Search the collection

17 results for Ramirez+Flores,+Ricardo+O.

Sort by:

Sort by

Limit results to:

20 per page

17 results for Ramirez+Flores,+Ricardo+O.

Export to excel

Export record to excel

File type to download

Beta version

Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 1
ArticlesPeer ReviewedFull Text
Spatial multi-omic map of human myocardial infarction
Author / Creator:Kuppe, Christoph ; Ramirez Flores, Ricardo O. ; Li, Zhijian ; Hayat, Sikander ; Levinson, Rebecca T. ; Liao, Xian ; Hannani, Monica T. ; Tanevski, Jovan ; Wünnemann, Florian ; Nagai, James S. ; Halder, Maurice ; Schumacher, David ; Menzel, Sylvia ; Schäfer, Gideon ; Hoeft, Konrad ; Cheng, Mingbo ; Ziegler, Susanne ; Zhang, Xiaoting ; Peisker, Fabian ; Kaesler, Nadine ; Saritas, Turgay ; Xu, Yaoxian ; Kassner, Astrid ; Gummert, Jan ; Morshuis, Michiel ; Amrute, Junedh ; Veltrop, Rogier J. A. ; Boor, Peter ; Klingel, Karin ; Van Laake, Linda W. ; Vink, Aryan ; Hoogenboezem, Remco M. ; Bindels, Eric M. J. ; Schurgers, Leon ; Sattler, Susanne ; Schapiro, Denis ; Schneider, Rebekka K. ; Lavine, Kory ; Milting, Hendrik ; Costa, Ivan G. ; Saez-Rodriguez, Julio ; Kramann, Rafael
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2022-08, Vol.608 (7924), p.766-777
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 2
ArticlesPeer ReviewedFull Text
Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
Author / Creator:Dimitrov, Daniel ; Türei, Dénes ; Garrido-Rodriguez, Martin ; Burmedi, Paul L. ; Nagai, James S. ; Boys, Charlotte ; Ramirez Flores, Ricardo O. ; Kim, Hyojin ; Szalai, Bence ; Costa, Ivan G. ; Valdeolivas, Alberto ; Dugourd, Aurélien ; Saez-Rodriguez, Julio
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-06, Vol.13 (1), p.3224-13, Article 3224
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 3
ArticlesPeer ReviewedFull Text
decoupleR: ensemble of computational methods to infer biological activities from omics data
Author / Creator:Badia-i-Mompel, Pau ; Vélez Santiago, Jesús ; Braunger, Jana ; Geiss, Celina ; Dimitrov, Daniel ; Müller-Dott, Sophia ; Taus, Petr ; Dugourd, Aurelien ; Holland, Christian H ; Ramirez Flores, Ricardo O ; Saez-Rodriguez, Julio
Publisher:England: Oxford University Press
Journal title:Bioinformatics advances, 2022, Vol.2 (1), p.vbac016
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 4
ArticlesPeer ReviewedFull Text
The spatial transcriptomic landscape of the healing mouse intestine following damage
Author / Creator:Parigi, Sara M. ; Larsson, Ludvig ; Das, Srustidhar ; Ramirez Flores, Ricardo O. ; Frede, Annika ; Tripathi, Kumar P. ; Diaz, Oscar E. ; Selin, Katja ; Morales, Rodrigo A. ; Luo, Xinxin ; Monasterio, Gustavo ; Engblom, Camilla ; Gagliani, Nicola ; Saez-Rodriguez, Julio ; Lundeberg, Joakim ; Villablanca, Eduardo J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-02, Vol.13 (1), p.828-16, Article 828
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 5
ArticlesPeer ReviewedFull Text
Gene regulatory network inference in the era of single-cell multi-omics
Author / Creator:Badia-i-Mompel, Pau ; Wessels, Lorna ; Müller-Dott, Sophia ; Trimbour, Rémi ; Ramirez Flores, Ricardo O ; Argelaguet, Ricard ; Saez-Rodriguez, Julio
Publisher:London: Nature Publishing Group
Journal title:Nature reviews. Genetics, 2023-11, Vol.24 (11), p.739-754
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 6
ArticlesPeer ReviewedFull Text
Transcriptomic Cross‐Species Analysis of Chronic Liver Disease Reveals Consistent Regulation Between Humans and Mice
Author / Creator:Holland, Christian H. ; Ramirez Flores, Ricardo O. ; Myllys, Maiju ; Hassan, Reham ; Edlund, Karolina ; Hofmann, Ute ; Marchan, Rosemarie ; Cadenas, Cristina ; Reinders, Jörg ; Hoehme, Stefan ; Seddek, Abdel‐latif ; Dooley, Steven ; Keitel, Verena ; Godoy, Patricio ; Begher‐Tibbe, Brigitte ; Trautwein, Christian ; Rupp, Christian ; Mueller, Sebastian ; Longerich, Thomas ; Hengstler, Jan G. ; Saez‐Rodriguez, Julio ; Ghallab, Ahmed
Publisher:United States: Wolters Kluwer Health Medical Research, Lippincott Williams & Wilkins
Journal title:Hepatology communications, 2022-01, Vol.6 (1), p.161-177
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 7
ArticlesFull Text
Spatial multi-omic map of human myocardial infarction
Author / Creator:Kuppe, Christoph ; Ramirez Flores, Ricardo O ; Li, Zhijian ; Hannani, Monica ; Tanevski, Jovan ; Halder, Maurice ; Cheng, Mingbo ; Ziegler, Susanne ; Zhang, Xiaoting ; Preisker, Fabian ; Kaesler, Nadine ; Xu, Yaoxian ; Hoogenboezem, Remco M ; Bindels, Eric Mj ; Schneider, Rebekka K ; Milting, Hendrik ; Costa, Ivan G ; Saez-Rodriguez, Julio ; Kramann, Rafael
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-12
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 8
ArticlesFull Text
A cross-study transcriptional patient map of heart failure defines conserved multicellular coordination in cardiac remodeling
