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ArticlesPeer ReviewedFull Text
Integrating molecular QTL data into genome-wide genetic association analysis: Probabilistic assessment of enrichment and colocalization
Author / Creator:Wen, Xiaoquan ; Pique-Regi, Roger ; Luca, Francesca
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2017-03, Vol.13 (3), p.e1006646-e1006646
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A fast and accurate method to detect allelic genomic imbalances underlying mosaic rearrangements using SNP array data
Author / Creator:González, Juan R ; Rodríguez-Santiago, Benjamín ; Cáceres, Alejandro ; Pique-Regi, Roger ; Rothman, Nathaniel ; Chanock, Stephen J ; Armengol, Lluís ; Pérez-Jurado, Luis A
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2011-05, Vol.12 (1), p.166-166, Article 166
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Does the human placenta express the canonical cell entry mediators for SARS-CoV-2?
Author / Creator:Pique-Regi, Roger ; Romero, Roberto ; Tarca, Adi L ; Luca, Francesca ; Xu, Yi ; Alazizi, Adnan ; Leng, Yaozhu ; Hsu, Chaur-Dong ; Gomez-Lopez, Nardhy
Publisher:England: eLife Science Publications, Ltd
Journal title:eLife, 2020-07, Vol.9
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Single cell transcriptional signatures of the human placenta in term and preterm parturition
Author / Creator:Pique-Regi, Roger ; Romero, Roberto ; Tarca, Adi L ; Sendler, Edward D ; Xu, Yi ; Garcia-Flores, Valeria ; Leng, Yaozhu ; Luca, Francesca ; Hassan, Sonia S ; Gomez-Lopez, Nardhy
Publisher:England: eLife Science Publications, Ltd
Journal title:eLife, 2019-12, Vol.8
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Cross-Population Joint Analysis of eQTLs: Fine Mapping and Functional Annotation
Author / Creator:Wen, Xiaoquan ; Luca, Francesca ; Pique-Regi, Roger
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2015-04, Vol.11 (4), p.e1005176-e1005176
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Maternal-fetal immune responses in pregnant women infected with SARS-CoV-2
Author / Creator:Garcia-Flores, Valeria ; Romero, Roberto ; Xu, Yi ; Theis, Kevin R. ; Arenas-Hernandez, Marcia ; Miller, Derek ; Peyvandipour, Azam ; Bhatti, Gaurav ; Galaz, Jose ; Gershater, Meyer ; Levenson, Dustyn ; Pusod, Errile ; Tao, Li ; Kracht, David ; Florova, Violetta ; Leng, Yaozhu ; Motomura, Kenichiro ; Para, Robert ; Faucett, Megan ; Hsu, Chaur-Dong ; Zhang, Gary ; Tarca, Adi L. ; Pique-Regi, Roger ; Gomez-Lopez, Nardhy
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-01, Vol.13 (1), p.320-320
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PTWAS: investigating tissue-relevant causal molecular mechanisms of complex traits using probabilistic TWAS analysis
Author / Creator:Zhang, Yuhua ; Quick, Corbin ; Yu, Ketian ; Barbeira, Alvaro ; Luca, Francesca ; Pique-Regi, Roger ; Kyung Im, Hae ; Wen, Xiaoquan
Publisher:England: BioMed Central
Journal title:Genome Biology, 2020-09, Vol.21 (1), p.232-232, Article 232
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Deconstructing cold-induced brown adipocyte neogenesis in mice
Author / Creator:Burl, Rayanne B ; Rondini, Elizabeth Ann ; Wei, Hongguang ; Pique-Regi, Roger ; Granneman, James G
Publisher:England: eLife Sciences Publications, Ltd
Journal title:eLife, 2022-07, Vol.11
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Multi-INTACT: integrative analysis of the genome, transcriptome, and proteome identifies causal mechanisms of complex traits
Author / Creator:Okamoto, Jeffrey ; Yin, Xianyong ; Ryan, Brady ; Chiou, Joshua ; Luca, Francesca ; Pique-Regi, Roger ; Im, Hae Kyung ; Morrison, Jean ; Burant, Charles ; Fauman, Eric B. ; Laakso, Markku ; Boehnke, Michael ; Wen, Xiaoquan
Publisher:England: BioMed Central
Journal title:Genome Biology, 2025-02, Vol.26 (1), p.19-19, Article 19
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Comprehensive analysis of the functional impact of single nucleotide variants of human CHEK2
Author / Creator:McCarthy-Leo, Claire E. ; Brush, George S. ; Pique-Regi, Roger ; Luca, Francesca ; Tainsky, Michael A. ; Finley, Russell L.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2024-08, Vol.20 (8), p.e1011375
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The amniotic fluid proteome changes with gestational age in normal pregnancy: a cross-sectional study
Author / Creator:Bhatti, Gaurav ; Romero, Roberto ; Gomez-Lopez, Nardhy ; Chaiworapongsa, Tinnakorn ; Jung, Eunjung ; Gotsch, Francesca ; Pique-Regi, Roger ; Pacora, Percy ; Hsu, Chaur-Dong ; Kavdia, Mahendra ; Tarca, Adi L.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-01, Vol.12 (1), p.601-601, Article 601
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Single nucleus transcriptomics of ventral midbrain identifies glial activation associated with chronic opioid use disorder
Author / Creator:Wei, Julong ; Lambert, Tova Y. ; Valada, Aditi ; Patel, Nikhil ; Walker, Kellie ; Lenders, Jayna ; Schmidt, Carl J. ; Iskhakova, Marina ; Alazizi, Adnan ; Mair-Meijers, Henriette ; Mash, Deborah C. ; Luca, Francesca ; Pique-Regi, Roger ; Bannon, Michael J. ; Akbarian, Schahram
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-09, Vol.14 (1), p.5610-13, Article 5610
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RNA-sequencing Identifies Novel Pathways in Sarcoidosis Monocytes
Author / Creator:Talreja, Jaya ; Farshi, Pershang ; Alazizi, Adnan ; Luca, Francesca ; Pique-Regi, Roger ; Samavati, Lobelia
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-06, Vol.7 (1), p.2720-10, Article 2720
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Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions
Author / Creator:Findley, Anthony S ; Monziani, Alan ; Richards, Allison L ; Rhodes, Katherine ; Ward, Michelle C ; Kalita, Cynthia A ; Alazizi, Adnan ; Pazokitoroudi, Ali ; Sankararaman, Sriram ; Wen, Xiaoquan ; Lanfear, David E ; Pique-Regi, Roger ; Gilad, Yoav ; Luca, Francesca
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2021-05, Vol.10
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A signature of Neanderthal introgression on molecular mechanisms of environmental responses
Author / Creator:Findley, Anthony S. ; Zhang, Xinjun ; Boye, Carly ; Lin, Yen Lung ; Kalita, Cynthia A. ; Barreiro, Luis ; Lohmueller, Kirk E. ; Pique-Regi, Roger ; Luca, Francesca
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2021-09, Vol.17 (9), p.e1009493
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Analysis of transcriptional changes in the immune system associated with pubertal development in a longitudinal cohort of children with asthma
Author / Creator:Resztak, Justyna A. ; Choe, Jane ; Nirmalan, Shreya ; Wei, Julong ; Bruinsma, Julian ; Houpt, Russell ; Alazizi, Adnan ; Mair-Meijers, Henriette E. ; Wen, Xiaoquan ; Slatcher, Richard B. ; Zilioli, Samuele ; Pique-Regi, Roger ; Luca, Francesca
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-01, Vol.14 (1), p.230-14, Article 230
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The amniotic fluid cell-free transcriptome in spontaneous preterm labor
Author / Creator:Bhatti, Gaurav ; Romero, Roberto ; Gomez-Lopez, Nardhy ; Pique-Regi, Roger ; Pacora, Percy ; Jung, Eunjung ; Yeo, Lami ; Hsu, Chaur-Dong ; Kavdia, Mahendra ; Tarca, Adi L.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-06, Vol.11 (1), p.13481-13481, Article 13481
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The amniotic fluid proteome changes with term labor and informs biomarker discovery in maternal plasma
Author / Creator:Bhatti, Gaurav ; Romero, Roberto ; Gomez-Lopez, Nardhy ; Chaiworapongsa, Tinnakorn ; Than, Nandor Gabor ; Theis, Kevin R. ; Galaz, Jose ; Gotsch, Francesca ; Pique-Regi, Roger ; Berry, Stanley M. ; Kavdia, Mahendra ; Tarca, Adi L.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2023-02, Vol.13 (1), p.3136-3136, Article 3136
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RNA Sequencing Reveals Diverse Functions of Amniotic Fluid Neutrophils and Monocytes/Macrophages in Intra-Amniotic Infection
Author / Creator:Gomez-Lopez, Nardhy ; Romero, Roberto ; Varrey, Aneesha ; Leng, Yaozhu ; Miller, Derek ; Done, Bogdan ; Xu, Yi ; Bhatti, Gaurav ; Motomura, Kenichiro ; Gershater, Meyer ; Pique-Regi, Roger ; Tarca, Adi L.
Publisher:Basel, Switzerland: S. Karger AG
Journal title:Journal of innate immunity, 2021-03, Vol.13 (2), p.63-82
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Characterization of caffeine response regulatory variants in vascular endothelial cells
Author / Creator:Boye, Carly ; Kalita, Cynthia A ; Findley, Anthony S ; Alazizi, Adnan ; Wei, Julong ; Wen, Xiaoquan ; Pique-Regi, Roger ; Luca, Francesca
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2024-02, Vol.13
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Showing 1 to 20 of 88 results

