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The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
Author / Creator:Du, Kang ; Stöck, Matthias ; Kneitz, Susanne ; Klopp, Christophe ; Woltering, Joost M. ; Adolfi, Mateus Contar ; Feron, Romain ; Prokopov, Dmitry ; Makunin, Alexey ; Kichigin, Ilya ; Schmidt, Cornelia ; Fischer, Petra ; Kuhl, Heiner ; Wuertz, Sven ; Gessner, Jörn ; Kloas, Werner ; Cabau, Cédric ; Iampietro, Carole ; Parrinello, Hugues ; Tomlinson, Chad ; Journot, Laurent ; Postlethwait, John H. ; Braasch, Ingo ; Trifonov, Vladimir ; Warren, Wesley C. ; Meyer, Axel ; Guiguen, Yann ; Schartl, Manfred
Publisher:London: Nature Publishing Group UK
Journal title:Nature ecology & evolution, 2020-06, Vol.4 (6), p.841-852
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Transposable elements as genome regulators in normal and malignant haematopoiesis
Author / Creator:Prokopov, Dmitry ; Tunbak, Hale ; Leddy, Eve ; Drylie, Bryce ; Camera, Francesco ; Deniz, Özgen
Publisher:London: Nature Publishing Group UK
Journal title:Blood cancer journal (New York), 2025-05, Vol.15 (1), p.87-12, Article 87
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Robertsonian fusion triggers recombination suppression on sex chromosomes in Coleonyx geckos
Author / Creator:Lisachov, Artem ; Tishakova, Katerina ; Romanenko, Svetlana ; Lisachova, Lada ; Davletshina, Guzel ; Prokopov, Dmitry ; Kratochvíl, Lukáš ; O`Brien, Patricia ; Ferguson-Smith, Malcolm ; Borodin, Pavel ; Trifonov, Vladimir
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2023-09, Vol.13 (1), p.15502-15502, Article 15502
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Conservation of Major Satellite DNAs in Snake Heterochromatin
Author / Creator:Lisachov, Artem ; Rumyantsev, Alexander ; Prokopov, Dmitry ; Ferguson-Smith, Malcolm ; Trifonov, Vladimir
Publisher:Switzerland: MDPI AG
Journal title:Animals (Basel), 2023-01, Vol.13 (3), p.334
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Complex Structure of Lasiopodomys mandarinus vinogradovi Sex Chromosomes, Sex Determination, and Intraspecific Autosomal Polymorphism
Author / Creator:Romanenko, Svetlana A. ; Smorkatcheva, Antonina V. ; Kovalskaya, Yulia M. ; Prokopov, Dmitry Yu ; Lemskaya, Natalya A. ; Gladkikh, Olga L. ; Polikarpov, Ivan A. ; Serdyukova, Natalia A. ; Trifonov, Vladimir A. ; Molodtseva, Anna S. ; O’Brien, Patricia C. M. ; Golenishchev, Feodor N. ; Ferguson-Smith, Malcolm A. ; Graphodatsky, Alexander S.
Publisher:Switzerland: MDPI AG
Journal title:Genes, 2020-03, Vol.11 (4), p.374
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Effects of Mutations in the Drosophila melanogaster Rif1 Gene on the Replication and Underreplication of Pericentromeric Heterochromatin in Salivary Gland Polytene Chromosomes
Author / Creator:Kolesnikova, Tatyana D. ; Kolodyazhnaya, Alexandra V. ; Pokholkova, Galina V. ; Schubert, Veit ; Dovgan, Viktoria V. ; Romanenko, Svetlana A. ; Prokopov, Dmitry Yu ; Zhimulev, Igor F.
Publisher:Switzerland: MDPI AG
Journal title:Cells (Basel, Switzerland), 2020-06, Vol.9 (6), p.1501
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The Cytogenetic Map of the Nile Crocodile (Crocodylus niloticus, Crocodylidae, Reptilia) with Fluorescence In Situ Localization of Major Repetitive DNAs
Author / Creator:Romanenko, Svetlana A. ; Prokopov, Dmitry Yu ; Proskuryakova, Anastasia A. ; Davletshina, Guzel I. ; Tupikin, Alexey E. ; Kasai, Fumio ; Ferguson-Smith, Malcolm A. ; Trifonov, Vladimir A.
Publisher:Basel: MDPI AG
Journal title:International journal of molecular sciences, 2022-11, Vol.23 (21), p.13063
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Identification of Iguania Ancestral Syntenic Blocks and Putative Sex Chromosomes in the Veiled Chameleon (Chamaeleo calyptratus, Chamaeleonidae, Iguania)
Author / Creator:Tishakova, Katerina V. ; Prokopov, Dmitry Yu ; Davletshina, Guzel I. ; Rumyantsev, Alexander V. ; O’Brien, Patricia C. M. ; Ferguson-Smith, Malcolm A. ; Giovannotti, Massimo ; Lisachov, Artem P. ; Trifonov, Vladimir A.
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2022-12, Vol.23 (24), p.15838
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Maps of Constitutive-Heterochromatin Distribution for Four Martes Species (Mustelidae, Carnivora, Mammalia) Show the Formative Role of Macrosatellite Repeats in Interspecific Variation of Chromosome S...
Author / Creator:Beklemisheva, Violetta R. ; Lemskaya, Natalya A. ; Prokopov, Dmitry Yu ; Perelman, Polina L. ; Romanenko, Svetlana A. ; Proskuryakova, Anastasia A. ; Serdyukova, Natalya A. ; Utkin, Yaroslav A. ; Nie, Wenhui ; Ferguson-Smith, Malcolm A. ; Yang, Fentang ; Graphodatsky, Alexander S.
Publisher:Switzerland: MDPI AG
Journal title:Genes, 2023-02, Vol.14 (2), p.489
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ArticlesPeer ReviewedFull Text
Sequencing of Supernumerary Chromosomes of Red Fox and Raccoon Dog Confirms a Non-Random Gene Acquisition by B Chromosomes
