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Exploring the sequence determinants of amyloid structure using position-specific scoring matrices
Author / Creator:Maurer-Stroh, Sebastian ; Debulpaep, Maja ; Kuemmerer, Nico ; de la Paz, Manuela Lopez ; Martins, Ivo Cristiano ; Reumers, Joke ; Morris, Kyle L ; Copland, Alastair ; Serpell, Louise ; Serrano, Luis ; Schymkowitz, Joost W H ; Rousseau, Frederic
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2010-03, Vol.7 (3), p.237-242
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Adaptable probabilistic mapping of short reads using position specific scoring matrices
Author / Creator:Kerpedjiev, Peter ; Frellsen, Jes ; Lindgreen, Stinus ; Krogh, Anders
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2014-04, Vol.15 (1), p.100-100, Article 100
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3DCONS-DB: A Database of Position-Specific Scoring Matrices in Protein Structures
Author / Creator:Sanchez-Garcia, Ruben ; Sorzano, Carlos ; Carazo, Jose ; Segura, Joan
Publisher:Switzerland: MDPI AG
Journal title:Molecules (Basel, Switzerland), 2017-12, Vol.22 (12), p.2230
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Fast index based algorithms and software for matching position specific scoring matrices
Author / Creator:Beckstette, Michael ; Homann, Robert ; Giegerich, Robert ; Kurtz, Stefan
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2006-08, Vol.7 (1), p.389-389, Article 389
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A library of sensitive position-specific scoring matrices for high-throughput identification of nuclear pore complex subunits
Author / Creator:Ioannides, Andreas N ; Katsani, Katerina R ; Ouzounis, Christos A ; Promponas, Vasilis J
Publisher:England: Oxford University Press
Journal title:NAR genomics and bioinformatics, 2023-03, Vol.5 (1), p.lqad025-lqad025
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Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning
Author / Creator:Alipanahi, Babak ; Delong, Andrew ; Weirauch, Matthew T ; Frey, Brendan J
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2015-08, Vol.33 (8), p.831-838
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Target-DBPPred: An intelligent model for prediction of DNA-binding proteins using discrete wavelet transform based compression and light eXtreme gradient boosting
Author / Creator:Ali, Farman ; Kumar, Harish ; Patil, Shruti ; Kotecha, Ketan ; Banjar, Ameen ; Daud, Ali
Publisher:United States: Elsevier Ltd
Journal title:Computers in biology and medicine, 2022-06, Vol.145, p.105533-105533, Article 105533
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Assessing the convergent validity between the automated emotion recognition software Noldus FaceReader 7 and Facial Action Coding System Scoring
Author / Creator:Skiendziel, Tanja ; Rösch, Andreas G. ; Schultheiss, Oliver C.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-10, Vol.14 (10), p.e0223905-e0223905
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PCVMZM: Using the Probabilistic Classification Vector Machines Model Combined with a Zernike Moments Descriptor to Predict Protein–Protein Interactions from Protein Sequences
Author / Creator:Wang, Yanbin ; You, Zhuhong ; Li, Xiao ; Chen, Xing ; Jiang, Tonghai ; Zhang, Jingting
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2017-05, Vol.18 (5), p.1029
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A Treatise to Computational Approaches Towards Prediction of Membrane Protein and Its Subtypes
Author / Creator:Butt, Ahmad Hassan ; Rasool, Nouman ; Khan, Yaser Daanial
Publisher:New York: Springer US
Journal title:The Journal of membrane biology, 2017-02, Vol.250 (1), p.55-76
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NeuroPred-FRL: an interpretable prediction model for identifying neuropeptide using feature representation learning
Author / Creator:Hasan, Md Mehedi ; Alam, Md Ashad ; Shoombuatong, Watshara ; Deng, Hong-Wen ; Manavalan, Balachandran ; Kurata, Hiroyuki
Publisher:England
Journal title:Briefings in bioinformatics, 2021-11, Vol.22 (6)
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Simple adjustment of the sequence weight algorithm remarkably enhances PSI-BLAST performance
Author / Creator:Oda, Toshiyuki ; Lim, Kyungtaek ; Tomii, Kentaro
Publisher:England: BioMed Central
Journal title:BMC bioinformatics, 2017-06, Vol.18 (1), p.288-288, Article 288
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Nature of Protein Family Signatures: Insights from Singular Value Analysis of Position-Specific Scoring Matrices
Author / Creator:Kinjo, Akira R. ; Nakamura, Haruki
Publisher:United States: Public Library of Science
Journal title:PloS one, 2008-04, Vol.3 (4), p.e1963-e1963
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Corrigendum: exploring the sequence determinants of amyloid structure using position-specific scoring matrices
Author / Creator:Maurer-stroh, Sebastian ; Debulpaep, Maja ; Kuemmerer, Nico ; De La Paz, Manuela Lopez ; Martins, Ivo Cristiano ; Reumers, Joke ; Morris, Kyle L ; Copland, Alastair ; Serpell, Louise ; Serrano, Luis ; Schymkowitz, Joost W H ; Rousseau, Frederic
Publisher:New York: Nature Publishing Group
Journal title:Nature methods, 2010-10, Vol.7 (10), p.855
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Correction: Corrigendum: Exploring the sequence determinants of amyloid structure using position-specific scoring matrices
Author / Creator:Maurer-Stroh, Sebastian ; Debulpaep, Maja ; Kuemmerer, Nico ; de la Paz, Manuela Lopez ; Martins, Ivo Cristiano ; Reumers, Joke ; Morris, Kyle L ; Copland, Alastair ; Serpell, Louise ; Serrano, Luis ; Schymkowitz, Joost W H ; Rousseau, Frederic
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2010-10, Vol.7 (10), p.855-855
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ArticlesPeer ReviewedFull Text
Addendum: Exploring the sequence determinants of amyloid structure using position-specific scoring matrices
Author / Creator:Maurer-Stroh, Sebastian ; Debulpaep, Maja ; Kuemmerer, Nico ; de la Paz, Manuela Lopez ; Martins, Ivo Cristiano ; Reumers, Joke ; Morris, Kyle L ; Copland, Alastair ; Serpell, Louise ; Serrano, Luis ; Schymkowitz, Joost W H ; Rousseau, Frederic
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2010-10, Vol.7 (10), p.855-857
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Erratum: Corrigendum: Exploring the sequence determinants of amyloid structure using position-specific scoring matrices
Author / Creator:Maurer-Stroh, Sebastian ; Debulpaep, Maja ; Kuemmerer, Nico ; de la Paz, Manuela Lopez ; Martins, Ivo Cristiano ; Reumers, Joke ; Morris, Kyle L ; Copland, Alastair ; Serpell, Louise ; Serrano, Luis ; Schymkowitz, Joost W H ; Rousseau, Frederic
Journal title:Nature methods, 2010-09, Vol.7 (10), p.855-855
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ArticlesPeer ReviewedFull Text
The Neisseria meningitidis CRISPR-Cas9 System Enables Specific Genome Editing in Mammalian Cells
Author / Creator:Lee, Ciaran M ; Cradick, Thomas J ; Bao, Gang
Publisher:United States: Elsevier Inc
Journal title:Molecular therapy, 2016-03, Vol.24 (3), p.645-654
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Emergence of a novel mobile colistin resistance gene, mcr-8, in NDM-producing Klebsiella pneumoniae
Author / Creator:Wang, Xiaoming ; Wang, Yao ; Zhou, Ying ; Li, Jiyun ; Yin, Wenjuan ; Wang, Shaolin ; Zhang, Suxia ; Shen, Jianzhong ; Shen, Zhangqi ; Wang, Yang
Publisher:United States: Taylor & Francis
Journal title:Emerging microbes & infections, 2018-07, Vol.7 (1), p.1-9
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StackedEnC-AOP: prediction of antioxidant proteins using transform evolutionary and sequential features based multi-scale vector with stacked ensemble learning
Author / Creator:Rukh, Gul ; Akbar, Shahid ; Rehman, Gauhar ; Alarfaj, Fawaz Khaled ; Zou, Quan
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2024-08, Vol.25 (1), p.256-22, Article 256
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Showing 1 to 20 of 584 results

