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74 results for Rigden,+Daniel J.

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ArticlesPeer ReviewedFull Text
The industrial melanism mutation in British peppered moths is a transposable element
Author / Creator:Hof, Arjen E. van’t ; Campagne, Pascal ; Rigden, Daniel J. ; Yung, Carl J. ; Lingley, Jessica ; Quail, Michael A. ; Hall, Neil ; Darby, Alistair C. ; Saccheri, Ilik J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2016-06, Vol.534 (7605), p.102-105
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Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely occurring RNA modifications
Author / Creator:Song, Zitao ; Huang, Daiyun ; Song, Bowen ; Chen, Kunqi ; Song, Yiyou ; Liu, Gang ; Su, Jionglong ; Magalhães, João Pedro de ; Rigden, Daniel J. ; Meng, Jia
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-06, Vol.12 (1), p.4011-4011, Article 4011
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Evaluating Caveolin Interactions: Do Proteins Interact with the Caveolin Scaffolding Domain through a Widespread Aromatic Residue-Rich Motif?
Author / Creator:Byrne, Dominic P. ; Dart, Caroline ; Rigden, Daniel J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-09, Vol.7 (9), p.e44879-e44879
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The heparin-binding proteome in normal pancreas and murine experimental acute pancreatitis
Author / Creator:Nunes, Quentin M. ; Su, Dunhao ; Brownridge, Philip J. ; Simpson, Deborah M. ; Sun, Changye ; Li, Yong ; Bui, Thao P. ; Zhang, Xiaoying ; Huang, Wei ; Rigden, Daniel J. ; Beynon, Robert J. ; Sutton, Robert ; Fernig, David G.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-06, Vol.14 (6), p.e0217633
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Genome-wide transcriptional analyses in Anopheles mosquitoes reveal an unexpected association between salivary gland gene expression and insecticide resistance
Author / Creator:Isaacs, Alison T. ; Mawejje, Henry D. ; Tomlinson, Sean ; Rigden, Daniel J. ; Donnelly, Martin J.
Publisher:England: BioMed Central
Journal title:BMC genomics, 2018-03, Vol.19 (1), p.225-225, Article 225
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findMySequence : a neural-network-based approach for identification of unknown proteins in X-ray crystallography and cryo-EM
Author / Creator:Chojnowski, Grzegorz ; Simpkin, Adam J. ; Leonardo, Diego A. ; Seifert-Davila, Wolfram ; Vivas-Ruiz, Dan E. ; Keegan, Ronan M. ; Rigden, Daniel J.
Publisher:England: International Union of Crystallography
Journal title:IUCrJ, 2022-01, Vol.9 (1), p.86-97
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Metabolic and Target-Site Mechanisms Combine to Confer Strong DDT Resistance in Anopheles gambiae
Author / Creator:Mitchell, Sara N. ; Rigden, Daniel J. ; Dowd, Andrew J. ; Lu, Fang ; Wilding, Craig S. ; Weetman, David ; Dadzie, Samuel ; Jenkins, Adam M. ; Regna, Kimberly ; Boko, Pelagie ; Djogbenou, Luc ; Muskavitch, Marc A. T. ; Ranson, Hilary ; Paine, Mark J. I. ; Mayans, Olga ; Donnelly, Martin J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-03, Vol.9 (3), p.e92662
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Using deep-learning predictions reveals a large number of register errors in PDB depositions
Author / Creator:Sánchez Rodríguez, Filomeno ; Simpkin, Adam J. ; Chojnowski, Grzegorz ; Keegan, Ronan M. ; Rigden, Daniel J.
Publisher:England: International Union of Crystallography
Journal title:IUCrJ, 2024-11, Vol.11 (6), p.938-950
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Informatics investigations into anti-thyroid drug induced agranulocytosis associated with multiple HLA-B alleles
Author / Creator:Ramsbottom, Kerry A. ; Carr, Daniel F. ; Rigden, Daniel J. ; Jones, Andrew R.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2020-02, Vol.15 (2), p.e0220754-e0220754
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ATG24 Represses Autophagy and Differentiation and Is Essential for Homeostasy of the Flagellar Pocket in Trypanosoma brucei
Author / Creator:Brennand, Ana ; Rico, Eva ; Rigden, Daniel J. ; Van Der Smissen, Patrick ; Courtoy, Pierre J. ; Michels, Paul A. M.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-06, Vol.10 (6), p.e0130365-e0130365
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Applications of contact predictions to structural biology
Author / Creator:Simkovic, Felix ; Ovchinnikov, Sergey ; Baker, David ; Rigden, Daniel J.
Publisher:England: International Union of Crystallography
Journal title:IUCrJ, 2017-05, Vol.4 (3), p.291-300
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New Structural and Functional Contexts of the Dx[DN]xDG Linear Motif: Insights into Evolution of Calcium-Binding Proteins
Author / Creator:Rigden, Daniel J. ; Woodhead, Duncan D. ; Wong, Prudence W. H. ; Galperin, Michael Y.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-06, Vol.6 (6), p.e21507-e21507
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In silico prediction of structure and function for a large family of transmembrane proteins that includes human Tmem41b [version 1; peer review: 1 approved, 2 approved with reservations]
Author / Creator:Mesdaghi, Shahram ; Murphy, David L ; Sánchez Rodríguez, Filomeno ; Burgos-Mármol, J. Javier ; Rigden, Daniel J
Publisher:F1000 Research Ltd
Journal title:F1000 research, 2020, Vol.9, p.1395
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ArticlesPeer ReviewedFull Text
In silico prediction of structure and function for a large family of transmembrane proteins that includes human Tmem41b [version 2; peer review: 2 approved, 1 approved with reservations]
Author / Creator:Mesdaghi, Shahram ; Murphy, David L ; Sánchez Rodríguez, Filomeno ; Burgos-Mármol, J. Javier ; Rigden, Daniel J
Publisher:England: Faculty of 1000 Ltd
Journal title:F1000 research, 2020, Vol.9, p.1395-1395
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Evidence for Loss of a Partial Flagellar Glycolytic Pathway during Trypanosomatid Evolution
Author / Creator:Brown, Robert W. B. ; Collingridge, Peter W. ; Gull, Keith ; Rigden, Daniel J. ; Ginger, Michael L.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-07, Vol.9 (7), p.e103026
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Correction: Evaluating Caveolin Interactions: Do Proteins Interact with the Caveolin Scaffolding Domain through a Widespread Aromatic Residue-Rich Motif?
Author / Creator:Byrne, Dominic P. ; Dart, Caroline ; Rigden, Daniel J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-02, Vol.8 (2)
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Plant-like Traits Associated with Metabolism of Trypanosoma Parasites
Author / Creator:Hannaert, Véronique ; Saavedra, Emma ; Duffieux, Francis ; Szikora, Jean-Pierre ; Rigden, Daniel J. ; Paul A. M. Michels ; Opperdoes, Fred R.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2003-02, Vol.100 (3), p.1067-1071
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Ab Initio Modeling Led Annotation Suggests Nucleic Acid Binding Function for Many DUFs
Author / Creator:Rigden, Daniel J.
Publisher:United States: Mary Ann Liebert, Inc
Journal title:Omics (Larchmont, N.Y.), 2011-07, Vol.15 (7-8), p.431-438
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Characterisation of a Desmosterol Reductase Involved in Phytosterol Dealkylation in the Silkworm, Bombyx mori
Author / Creator:Ciufo, Leonora F. ; Murray, Patricia A. ; Thompson, Anu ; Rigden, Daniel J. ; Rees, Huw H.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-06, Vol.6 (6), p.e21316-e21316
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Weeds, worms, and more. Papain's long-lost cousin, phytochelatin synthase
Author / Creator:Rea, P.A ; Vatamaniuk, O.K ; Rigden, D.J
Publisher:United States: American Society of Plant Biologists
Journal title:Plant physiology (Bethesda), 2004-09, Vol.136 (1), p.2463-2474
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Showing 1 to 20 of 74 results