Author / Creator:Makunin, Alexey I. ; Romanenko, Svetlana A. ; Beklemisheva, Violetta R. ; Perelman, Polina L. ; Druzhkova, Anna S. ; Petrova, Kristina O. ; Prokopov, Dmitry Yu ; Chernyaeva, Ekaterina N. ; Johnson, Jennifer L. ; Kukekova, Anna V. ; Yang, Fengtang ; Ferguson-Smith, Malcolm A. ; Graphodatsky, Alexander S. ; Trifonov, Vladimir A.
Publisher:Switzerland: MDPI AG
Journal title:Genes, 2018-08, Vol.9 (8), p.405
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A rare familial rearrangement of chromosomes 9 and 15 associated with intellectual disability: a clinical and molecular study
Author / Creator:Lemskaya, Natalya A. ; Romanenko, Svetlana A. ; Rezakova, Mariia A. ; Filimonova, Elena A. ; Prokopov, Dmitry Yu ; Dolskiy, Alexander A. ; Perelman, Polina L. ; Maksimova, Yulia V. ; Shorina, Asia R. ; Yudkin, Dmitry V.
Publisher:London: BioMed Central Ltd
Journal title:Molecular cytogenetics, 2021-10, Vol.14 (1), p.1-47, Article 47
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ArticlesPeer ReviewedFull Text
Evolution of MicroRNA Biogenesis Genes in the Sterlet (Acipenser ruthenus) and Other Polyploid Vertebrates
Author / Creator:Fofanov, Mikhail V. ; Prokopov, Dmitry Yu ; Kuhl, Heiner ; Schartl, Manfred ; Trifonov, Vladimir A.
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2020-12, Vol.21 (24), p.9562
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Chromosome-Level Genome Assemblies Expand Capabilities of Genomics for Conservation Biology
Author / Creator:Totikov, Azamat ; Tomarovsky, Andrey ; Prokopov, Dmitry ; Yakupova, Aliya ; Bulyonkova, Tatiana ; Derezanin, Lorena ; Rasskazov, Dmitry ; Wolfsberger, Walter W. ; Koepfli, Klaus-Peter ; Oleksyk, Taras K. ; Kliver, Sergei
Publisher:Switzerland: MDPI AG
Journal title:Genes, 2021-08, Vol.12 (9), p.1336
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Amplified Fragments of an Autosome-Borne Gene Constitute a Significant Component of the W Sex Chromosome of Eremias velox (Reptilia, Lacertidae)
Author / Creator:Lisachov, Artem ; Andreyushkova, Daria ; Davletshina, Guzel ; Prokopov, Dmitry ; Romanenko, Svetlana ; Galkina, Svetlana ; Saifitdinova, Alsu ; Simonov, Evgeniy ; Borodin, Pavel ; Trifonov, Vladimir
Publisher:Switzerland: MDPI AG
Journal title:Genes, 2021-05, Vol.12 (5), p.779
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Maps of Constitutive-Heterochromatin Distribution for Four IMartes/I Species Show the Formative Role of Macrosatellite Repeats in Interspecific Variation of Chromosome Structure
Author / Creator:Beklemisheva, Violetta R ; Lemskaya, Natalya A ; Prokopov, Dmitry Yu ; Perelman, Polina L ; Romanenko, Svetlana A ; Proskuryakova, Anastasia A ; Serdyukova, Natalya A ; Utkin, Yaroslav A ; Nie, Wenhui ; Ferguson-Smith, Malcolm A ; Yang, Fentang ; Graphodatsky, Alexander S
Publisher:MDPI AG
Journal title:Genes, 2023-02, Vol.14 (2)
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Chromosome Distribution of Highly Conserved Tandemly Arranged Repetitive DNAs in the Siberian Sturgeon (Acipenser baerii)
Author / Creator:Biltueva, Larisa S. ; Prokopov, Dmitry Yu ; Romanenko, Svetlana A. ; Interesova, Elena A. ; Schartl, Manfred ; Trifonov, Vladimir A.
Publisher:Switzerland: MDPI AG
Journal title:Genes, 2020-11, Vol.11 (11), p.1375
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Whole-chromosome fusions in the karyotype evolution of Sceloporus (Iguania, Reptilia) are more intense in sex chromosomes than autosomes
Author / Creator:Lisachov, Artem ; Tishakova, Katerina ; Romanenko, Svetlana ; Molodtseva, Anna ; Prokopov, Dmitry ; Pereira, Jorge ; Ferguson-Smith, Malcolm ; Borodin, Pavel ; Trifonov, Vladimir
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-04
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Genomic Underground: Unraveling NUMTs in Mole Voles
Author / Creator:Prokopov, Dmitry ; Saluev, Tigran ; Romanenko, Svetlana ; Bakloushinskaya, Irina ; Graphodatsky, Alexander
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2023-12
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A 180 My-old female-specific genome region in sturgeon reveals the oldest known vertebrate sex determining system with undifferentiated sex chromosomes
Author / Creator:Kuhl, Heiner ; Guiguen, Yann ; Höhne, Christin ; Kreuz, Eva ; Du, Kang ; Klopp, Christophe ; Lopez-Roques, Céline ; Yebra-Pimentel, Elena Santidrian ; Ciorpac, Mitica ; Gessner, Jörn ; Holostenco, Daniela ; Kleiner, Wibke ; Kohlmann, Klaus ; Lamatsch, Dunja K ; Prokopov, Dmitry ; Bestin, Anastasia ; Bonpunt, Emmanuel ; Debeuf, Bastien ; Haffray, Pierrick ; Morvezen, Romain ; Pierre, Patrice ; Suciu, Radu ; Dirks, Ron ; Wuertz, Sven ; Kloas, Werner ; Schartl, Manfred ; Stöck, Matthias
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-10
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The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization

