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ArticlesPeer ReviewedFull Text
Age-specific mortality and immunity patterns of SARS-CoV-2
Author / Creator:O’Driscoll, Megan ; Ribeiro Dos Santos, Gabriel ; Wang, Lin ; Cummings, Derek A. T. ; Azman, Andrew S. ; Paireau, Juliette ; Fontanet, Arnaud ; Cauchemez, Simon ; Salje, Henrik
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2021-02, Vol.590 (7844), p.140-145
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Association between Zika virus and microcephaly in French Polynesia, 2013–15: a retrospective study
Author / Creator:Cauchemez, Simon, Dr ; Besnard, Marianne, MD ; Bompard, Priscillia, MPH ; Dub, Timothée, MPH ; Guillemette-Artur, Prisca, MD ; Eyrolle-Guignot, Dominique, MD ; Salje, Henrik, PhD ; Van Kerkhove, Maria D, PhD ; Abadie, Véronique, Prof ; Garel, Catherine, MD ; Fontanet, Arnaud, Prof ; Mallet, Henri-Pierre, MD
Publisher:England: Elsevier Ltd
Journal title:The Lancet (British edition), 2016-05, Vol.387 (10033), p.2125-2132
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A systematic review of antibody mediated immunity to coronaviruses: kinetics, correlates of protection, and association with severity
Author / Creator:Huang, Angkana T. ; Garcia-Carreras, Bernardo ; Hitchings, Matt D. T. ; Yang, Bingyi ; Katzelnick, Leah C. ; Rattigan, Susan M. ; Borgert, Brooke A. ; Moreno, Carlos A. ; Solomon, Benjamin D. ; Trimmer-Smith, Luke ; Etienne, Veronique ; Rodriguez-Barraquer, Isabel ; Lessler, Justin ; Salje, Henrik ; Burke, Donald S. ; Wesolowski, Amy ; Cummings, Derek A. T.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-09, Vol.11 (1), p.4704-4704, Article 4704
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Transmission of Nipah Virus — 14 Years of Investigations in Bangladesh
Author / Creator:Nikolay, Birgit ; Salje, Henrik ; Hossain, M. Jahangir ; Khan, A.K.M. Dawlat ; Sazzad, Hossain M.S ; Rahman, Mahmudur ; Daszak, Peter ; Ströher, Ute ; Pulliam, Juliet R.C ; Kilpatrick, A. Marm ; Nichol, Stuart T ; Klena, John D ; Sultana, Sharmin ; Afroj, Sayma ; Luby, Stephen P ; Cauchemez, Simon ; Gurley, Emily S
Publisher:United States: Massachusetts Medical Society
Journal title:The New England journal of medicine, 2019-05, Vol.380 (19), p.1804-1814
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Nationally-representative serostudy of dengue in Bangladesh allows generalizable disease burden estimates
Author / Creator:Salje, Henrik ; Paul, Kishor Kumar ; Paul, Repon ; Rodriguez-Barraquer, Isabel ; Rahman, Ziaur ; Alam, Mohammad Shafiul ; Rahman, Mahmadur ; Al-Amin, Hasan Mohammad ; Heffelfinger, James ; Gurley, Emily
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2019-04, Vol.8
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Assessing the global threat from Zika virus
Author / Creator:Lessler, Justin ; Chaisson, Lelia H. ; Kucirka, Lauren M. ; Bi, Qifang ; Grantz, Kyra ; Salje, Henrik ; Carcelen, Andrea C. ; Ott, Cassandra T. ; Sheffield, Jeanne S. ; Ferguson, Neil M. ; Cummings, Derek A. T. ; Metcalf, C. Jessica E. ; Rodriguez-Barraquer, Isabel
Publisher:United States: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2016-08, Vol.353 (6300), p.663-663
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Evaluating the impact of curfews and other measures on SARS-CoV-2 transmission in French Guiana
Author / Creator:Andronico, Alessio ; Tran Kiem, Cécile ; Paireau, Juliette ; Succo, Tiphanie ; Bosetti, Paolo ; Lefrancq, Noémie ; Nacher, Mathieu ; Djossou, Félix ; Sanna, Alice ; Flamand, Claude ; Salje, Henrik ; Rousseau, Cyril ; Cauchemez, Simon
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-03, Vol.12 (1), p.1634-1634, Article 1634
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Reconstruction of antibody dynamics and infection histories to evaluate dengue risk
Author / Creator:Salje, Henrik ; Cummings, Derek A. T. ; Rodriguez-Barraquer, Isabel ; Katzelnick, Leah C. ; Lessler, Justin ; Klungthong, Chonticha ; Thaisomboonsuk, Butsaya ; Nisalak, Ananda ; Weg, Alden ; Ellison, Damon ; Macareo, Louis ; Yoon, In-Kyu ; Jarman, Richard ; Thomas, Stephen ; Rothman, Alan L. ; Endy, Timothy ; Cauchemez, Simon
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2018-05, Vol.557 (7707), p.719-723
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Opportunities for improved surveillance and control of dengue from age-specific case data
Author / Creator:Rodriguez-Barraquer, Isabel ; Salje, Henrik ; Cummings, Derek A
Publisher:England: eLife Sciences Publications Ltd
Journal title:eLife, 2019-05, Vol.8
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Disparities in influenza mortality and transmission related to sociodemographic factors within Chicago in the pandemic of 1918
Author / Creator:Grantz, Kyra H. ; Rane, Madhura S. ; Salje, Henrik ; Glass, Gregory E. ; Schachterle, Stephen E. ; Cummings, Derek A. T.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2016-11, Vol.113 (48), p.13839-13844
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SARS-CoV-2 transmission across age groups in France and implications for control
Author / Creator:Tran Kiem, Cécile ; Bosetti, Paolo ; Paireau, Juliette ; Crépey, Pascal ; Salje, Henrik ; Lefrancq, Noémie ; Fontanet, Arnaud ; Benamouzig, Daniel ; Boëlle, Pierre-Yves ; Desenclos, Jean-Claude ; Opatowski, Lulla ; Cauchemez, Simon
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-11, Vol.12 (1), p.6895-6895, Article 6895
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Reconstructing Mayaro virus circulation in French Guiana shows frequent spillovers
Author / Creator:Hozé, Nathanaël ; Salje, Henrik ; Rousset, Dominique ; Fritzell, Camille ; Vanhomwegen, Jessica ; Bailly, Sarah ; Najm, Matthieu ; Enfissi, Antoine ; Manuguerra, Jean-Claude ; Flamand, Claude ; Cauchemez, Simon
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-06, Vol.11 (1), p.2842-2842, Article 2842
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How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study
Author / Creator:Salje, Henrik ; Lessler, Justin ; Paul, