis for the interpretation of transcriptomics data in Huntington’s disease
Author / Creator:Ozisik, Ozan ; Kara, Nazli Sila ; Abbassi-Daloii, Tooba ; Térézol, Morgane ; Kuijper, Elsa C. ; Queralt-Rosinach, Núria ; Jacobsen, Annika ; Sezerman, Osman Ugur ; Roos, Marco ; Evelo, Chris T. ; Baudot, Anaïs ; Ehrhart, Friederike ; Mina, Eleni
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2025-01, Vol.15 (1), p.1412-12, Article 1412
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ArticlesPeer ReviewedFull Text
Magnetic Resonance Imaging Findings of Suprapatellar Fat Pad Impingement Syndrome: A Retrospective Study
Author / Creator:BALKANLI, Bahadır ; ARSLAN, Aydan ; ÖZIŞIK, Ozan ; ÖZDEMİR, Hacı Mustafa ; BARUTÇU, Özlem
Publisher:Istanbul: Galenos Publishing House
Journal title:Bezmialem science, 2024-01, Vol.12 (1), p.33-37
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ArticlesPeer ReviewedFull Text
Integrative analysis of multi-omics data reveals importance of collagen and the PI3K AKT signalling pathway in CAKUT
Author / Creator:Bayjanov, Jumamurat R. ; Doornbos, Cenna ; Ozisik, Ozan ; Shin, Woosub ; Queralt-Rosinach, Núria ; Wijnbergen, Daphne ; Saulnier-Blache, Jean-Sébastien ; Schanstra, Joost P. ; Buffin-Meyer, Bénédicte ; Klein, Julie ; Fernández, José M. ; Kaliyaperumal, Rajaram ; Baudot, Anaïs ; ’t Hoen, Peter A. C. ; Ehrhart, Friederike
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2024-09, Vol.14 (1), p.20731-12, Article 20731
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ArticlesPeer ReviewedFull Text
Overlap of vitamin A and vitamin D target genes with CAKUT-related processes [version 2; peer review: 2 approved, 2 approved with reservations]
Author / Creator:Ozisik, Ozan ; Ehrhart, Friederike ; Evelo, Chris T ; Mantovani, Alberto ; Baudot, Anaı̈s
Publisher:England: Faculty of 1000 Ltd
Journal title:F1000 research, 2021, Vol.10, p.395-395
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ArticlesPeer ReviewedFull Text
Progesterone at high doses reduces the growth of U87 and A172 glioblastoma cells: Proteomic changes regarding metabolism and immunity
Author / Creator:Altinoz, Meric A. ; Ucal, Yasemin ; Yilmaz, Muazzez C. ; Kiris, İrem ; Ozisik, Ozan ; Sezerman, Ugur ; Ozpinar, Aysel ; Elmaci, İlhan
Publisher:United States: John Wiley & Sons, Inc
Journal title:Cancer medicine (Malden, MA), 2020-08, Vol.9 (16), p.5767-5780
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ArticlesPeer ReviewedFull Text
Simultaneous localization and mapping with limited sensing using Extended Kalman Filter and Hough transform
Journal title:Tehnički vjesnik, 2016-11, Vol.23 (6)
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ArticlesPeer ReviewedFull Text
Simultaneous localization and mapping with limited sensing using extended kalman filter and hough transform/Simultano lokaliziranje i kartiranje s ogranicenom indikacijom odstupanja uz primjenu produl...
Author / Creator:Ozisik, Ozan ; Yavuz, Sirma
Publisher:University of Osijek
Journal title:Tehnički vjesnik, 2016-12, Vol.23 (6), p.1731
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ArticlesPeer ReviewedFull Text
Overlap of vitamin A and vitamin D target genes with CAKUT-related processes [version 1; peer review: 4 approved with reservations]
Author / Creator:Ozisik, Ozan ; Ehrhart, Friederike ; Evelo, Chris T ; Mantovani, Alberto ; Baudot, Anaı̈s
Journal title:F1000 research, 2021, Vol.10, p.395
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ArticlesPeer ReviewedFull Text
Overlap of vitamin A and vitamin D target genes with CAKUT-related processes [version 2; peer review: 2 approved, 2 approved with reservations] Overlap of vitamin A and vitamin D target genes with CAK...
Author / Creator:Chris T. Evelo ; Alberto Mantovani ; Anaı̈s Baudot ; Friederike Ehrhart ; Ozan Ozisik
Publisher:F1000 Research Ltd
Journal title:F1000 research, 2022-04, Vol.10
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ArticlesPeer ReviewedFull Text
Suprapatellar Fat Pad Impingement Syndrome Magnetic Resonance Imaging Findings: A Retrospective Study
Author / Creator:Balkanlı, Bahadır ; Arslan, Aydan ; Özışık, Ozan ; Özdemir, Hacı Mustafa ; Barutçu, Özlem
Journal title:Bezmialem science, 2023-09
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ArticlesFull Text
System-level analysis of genes mutated in muscular dystrophies reveals a functional pattern associated with muscle weakness distribution
Author / Creator:Ozisik, Ozan ; Gorokhova, Svetlana ; Cerino, Mathieu ; Bartoli, Marc ; Baudot, Anaïs
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2024-01
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ArticlesFull Text
Simultano lokaliziranje i kartiranje s ograničenom indikacijom odstupanja uz primjenu produljenog Kalman filtra i Hough transformacije
Author / Creator:Ozisik, Ozan ; Yavuz, Sirma
Publisher:Strojarski fakultet u Slavonskom Brodu; Fakultet elektrotehnike, računarstva i informacijskih tehnologija Osijek; Građevinski i arhitektonski fakultet Osijek
Journal title:Tehnički vjesnik, 2016-11, Vol.23 (6), p.1731
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ArticlesFull Text
A Scoring System to Evaluate the Impact of SNPs in a Path Related Context to Study Behcet's Disease Aetiology in Japanese Population
Author / Creator:Ozisik, Ozan ; Meguro, Akira ; Mizuki, Nobuhisa ; Diri, Banu ; Osman, Ugur Sezerman
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-05
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ArticlesFull Text
pathfindR: An R Package for Pathway Enrichment Analysis Utilizing Active Subnetworks
Author / Creator:Ege Ulgen ; Ozisik, Ozan ; Osman, Ugur Sezerman
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-03
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orsum: a Python package for filtering and comparing enrichment analyses using a simple principle