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Transposable elements as genome regulators in normal and malignant haematopoiesis

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Robertsonian fusion triggers recombination suppression on sex chromosomes in Coleonyx geckos

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Conservation of Major Satellite DNAs in Snake Heterochromatin

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Complex Structure of Lasiopodomys mandarinus vinogradovi Sex Chromosomes, Sex Determination, and Intraspecific Autosomal Polymorphism

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Effects of Mutations in the Drosophila melanogaster Rif1 Gene on the Replication and Underreplication of Pericentromeric Heterochromatin in Salivary Gland Polytene Chromosomes

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The Cytogenetic Map of the Nile Crocodile (Crocodylus niloticus, Crocodylidae, Reptilia) with Fluorescence In Situ Localization of Major Repetitive DNAs

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Identification of Iguania Ancestral Syntenic Blocks and Putative Sex Chromosomes in the Veiled Chameleon (Chamaeleo calyptratus, Chamaeleonidae, Iguania)

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Maps of Constitutive-Heterochromatin Distribution for Four Martes Species (Mustelidae, Carnivora, Mammalia) Show the Formative Role of Macrosatellite Repeats in Interspecific Variation of Chromosome S...

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Sequencing of Supernumerary Chromosomes of Red Fox and Raccoon Dog Confirms a Non-Random Gene Acquisition by B Chromosomes

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A rare familial rearrangement of chromosomes 9 and 15 associated with intellectual disability: a clinical and molecular study

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Evolution of MicroRNA Biogenesis Genes in the Sterlet (Acipenser ruthenus) and Other Polyploid Vertebrates

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Chromosome-Level Genome Assemblies Expand Capabilities of Genomics for Conservation Biology

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Amplified Fragments of an Autosome-Borne Gene Constitute a Significant Component of the W Sex Chromosome of Eremias velox (Reptilia, Lacertidae)

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Maps of Constitutive-Heterochromatin Distribution for Four IMartes/I Species Show the Formative Role of Macrosatellite Repeats in Interspecific Variation of Chromosome Structure

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Chromosome Distribution of Highly Conserved Tandemly Arranged Repetitive DNAs in the Siberian Sturgeon (Acipenser baerii)

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Whole-chromosome fusions in the karyotype evolution of Sceloporus (Iguania, Reptilia) are more intense in sex chromosomes than autosomes

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Genomic Underground: Unraveling NUMTs in Mole Voles

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A 180 My-old female-specific genome region in sturgeon reveals the oldest known vertebrate sex determining system with undifferentiated sex chromosomes

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