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Integrating molecular QTL data into genome-wide genetic association analysis: Probabilistic assessment of enrichment and colocalization

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A fast and accurate method to detect allelic genomic imbalances underlying mosaic rearrangements using SNP array data

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Does the human placenta express the canonical cell entry mediators for SARS-CoV-2?

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Single cell transcriptional signatures of the human placenta in term and preterm parturition

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Cross-Population Joint Analysis of eQTLs: Fine Mapping and Functional Annotation

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Maternal-fetal immune responses in pregnant women infected with SARS-CoV-2

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PTWAS: investigating tissue-relevant causal molecular mechanisms of complex traits using probabilistic TWAS analysis

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Deconstructing cold-induced brown adipocyte neogenesis in mice

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Multi-INTACT: integrative analysis of the genome, transcriptome, and proteome identifies causal mechanisms of complex traits

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Comprehensive analysis of the functional impact of single nucleotide variants of human CHEK2

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The amniotic fluid proteome changes with gestational age in normal pregnancy: a cross-sectional study

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Single nucleus transcriptomics of ventral midbrain identifies glial activation associated with chronic opioid use disorder

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RNA-sequencing Identifies Novel Pathways in Sarcoidosis Monocytes

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Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions

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A signature of Neanderthal introgression on molecular mechanisms of environmental responses

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Analysis of transcriptional changes in the immune system associated with pubertal development in a longitudinal cohort of children with asthma

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The amniotic fluid cell-free transcriptome in spontaneous preterm labor

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The amniotic fluid proteome changes with term labor and informs biomarker discovery in maternal plasma

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RNA Sequencing Reveals Diverse Functions of Amniotic Fluid Neutrophils and Monocytes/Macrophages in Intra-Amniotic Infection

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Characterization of caffeine response regulatory variants in vascular endothelial cells

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