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System-level analysis of genes mutated in muscular dystrophies reveals a functional pattern associated with muscle weakness distribution

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Multi-omics analysis in inclusion body myositis identifies mir-16 responsible for HLA overexpression

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A collaborative network analysis for the interpretation of transcriptomics data in Huntington’s disease

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Magnetic Resonance Imaging Findings of Suprapatellar Fat Pad Impingement Syndrome: A Retrospective Study

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Integrative analysis of multi-omics data reveals importance of collagen and the PI3K AKT signalling pathway in CAKUT

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Overlap of vitamin A and vitamin D target genes with CAKUT-related processes [version 2; peer review: 2 approved, 2 approved with reservations]

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Progesterone at high doses reduces the growth of U87 and A172 glioblastoma cells: Proteomic changes regarding metabolism and immunity

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Simultaneous localization and mapping with limited sensing using Extended Kalman Filter and Hough transform

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Simultaneous localization and mapping with limited sensing using extended kalman filter and hough transform/Simultano lokaliziranje i kartiranje s ogranicenom indikacijom odstupanja uz primjenu produl...

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Overlap of vitamin A and vitamin D target genes with CAKUT-related processes [version 1; peer review: 4 approved with reservations]

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Overlap of vitamin A and vitamin D target genes with CAKUT-related processes [version 2; peer review: 2 approved, 2 approved with reservations] Overlap of vitamin A and vitamin D target genes with CAK...

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Suprapatellar Fat Pad Impingement Syndrome Magnetic Resonance Imaging Findings: A Retrospective Study

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System-level analysis of genes mutated in muscular dystrophies reveals a functional pattern associated with muscle weakness distribution

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Simultano lokaliziranje i kartiranje s ograničenom indikacijom odstupanja uz primjenu produljenog Kalman filtra i Hough transformacije

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A Scoring System to Evaluate the Impact of SNPs in a Path Related Context to Study Behcet's Disease Aetiology in Japanese Population

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pathfindR: An R Package for Pathway Enrichment Analysis Utilizing Active Subnetworks

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