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ArticlesPeer ReviewedFull Text
The intestinal clock drives the microbiome to maintain gastrointestinal homeostasis
Author / Creator:Heddes, Marjolein ; Altaha, Baraa ; Niu, Yunhui ; Reitmeier, Sandra ; Kleigrewe, Karin ; Haller, Dirk ; Kiessling, Silke
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-10, Vol.13 (1), p.6068-17, Article 6068
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ArticlesPeer ReviewedFull Text
Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing
Author / Creator:Abellan-Schneyder, Isabel ; Matchado, Monica S. ; Reitmeier, Sandra ; Sommer, Alina ; Sewald, Zeno ; Baumbach, Jan ; List, Markus ; Neuhaus, Klaus
Publisher:United States: American Society for Microbiology
Journal title:mSphere, 2021-02, Vol.6 (1)
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ArticlesPeer ReviewedFull Text
Associations between habitual diet, metabolic disease, and the gut microbiota using latent Dirichlet allocation
Author / Creator:Breuninger, Taylor A. ; Wawro, Nina ; Breuninger, Jakob ; Reitmeier, Sandra ; Clavel, Thomas ; Six-Merker, Julia ; Pestoni, Giulia ; Rohrmann, Sabine ; Rathmann, Wolfgang ; Peters, Annette ; Grallert, Harald ; Meisinger, Christa ; Haller, Dirk ; Linseisen, Jakob
Publisher:England: BioMed Central
Journal title:Microbiome, 2021-03, Vol.9 (1), p.61-18, Article 61
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Fecal Bile Acids and Neutral Sterols Are Associated with Latent Microbial Subgroups in the Human Gut
Author / Creator:Breuninger, Taylor A. ; Wawro, Nina ; Freuer, Dennis ; Reitmeier, Sandra ; Artati, Anna ; Grallert, Harald ; Adamski, Jerzy ; Meisinger, Christa ; Peters, Annette ; Haller, Dirk ; Linseisen, Jakob
Publisher:Switzerland: MDPI AG
Journal title:Metabolites, 2022-09, Vol.12 (9), p.846
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Alteration of Intestinal Microbiome of Clostridioides difficile-Infected Hamsters during the Treatment with Specific Cow Antibodies
Author / Creator:Heidebrecht, Hans-Jürgen ; Lagkouvardos, Ilias ; Reitmeier, Sandra ; Hengst, Claudia ; Kulozik, Ulrich ; Pfaffl, Michael W.
Publisher:Basel: MDPI AG
Journal title:Antibiotics (Basel), 2021-06, Vol.10 (6), p.724
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Gut Microbial Disruption in Critically Ill Patients with COVID-19-Associated Pulmonary Aspergillosis
Author / Creator:Maurer, H. Carlo ; Schult, David ; Koyumdzhieva, Plamena ; Reitmeier, Sandra ; Middelhoff, Moritz ; Rasch, Sebastian ; List, Markus ; Janssen, Klaus-Peter ; Steiger, Katja ; Protzer, Ulrike ; Schmid, Roland M. ; Neuhaus, Klaus ; Haller, Dirk ; Quante, Michael ; Lahmer, Tobias
Publisher:Switzerland: MDPI AG
Journal title:Journal of fungi (Basel), 2022-11, Vol.8 (12), p.1265
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High-Fructose Diet Alters Intestinal Microbial Profile and Correlates with Early Tumorigenesis in a Mouse Model of Barrett’s Esophagus
Author / Creator:Proaño-Vasco, Andrea ; Baumeister, Theresa ; Metwaly, Amira ; Reitmeier, Sandra ; Kleigrewe, Karin ; Meng, Chen ; Gigl, Michael ; Engleitner, Thomas ; Öllinger, Rupert ; Rad, Roland ; Steiger, Katja ; Anand, Akanksha ; Strangmann, Julia ; Thimme, Robert ; Schmid, Roland M. ; Wang, Timothy C. ; Quante, Michael
Publisher:Switzerland: MDPI AG
Journal title:Microorganisms (Basel), 2021-11, Vol.9 (12), p.2432
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Microbiome risk profiles as biomarkers for inflammatory and metabolic disorders
Author / Creator:Metwaly, Amira ; Reitmeier, Sandra ; Haller, Dirk
Publisher:London: Nature Publishing Group
Journal title:Nature reviews. Gastroenterology & hepatology, 2022-06, Vol.19 (6), p.383-397
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Investigation of Adiposity Measures and Operational Taxonomic unit (OTU) Data Transformation Procedures in Stool Samples from a German Cohort Study Using Machine Learning Algorithms
Author / Creator:Troll, Martina ; Brandmaier, Stefan ; Reitmeier, Sandra ; Adam, Jonathan ; Sharma, Sapna ; Sommer, Alice ; Bind, Marie-Abèle ; Neuhaus, Klaus ; Clavel, Thomas ; Adamski, Jerzy ; Haller, Dirk ; Peters, Annette ; Grallert, Harald
Publisher:Switzerland: MDPI AG
Journal title:Microorganisms (Basel), 2020-04, Vol.8 (4), p.547
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Handling of spurious sequences affects the outcome of high-throughput 16S rRNA gene amplicon profiling
Author / Creator:Reitmeier, Sandra ; Hitch, Thomas C. A ; Treichel, Nicole ; Fikas, Nikolaos ; Hausmann, Bela ; Ramer-Tait, Amanda E ; Neuhaus, Klaus ; Berry, David ; Haller, Dirk ; Lagkouvardos, Ilias ; Clavel, Thomas