Author / Creator:Lanzer, Jan D ; Ramirez Flores, Ricardo O ; Jose Linares Blanco ; Saez-Rodriguez, Julio
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2024-11
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 9
ArticlesFull Text
Comparison and evaluation of methods to infer gene regulatory networks from multimodal single-cell data
Author / Creator:Badia-I-Mompel, Pau ; Casals-Franch, Roger ; Wessels, Lorna ; Müller-Dott, Sophia ; Trimbour, Rémi ; Yang, Yunxiao ; Ricardo Omar Ramirez Flores ; Saez-Rodriguez, Julio
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2025-02
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 10
ArticlesFull Text
Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease
Author / Creator:Ramirez Flores, Ricardo O. ; Lanzer, Jan D. ; Dimitrov, Daniel ; Velten, Britta ; Saez-Rodriguez, Julio
Publisher:Cold Spring Harbor Laboratory
Journal title:bioRxiv, 2023-02
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 11
ArticlesFull Text
Single-cell transcriptomics reveal distinctive patterns of fibroblast activation in murine heart failure with preserved ejection fraction
Author / Creator:Lanzer, Jan D. ; Wienecke, Laura M. ; Ramirez-Flores, Ricardo O. ; Zylla, Maura M. ; Hartmann, Niklas ; Sicklinger, Florian ; Schultz, Jobst-Hendrick ; Frey, Norbert ; Saez-Rodriguez, Julio ; Leuschner, Florian
Publisher:Cold Spring Harbor Laboratory
Journal title:bioRxiv, 2023-05
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 12
ArticlesFull Text
Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities
Author / Creator:Müller-Dott, Sophia ; Tsirvouli, Eirini ; Vázquez, Miguel ; Ramirez Flores, Ricardo O. ; Badia-i-Mompel, Pau ; Fallegger, Robin ; Lægreid, Astrid ; Saez-Rodriguez, Julio
Publisher:Cold Spring Harbor Laboratory
Journal title:bioRxiv, 2023-04
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 13
ArticlesFull Text
Interpretable Inflammation Landscape of Circulating Immune cells
Author / Creator:Jiménez-Gracia, Laura ; Maspero, Davide ; Aguilar-Fernández, Sergio ; Craighero, Francesco ; Ruiz, Sara ; Marchese, Domenica ; Caratu, Ginevra ; Elosua-Bayes, Marc ; Abdalfatah, Mohamed ; Sanzo-Machuca, Angela ; Corraliza, Ana M ; Massoni-Badosa, Ramon ; Tran, Hoang A ; Rachelly Normand ; Nestor, Jacquelyn ; Hong, Yourae ; Kole, Tessa ; Van Der Velde, Petra ; Alleblas, Frederique ; Pedretti, Flaminia ; Aterido, Adria ; Banchero, Martin ; Soriano, German ; Roman, Eva ; Van Den Berge, Maarten ; Salas, Azucena ; Carrascosa, Jose Manuel ; Antonio Fernandez Nebro ; Domenech, Eugeni ; Cañete, Juan ; Tornero, Jesus ; Perez-Gisbert, Javier ; Choy, Ernest ; Girolomoni, Giampiero ; Siegmund, Britta ; Antonio, Julia ; Serra, Violeta ; Elosua, Roberto ; Tejpar, Sabine ; Vidal, Silvia ; Nawijn, Martijn C ; Marsal, Sara ; Vandergheynst, Pierre ; Villani, Alexandra-Chloe ; Nieto, Juan C ; Heyn, Holger
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2023-11
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 14
ArticlesFull Text
Comparison of Resources and Methods to infer Cell-Cell Communication from Single-cell RNA Data
Author / Creator:Dimitrov, Daniel ; Türei, Dénes ; Boys, Charlotte ; Nagai, James S. ; Ramirez Flores, Ricardo O. ; Kim, Hyojin ; Szalai, Bence ; Costa, Ivan G. ; Dugourd, Aurélien ; Valdeolivas, Alberto ; Saez-Rodriguez, Julio
Publisher:Cold Spring Harbor Laboratory
Journal title:bioRxiv, 2021-05
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 15
ArticlesFull Text
Spatial cell type mapping of multiple sclerosis lesions
Author / Creator:Lerma-Martin, Celia ; Badia-I-Mompel, Pau ; Ricardo Omar Ramirez Flores ; Sekol, Patricia ; Hofmann, Annika ; Thaewel, Thomas ; Riedl, Christian J ; Wuennemann, Florian ; Ibarra-Arellano, Miguel A ; Trobisch, Tim ; Eisele, Philipp ; Schapiro, Denis ; Haeussler, Maximilian ; Hametner, Simon ; Saez-Rodriguez, Julio ; Schirmer, Lucas
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-11
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 16
ArticlesFull Text
decoupleR: Ensemble of computational methods to infer biological activities from omics data
Author / Creator:Badia-i-Mompel, Pau ; Vélez, Jesús ; Braunger, Jana ; Geiss, Celina ; Dimitrov, Daniel ; Müller-Dott, Sophia ; Taus, Petr ; Dugourd, Aurelien ; Holland, Christian H. ; Ramirez Flores, Ricardo O. ; Saez-Rodriguez, Julio
Publisher:Cold Spring Harbor Laboratory
Journal title:bioRxiv, 2021-11
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 17
ArticlesFull Text
The spatial transcriptomic landscape of the healing intestine following damage
Author / Creator:Parigi, Sara M ; Larsson, Ludvig ; Das, Srustidhar ; Ricardo Omar Ramirez Flores ; Frede, Annika ; Tripathi, Kumar ; Diaz, Oscar ; Selin, Katja ; Morales, Rodrigo A ; Luo, Xinxin ; Monasterio, Gustavo ; Engblom, Camilla ; Gagliani, Nicola ; Saez, Julio ; Lundeberg, Joakim ; Villablanca, Eduardo J
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-07
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.