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Exploring the sequence determinants of amyloid structure using position-specific scoring matrices

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Adaptable probabilistic mapping of short reads using position specific scoring matrices

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3DCONS-DB: A Database of Position-Specific Scoring Matrices in Protein Structures

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Fast index based algorithms and software for matching position specific scoring matrices

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A library of sensitive position-specific scoring matrices for high-throughput identification of nuclear pore complex subunits

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Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning

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Target-DBPPred: An intelligent model for prediction of DNA-binding proteins using discrete wavelet transform based compression and light eXtreme gradient boosting

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Assessing the convergent validity between the automated emotion recognition software Noldus FaceReader 7 and Facial Action Coding System Scoring

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PCVMZM: Using the Probabilistic Classification Vector Machines Model Combined with a Zernike Moments Descriptor to Predict Protein–Protein Interactions from Protein Sequences

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A Treatise to Computational Approaches Towards Prediction of Membrane Protein and Its Subtypes

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NeuroPred-FRL: an interpretable prediction model for identifying neuropeptide using feature representation learning

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Simple adjustment of the sequence weight algorithm remarkably enhances PSI-BLAST performance

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Nature of Protein Family Signatures: Insights from Singular Value Analysis of Position-Specific Scoring Matrices

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Corrigendum: exploring the sequence determinants of amyloid structure using position-specific scoring matrices

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Correction: Corrigendum: Exploring the sequence determinants of amyloid structure using position-specific scoring matrices

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Addendum: Exploring the sequence determinants of amyloid structure using position-specific scoring matrices

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Erratum: Corrigendum: Exploring the sequence determinants of amyloid structure using position-specific scoring matrices

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The Neisseria meningitidis CRISPR-Cas9 System Enables Specific Genome Editing in Mammalian Cells

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Emergence of a novel mobile colistin resistance gene, mcr-8, in NDM-producing Klebsiella pneumoniae

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StackedEnC-AOP: prediction of antioxidant proteins using transform evolutionary and sequential features based multi-scale vector with stacked ensemble learning

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