Publisher:London: Oxford University Press
Journal title:ISME Communications, 2021-06, Vol.1 (1)
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ArticlesPeer ReviewedFull Text
Systematic Evaluation of Clinical, Nutritional, and Fecal Microbial Factors for Their Association With Colorectal Polyps
Author / Creator:Schult, David ; Maurer, H. Carlo ; Frolova, Marina ; Ringelhan, Marc ; Mayr, Ulrich ; Ulrich, Jörg ; Heilmaier, Markus ; Rasch, Sebastian ; Lahmer, Tobias ; Reitmeier, Sandra ; Hennig, Chiara ; Gassner, Christina ; Thur, Niklas ; Will, Theresa ; Janssen, Klaus-Peter ; Steiger, Katja ; Jesinghaus, Moritz ; Neuhaus, Klaus ; Quante, Michael ; Haller, Dirk ; Abdelhafez, Mohamed ; Schmid, Roland M. ; Middelhoff, Moritz
Publisher:Philadelphia, PA: Wolters Kluwer
Journal title:Clinical and translational gastroenterology, 2024-02, Vol.15 (2), p.e00660
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ArticlesFull Text
The intestinal circadian clock drives microbial rhythmicity to maintain gastrointestinal homeostasis
Author / Creator:Heddes, Marjolein ; Altaha, Baraa ; Niu, Yunhui ; Reitmeier, Sandra ; Kleigrewe, Karin ; Haller, Dirk ; Kiessling, Silke
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-07
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Mitochondrial perturbation in the intestine causes microbiota-dependent injury and gene signatures discriminative of inflammatory disease
Author / Creator:Urbauer, Elisabeth ; Aguanno, Doriane ; Mindermann, Nora ; Omer, Hélène ; Metwaly, Amira ; Krammel, Tina ; Faro, Tim ; Remke, Marianne ; Reitmeier, Sandra ; Bärthel, Stefanie ; Kersting, Johannes ; Huang, Zihua ; Xian, Feng ; Schmidt, Manuela ; Saur, Dieter ; Huber, Samuel ; Stecher, Bärbel ; List, Markus ; Gómez-Varela, David ; Steiger, Katja ; Allez, Matthieu ; Rath, Eva ; Haller, Dirk
Publisher:Cold Spring Harbor Laboratory
Journal title:bioRxiv, 2024-06
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ArticlesFull Text
Namco: A microbiome explorer
Author / Creator:Dietrich, Alexander ; Matchado, Monica Steffi ; Zwiebel, Maximilian ; Ölke, Benjamin ; Lauber, Michael ; Lagkouvardos, Ilias ; Baumbach, Jan ; Haller, Dirk ; Brandl, Beate ; Skurk, Thomas ; Hauner, Hans ; Reitmeier, Sandra ; List, Markus
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-05
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ArticlesFull Text
Diurnal rhythmicity of fecal microbiota and metabolite profiles in the first year of life: a randomized controlled interventional trial with infant formula
Author / Creator:Heppner, Nina ; Reitmeier, Sandra ; Heddes, Marjolein ; Michael Vig Merino ; Schwartz, Leon ; Dietrich, Alexander ; List, Markus ; Gigl, Michael ; Chen, Meng ; Omer, Helene ; Kleigrewe, Karin ; Daan R Van Der Veen ; Schirmer, Melanie ; Kiessling, Silke ; Haller, Dirk
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2024-01
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Gut microbial disruption in critically ill patients with COVID-19 associated pulmonary aspergillosis
Author / Creator:Schult, David ; Maurer, Carlo ; Koyumdzhieva, Plamena ; Reitmeier, Sandra ; Middelhoff, Moritz ; Rasch, Sebastian ; List, Markus ; Janssen, Klaus-Peter ; Steiger, Katja ; Protzer, Ulrike ; Schmid, Roland M ; Neuhaus, Klaus ; Haller, Dirk ; Quante, Michael ; Lahmer, Tobias
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-10
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Gut Bacterial Dysbiosis and Instability is Associated with the Onset of Complications and Mortality in COVID-19
Author / Creator:Schult, David ; Reitmeier, Sandra ; Koyumdzhieva, Plamena ; Middelhof, Moritz ; Erber, Johanna ; Schneider, Jochen ; Krager, Juliane ; Frolova, Marina ; Horstmann, Julia ; Fricke, Lisa ; Steiger, Katja ; Jesinghaus, Moritz ; Janssen, Klaus-Peter ; Protzer, Ulrike ; Neuhaus, Klaus ; Schmid, Roland M ; Haller, Dirk ; Quante, Michael
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-10
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Arrhythmic gut microbiome signatures for risk profiling of Type-2 Diabetes
Author / Creator:Reitmeier, Sandra ; Kiessling, Silke ; Clavel, Thomas ; List, Markus ; Almeida, Eduardo L ; Ghosh, Tarini G ; Neuhaus, Klaus ; Troll, Martina ; Grallert, Harald ; Rathmann, Wolfgang ; Linkohr, Birgit ; Franke, Andre ; Le Roy, Caroline I ; Bell, Jordana ; Spector, Timothy ; Baumbach, Jan ; O'toole, Paul ; Peters, Annette ; Haller, Dirk
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2019-12
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The intestinal clock drives the microbiome to maintain gastrointestinal homeostasis