Export record to excel

Export this record

Export record to excel

Spatial multi-omic map of human myocardial infarction

Export this record

Export record to excel

Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data

Export this record

Export record to excel

decoupleR: ensemble of computational methods to infer biological activities from omics data

Export this record

Export record to excel

The spatial transcriptomic landscape of the healing mouse intestine following damage

Export this record

Export record to excel

Gene regulatory network inference in the era of single-cell multi-omics

Export this record

Export record to excel

Transcriptomic Cross‐Species Analysis of Chronic Liver Disease Reveals Consistent Regulation Between Humans and Mice

Export this record

Export record to excel

Spatial multi-omic map of human myocardial infarction

Export this record

Export record to excel

A cross-study transcriptional patient map of heart failure defines conserved multicellular coordination in cardiac remodeling

Export this record

Export record to excel

Comparison and evaluation of methods to infer gene regulatory networks from multimodal single-cell data

Export this record

Export record to excel

Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease

Export this record

Export record to excel

Single-cell transcriptomics reveal distinctive patterns of fibroblast activation in murine heart failure with preserved ejection fraction

Export this record

Export record to excel

Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities

Export this record

Export record to excel

Interpretable Inflammation Landscape of Circulating Immune cells

Export this record

Export record to excel

Comparison of Resources and Methods to infer Cell-Cell Communication from Single-cell RNA Data

Export this record

Export record to excel

Spatial cell type mapping of multiple sclerosis lesions

Export this record

Export record to excel

decoupleR: Ensemble of computational methods to infer biological activities from omics data

Export this record

Export record to excel

The spatial transcriptomic landscape of the healing intestine following damage

Refine your search