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ArticlesPeer ReviewedFull Text
Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes
Author / Creator:Pan, Youlian ; Liu, Ziying ; Rocheleau, Hélène ; Fauteux, François ; Wang, Yunli ; McCartney, Curt ; Ouellet, Thérèse
Publisher:England: BioMed Central
Journal title:BMC genomics, 2018-08, Vol.19 (1), p.642-642, Article 642
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Identification of transcriptional subtypes in lung adenocarcinoma and squamous cell carcinoma through integrative analysis of microarray and RNA sequencing data
Author / Creator:Fauteux, François ; Surendra, Anuradha ; McComb, Scott ; Pan, Youlian ; Hill, Jennifer J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-04, Vol.11 (1), p.8709-8709, Article 8709
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Vascular contributions to 16p11.2 deletion autism syndrome modeled in mice
Author / Creator:Ouellette, Julie ; Toussay, Xavier ; Comin, Cesar H. ; Costa, Luciano da F. ; Ho, Mirabelle ; Lacalle-Aurioles, María ; Freitas-Andrade, Moises ; Liu, Qing Yan ; Leclerc, Sonia ; Pan, Youlian ; Liu, Ziying ; Thibodeau, Jean-François ; Yin, Melissa ; Carrier, Micael ; Morse, Cameron J. ; Dyken, Peter Van ; Bergin, Christopher J. ; Baillet, Sylvain ; Kennedy, Christopher R. ; Tremblay, Marie-Ève ; Benoit, Yannick D. ; Stanford, William L. ; Burger, Dylan ; Stewart, Duncan J. ; Lacoste, Baptiste
Publisher:New York: Nature Publishing Group US
Journal title:Nature neuroscience, 2020-09, Vol.23 (9), p.1090-1101
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Integrated transcriptome and hormone profiling highlight the role of multiple phytohormone pathways in wheat resistance against fusarium head blight
Author / Creator:Wang, Lipu ; Li, Qiang ; Liu, Ziying ; Surendra, Anu ; Pan, Youlian ; Li, Yifeng ; Zaharia, L. Irina ; Ouellet, Thérèse ; Fobert, Pierre R.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2018-11, Vol.13 (11), p.e0207036-e0207036
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Uncovering the lignin-degrading potential of Serratia quinivorans AORB19: insights from genomic analyses and alkaline lignin degradation
Author / Creator:Ali, Nadia Sufdar ; Thakur, Subarna ; Ye, Mengwei ; Monteil-Rivera, Fanny ; Pan, Youlian ; Qin, Wensheng ; Yang, Trent Chunzhong
Publisher:England: BioMed Central Ltd
Journal title:BMC microbiology, 2024-05, Vol.24 (1), p.181-17, Article 181
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Astroglial Hmgb1 regulates postnatal astrocyte morphogenesis and cerebrovascular maturation
Author / Creator:Freitas-Andrade, Moises ; Comin, Cesar H. ; Van Dyken, Peter ; Ouellette, Julie ; Raman-Nair, Joanna ; Blakeley, Nicole ; Liu, Qing Yan ; Leclerc, Sonia ; Pan, Youlian ; Liu, Ziying ; Carrier, Micaël ; Thakur, Karan ; Savard, Alexandre ; Rurak, Gareth M. ; Tremblay, Marie-Ève ; Salmaso, Natalina ; da F. Costa, Luciano ; Coppola, Gianfilippo ; Lacoste, Baptiste
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-08, Vol.14 (1), p.4965-4965, Article 4965
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Wheat transcriptome profiling reveals abscisic and gibberellic acid treatments regulate early-stage phytohormone defense signaling, cell wall fortification, and metabolic switches following Fusarium g...
Author / Creator:Buhrow, Leann M. ; Liu, Ziying ; Cram, Dustin ; Sharma, Tanya ; Foroud, Nora A. ; Pan, Youlian ; Loewen, Michele C.
Publisher:London: BioMed Central Ltd
Journal title:BMC genomics, 2021-11, Vol.22 (1), p.1-798, Article 798
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Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population
Author / Creator:Fauteux, François ; Wang, Yunli ; Rocheleau, Hélène ; Liu, Ziying ; Pan, Youlian ; Fedak, George ; McCartney, Curt ; Ouellet, Thérèse
Publisher:England: BioMed Central Ltd
Journal title:BMC plant biology, 2019-12, Vol.19 (1), p.536-536, Article 536
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Novel Transcriptional and Translational Biomarkers of Tularemia Vaccine Efficacy in a Mouse Inhalation Model: Proof of Concept
Author / Creator:Liu, Qing Yan ; Leclerc, Sonia ; Pan, Youlian ; Liu, Ziying ; Stark, Felicity ; Conlan, Joseph Wayne
Publisher:Switzerland: MDPI AG
Journal title:Microorganisms (Basel), 2021-12, Vol.10 (1), p.36
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Mining biological information from 3D short time-series gene expression data: the OPTricluster algorithm
Author / Creator:Tchagang, Alain B ; Phan, Sieu ; Famili, Fazel ; Shearer, Heather ; Fobert, Pierre ; Huang, Yi ; Zou, Jitao ; Huang, Daiqing ; Cutler, Adrian ; Liu, Ziying ; Pan, Youlian
Publisher:England: BioMed Central
Journal title:BMC bioinformatics, 2012-04, Vol.13 (1), p.54-54, Article 54
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Elucidating the biochemical basis of trans‐16:1 fatty acid change in leaves during cold acclimation in wheat
Author / Creator:Li, Qiang ; Shen, Wenyun ; Mavraganis, Ioannis ; Wang, Liping ; Gao, Peng ; Gao, Jie ; Cram, Dustin ; Li, Yifeng ; Liu, Ziying ; Fowler, David Brian ; Pan, Youlian ; Zou, Jitao
Publisher:United States: John Wiley & Sons, Inc
Journal title:Plant-environment interactions (Hoboken, N.J. : 2018), 2021-06, Vol.2 (3), p.101-111
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GOAL: A software tool for assessing biological significance of genes groups
Author / Creator:Tchagang, Alain B ; Gawronski, Alexander ; Bérubé, Hugo ; Phan, Sieu ; Famili, Fazel ; Pan, Youlian
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2010-05, Vol.11 (1), p.229-229, Article 229
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Probing the endosperm gene expression landscape in Brassica napus
Author / Creator:Huang, Yi ; Chen, Liang ; Wang, Liping ; Vijayan, Kannan ; Phan, Sieu ; Liu, Ziying ; Wan, Lianglu ; Ross, Andrew ; Xiang, Daoquan ; Datla, Raju ; Pan, Youlian ; Zou, Jitao
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2009-06, Vol.10 (1), p.256-256, Article 256
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ArticlesPeer ReviewedFull Text
Evolution of motif variants and positional bias of the cyclic-AMP response element
Author / Creator:Smith, Brandon ; Fang, Hung ; Pan, Youlian ; Walker, P Roy ; Famili, A Fazel ; Sikorska, Marianna
Publisher:England: BioMed Central Ltd
Journal title:BMC evolutionary biology, 2007-02, Vol.7 (Suppl 1), p.S15-S15
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ArticlesPeer ReviewedFull Text
Semi-supervised consensus clustering for gene expression data analysis
Author / Creator:Wang, Yunli ; Pan, Youlian
Publisher:England: BioMed Central Ltd
Journal title:BioData mining, 2014-05, Vol.7 (1), p.7-7, Article 7
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Predicting CRISPR-Cas9 off-target effects in human primary cells using bidirectional LSTM with BERT embedding
Author / Creator:Sari, Orhan ; Liu, Ziying ; Pan, Youlian ; Shao, Xiaojian
Publisher:England: Oxford University Press
Journal title:Bioinformatics advances, 2025, Vol.5 (1), p.vbae184
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Fluid–Structure Interaction Simulation of Aortic Valve Closure with Various Sinotubular Junction and Sinus Diameters
Author / Creator:Pan, Youlian ; Qiao, Aike ; Dong, Nianguo
Publisher:New York: Springer US
Journal title:Annals of biomedical engineering, 2015-06, Vol.43 (6), p.1363-1369
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Genome-Wide Identification and Characterization of RNA/DNA Differences Associated with Fusarium graminearum Infection in Wheat
Author / Creator:Yang, Guang ; Pan, Yan ; Zhao, Qinlong ; Huang, Jiaqian ; Pan, Wenqiu ; Cui, Licao ; Song, Weining ; Ouellet, Therese ; Pan, Youlian ; Nie, Xiaojun
Publisher:Basel: MDPI AG
Journal title:International journal of molecular sciences, 2022-07, Vol.23 (14), p.7982
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Prior knowledge guided eQTL mapping for identifying candidate genes
Author / Creator:Wang, Yunli ; Richard, Rene ; Pan, Youlian
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2016-12, Vol.17 (1), p.531-531, Article 531
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ArticlesPeer ReviewedFull Text
Bioinformatics identification of new targets for improving low temperature stress tolerance in spring and winter wheat
Author / Creator:Tchagang, Alain B. ; Fauteux, François ; Tulpan, Dan ; Pan, Youlian
Publisher:England: BioMed Central
Journal title:BMC bioinformatics, 2017-03, Vol.18 (1), p.174-174, Article 174
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Showing 1 to 20 of 34 results