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The industrial melanism mutation in British peppered moths is a transposable element

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Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely occurring RNA modifications

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Evaluating Caveolin Interactions: Do Proteins Interact with the Caveolin Scaffolding Domain through a Widespread Aromatic Residue-Rich Motif?

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The heparin-binding proteome in normal pancreas and murine experimental acute pancreatitis

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Genome-wide transcriptional analyses in Anopheles mosquitoes reveal an unexpected association between salivary gland gene expression and insecticide resistance

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findMySequence : a neural-network-based approach for identification of unknown proteins in X-ray crystallography and cryo-EM

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Metabolic and Target-Site Mechanisms Combine to Confer Strong DDT Resistance in Anopheles gambiae

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Using deep-learning predictions reveals a large number of register errors in PDB depositions

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Informatics investigations into anti-thyroid drug induced agranulocytosis associated with multiple HLA-B alleles

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ATG24 Represses Autophagy and Differentiation and Is Essential for Homeostasy of the Flagellar Pocket in Trypanosoma brucei

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Applications of contact predictions to structural biology

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New Structural and Functional Contexts of the Dx[DN]xDG Linear Motif: Insights into Evolution of Calcium-Binding Proteins

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In silico prediction of structure and function for a large family of transmembrane proteins that includes human Tmem41b [version 1; peer review: 1 approved, 2 approved with reservations]

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In silico prediction of structure and function for a large family of transmembrane proteins that includes human Tmem41b [version 2; peer review: 2 approved, 1 approved with reservations]

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Evidence for Loss of a Partial Flagellar Glycolytic Pathway during Trypanosomatid Evolution

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Correction: Evaluating Caveolin Interactions: Do Proteins Interact with the Caveolin Scaffolding Domain through a Widespread Aromatic Residue-Rich Motif?

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Plant-like Traits Associated with Metabolism of Trypanosoma Parasites

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Ab Initio Modeling Led Annotation Suggests Nucleic Acid Binding Function for Many DUFs

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Characterisation of a Desmosterol Reductase Involved in Phytosterol Dealkylation in the Silkworm, Bombyx mori

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Weeds, worms, and more. Papain's long-lost cousin, phytochelatin synthase

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