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Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing

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Associations between habitual diet, metabolic disease, and the gut microbiota using latent Dirichlet allocation

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Fecal Bile Acids and Neutral Sterols Are Associated with Latent Microbial Subgroups in the Human Gut

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Alteration of Intestinal Microbiome of Clostridioides difficile-Infected Hamsters during the Treatment with Specific Cow Antibodies

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Gut Microbial Disruption in Critically Ill Patients with COVID-19-Associated Pulmonary Aspergillosis

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High-Fructose Diet Alters Intestinal Microbial Profile and Correlates with Early Tumorigenesis in a Mouse Model of Barrett’s Esophagus

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Microbiome risk profiles as biomarkers for inflammatory and metabolic disorders

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Investigation of Adiposity Measures and Operational Taxonomic unit (OTU) Data Transformation Procedures in Stool Samples from a German Cohort Study Using Machine Learning Algorithms

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Handling of spurious sequences affects the outcome of high-throughput 16S rRNA gene amplicon profiling

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Systematic Evaluation of Clinical, Nutritional, and Fecal Microbial Factors for Their Association With Colorectal Polyps

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The intestinal circadian clock drives microbial rhythmicity to maintain gastrointestinal homeostasis

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Mitochondrial perturbation in the intestine causes microbiota-dependent injury and gene signatures discriminative of inflammatory disease

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Namco: A microbiome explorer

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Diurnal rhythmicity of fecal microbiota and metabolite profiles in the first year of life: a randomized controlled interventional trial with infant formula

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Gut microbial disruption in critically ill patients with COVID-19 associated pulmonary aspergillosis

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Gut Bacterial Dysbiosis and Instability is Associated with the Onset of Complications and Mortality in COVID-19

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Arrhythmic gut microbiome signatures for risk profiling of Type-2 Diabetes

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