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Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

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Identification of transcriptional subtypes in lung adenocarcinoma and squamous cell carcinoma through integrative analysis of microarray and RNA sequencing data

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Vascular contributions to 16p11.2 deletion autism syndrome modeled in mice

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Integrated transcriptome and hormone profiling highlight the role of multiple phytohormone pathways in wheat resistance against fusarium head blight

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Uncovering the lignin-degrading potential of Serratia quinivorans AORB19: insights from genomic analyses and alkaline lignin degradation

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Astroglial Hmgb1 regulates postnatal astrocyte morphogenesis and cerebrovascular maturation

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Wheat transcriptome profiling reveals abscisic and gibberellic acid treatments regulate early-stage phytohormone defense signaling, cell wall fortification, and metabolic switches following Fusarium g...

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Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

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Novel Transcriptional and Translational Biomarkers of Tularemia Vaccine Efficacy in a Mouse Inhalation Model: Proof of Concept

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Mining biological information from 3D short time-series gene expression data: the OPTricluster algorithm

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Elucidating the biochemical basis of trans‐16:1 fatty acid change in leaves during cold acclimation in wheat

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GOAL: A software tool for assessing biological significance of genes groups

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Probing the endosperm gene expression landscape in Brassica napus

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Evolution of motif variants and positional bias of the cyclic-AMP response element

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Semi-supervised consensus clustering for gene expression data analysis

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Predicting CRISPR-Cas9 off-target effects in human primary cells using bidirectional LSTM with BERT embedding

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Fluid–Structure Interaction Simulation of Aortic Valve Closure with Various Sinotubular Junction and Sinus Diameters

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Genome-Wide Identification and Characterization of RNA/DNA Differences Associated with Fusarium graminearum Infection in Wheat

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Prior knowledge guided eQTL mapping for identifying candidate genes

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Bioinformatics identification of new targets for improving low temperature stress tolerance in spring and winter wheat

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