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ArticlesPeer ReviewedFull Text
Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein
Author / Creator:Tenboer, Jason ; Basu, Shibom ; Zatsepin, Nadia ; Pande, Kanupriya ; Milathianaki, Despina ; Frank, Matthias ; Hunter, Mark ; Boutet, Sébastien ; Williams, Garth J. ; Koglin, Jason E. ; Oberthuer, Dominik ; Heymann, Michael ; Kupitz, Christopher ; Conrad, Chelsie ; Coe, Jesse ; Roy-Chowdhury, Shatabdi ; Weierstall, Uwe ; James, Daniel ; Wang, Dingjie ; Grant, Thomas ; Barty, Anton ; Yefanov, Oleksandr ; Scales, Jennifer ; Gati, Cornelius ; Seuring, Carolin ; Srajer, Vukica ; Henning, Robert ; Schwander, Peter ; Fromme, Raimund ; Ourmazd, Abbas ; Moffat, Keith ; Van Thor, Jasper J. ; Spence, John C. H. ; Fromme, Petra ; Chapman, Henry N. ; Schmidt, Marius
Publisher:United States: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2014-12, Vol.346 (6214), p.1242-1246
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Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein
Author / Creator:Pande, Kanupriya ; Hutchison, Christopher D. M. ; Groenhof, Gerrit ; Aquila, Andy ; Robinson, Josef S. ; Tenboer, Jason ; Basu, Shibom ; Boutet, Sébastien ; DePonte, Daniel P. ; Liang, Mengning ; White, Thomas A. ; Zatsepin, Nadia A. ; Yefanov, Oleksandr ; Morozov, Dmitry ; Oberthuer, Dominik ; Gati, Cornelius ; Subramanian, Ganesh ; James, Daniel ; Zhao, Yun ; Koralek, Jake ; Brayshaw, Jennifer ; Kupitz, Christopher ; Conrad, Chelsie ; Roy-Chowdhury, Shatabdi ; Coe, Jesse D. ; Metz, Markus ; Xavier, Paulraj Lourdu ; Grant, Thomas D. ; Koglin, Jason E. ; Ketawala, Gihan ; Fromme, Raimund ; Šrajer, Vukica ; Henning, Robert ; Spence, John C. H. ; Ourmazd, Abbas ; Schwander, Peter ; Weierstall, Uwe ; Frank, Matthias ; Fromme, Petra ; Barty, Anton ; Chapman, Henry N. ; Moffat, Keith ; van Thor, Jasper J. ; Schmidt, Marius
Publisher:United States: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2016-05, Vol.352 (6286), p.725-729
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Volume-conserving trans–cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
Author / Creator:Jung, Yang Ouk ; Lee, Jae Hyuk ; Kim, Joonghan ; Schmidt, Marius ; Moffat, Keith ; Šrajer, Vukica ; Ihee, Hyotcherl
Publisher:London: Nature Publishing Group UK
Journal title:Nature chemistry, 2013-03, Vol.5 (3), p.212-220
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Probing the early stages of photoreception in photoactive yellow protein with ultrafast time-domain Raman spectroscopy
Author / Creator:Kuramochi, Hikaru ; Takeuchi, Satoshi ; Yonezawa, Kento ; Kamikubo, Hironari ; Kataoka, Mikio ; Tahara, Tahei
Publisher:London: Nature Publishing Group UK
Journal title:Nature chemistry, 2017-07, Vol.9 (7), p.660-666
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Photoactive Yellow Protein Adsorption at Hydrated Polyethyleneimine and Poly-l-Glutamic Acid Interfaces
Author / Creator:Krekic, Szilvia ; Mero, Mark ; Kuhl, Michel ; Balasubramanian, Kannan ; Dér, András ; Heiner, Zsuzsanna
Publisher:Switzerland: MDPI AG
Journal title:Molecules (Basel, Switzerland), 2023-05, Vol.28 (10), p.4077
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Confinement in crystal lattice alters entire photocycle pathway of the Photoactive Yellow Protein
Author / Creator:Konold, Patrick E. ; Arik, Enis ; Weißenborn, Jörn ; Arents, Jos C. ; Hellingwerf, Klaas J. ; van Stokkum, Ivo H. M. ; Kennis, John T. M. ; Groot, Marie Louise
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-08, Vol.11 (1), p.4248-4248, Article 4248
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Low-barrier hydrogen bond in photoactive yellow protein
Author / Creator:Yamaguchi, Shigeo ; Kamikubo, Hironari ; Kurihara, Kazuo ; Kuroki, Ryota ; Niimura, Nobuo ; Shimizu, Nobutaka ; Yamazaki, Yoichi ; Kataoka, Mikio
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2009-01, Vol.106 (2), p.440-444
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Geometric and electronic structure probed along the isomerisation coordinate of a photoactive yellow protein chromophore
Author / Creator:Anstöter, Cate S. ; Curchod, Basile F. E. ; Verlet, Jan R. R.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-06, Vol.11 (1), p.2827-2827, Article 2827
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ArticlesPeer ReviewedFull Text
All-Optical Switching Demonstrated with Photoactive Yellow Protein Films
Author / Creator:Petrovszki, Dániel ; Krekic, Szilvia ; Valkai, Sándor ; Heiner, Zsuzsanna ; Dér, András
Publisher:Switzerland: MDPI AG
Journal title:Biosensors (Basel), 2021-10, Vol.11 (11), p.432
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Energetics of short hydrogen bonds in photoactive yellow protein
Author / Creator:Saito, Keisuke ; Ishikita, Hiroshi
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2012-01, Vol.109 (1), p.167-172
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Effect of Hydrated Ionic Liquid on Photocycle and Dynamics of Photoactive Yellow Protein
Author / Creator:Umezaki, Utana ; Hatakenaka, Miu ; Onodera, Kana ; Mizutani, Hiroto ; Kim, Suhyang ; Nakasone, Yusuke ; Terazima, Masahide ; Kimura, Yoshifumi
Publisher:Basel: MDPI AG
Journal title:Molecules (Basel, Switzerland), 2021-07, Vol.26 (15), p.4554
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Protonation Equilibrium in the Active Site of the Photoactive Yellow Protein
Author / Creator:Campomanes, Pablo ; Vanni, Stefano
Publisher:Switzerland: MDPI AG
Journal title:Molecules (Basel, Switzerland), 2021-04, Vol.26 (7), p.2025
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Neutron crystallography of photoactive yellow protein reveals unusual protonation state of Arg52 in the crystal
Author / Creator:Yonezawa, Kento ; Shimizu, Nobutaka ; Kurihara, Kazuo ; Yamazaki, Yoichi ; Kamikubo, Hironari ; Kataoka, Mikio
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-08, Vol.7 (1), p.9361-10, Article 9361
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ArticlesPeer ReviewedFull Text
Visualizing Reaction Pathways in Photoactive Yellow Protein from Nanoseconds to Seconds
Author / Creator:Ihee, Hyotcherl ; Rajagopal, Sudarshan ; Šrajer, Vukica ; Pahl, Reinhard ; Anderson, Spencer ; Schmidt, Marius ; Schotte, Friedrich ; Anfinrud, Philip A. ; Wulff, Michael ; Moffat, Keith ; Petsko, Gregory A.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2005-05, Vol.102 (20), p.7145-7150
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ArticlesPeer ReviewedFull Text
Predicting the reaction coordinates of millisecond light-induced conformational changes in photoactive yellow protein
Author / Creator:Vreede, Jocelyne ; Juraszek, Jarek ; Bolhuis, Peter G
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2010-02, Vol.107 (6), p.2397-2402
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Reply to 'Contradictions in X-ray structures of intermediates in the photocycle of photoactive yellow protein'
Author / Creator:Jung, Yang Ouk ; Lee, Jae Hyuk ; Kim, Joonghan ; Schmidt, Marius ; Moffat, Keith ; Šrajer, Vukica ; Ihee, Hyotcherl
Publisher:London: Nature Publishing Group UK
Journal title:Nature chemistry, 2014-04, Vol.6 (4), p.259-260
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Measurements of complex refractive index change of photoactive yellow protein over a wide wavelength range using hyperspectral quantitative phase imaging
Author / Creator:Lee, KyeoReh ; Kim, Youngmin ; Jung, JaeHwang ; Ihee, Hyotcherl ; Park, YongKeun
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2018-02, Vol.8 (1), p.3064-8, Article 3064
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Hydrogen bond dynamics in the active site of photoactive yellow protein
Author / Creator:Sigala, Paul A ; Tsuchida, Mark A ; Herschlag, Daniel
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2009-06, Vol.106 (23), p.9232-9237
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Absorption Spectra of Photoactive Yellow Protein Chromophores in Vacuum
Author / Creator:Nielsen, I.B. ; Boyé-Péronne, S. ; El Ghazaly, M.O.A. ; Kristensen, M.B. ; Brøndsted Nielsen, S. ; Andersen, L.H.
Publisher:United States: Elsevier Inc
Journal title:Biophysical journal, 2005-10, Vol.89 (4), p.2597-2604
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Contradictions in X-ray structures of intermediates in the photocycle of photoactive yellow protein
Author / Creator:Kaila, Ville R. I. ; Schotte, Friedrich ; Cho, Hyun Sun ; Hummer, Gerhard ; Anfinrud, Philip A.
Publisher:London: Nature Publishing Group UK
Journal title:Nature chemistry, 2014-04, Vol.6 (4), p.258-259
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Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein

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Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein

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Volume-conserving trans–cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography

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Probing the early stages of photoreception in photoactive yellow protein with ultrafast time-domain Raman spectroscopy

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Photoactive Yellow Protein Adsorption at Hydrated Polyethyleneimine and Poly-l-Glutamic Acid Interfaces

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Confinement in crystal lattice alters entire photocycle pathway of the Photoactive Yellow Protein

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Low-barrier hydrogen bond in photoactive yellow protein

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Geometric and electronic structure probed along the isomerisation coordinate of a photoactive yellow protein chromophore

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All-Optical Switching Demonstrated with Photoactive Yellow Protein Films

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Energetics of short hydrogen bonds in photoactive yellow protein

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Effect of Hydrated Ionic Liquid on Photocycle and Dynamics of Photoactive Yellow Protein

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Protonation Equilibrium in the Active Site of the Photoactive Yellow Protein

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Neutron crystallography of photoactive yellow protein reveals unusual protonation state of Arg52 in the crystal

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Visualizing Reaction Pathways in Photoactive Yellow Protein from Nanoseconds to Seconds

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Predicting the reaction coordinates of millisecond light-induced conformational changes in photoactive yellow protein

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Reply to 'Contradictions in X-ray structures of intermediates in the photocycle of photoactive yellow protein'

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Measurements of complex refractive index change of photoactive yellow protein over a wide wavelength range using hyperspectral quantitative phase imaging

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Hydrogen bond dynamics in the active site of photoactive yellow protein

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Absorption Spectra of Photoactive Yellow Protein Chromophores in Vacuum

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Contradictions in X-ray structures of intermediates in the photocycle of photoactive yellow protein

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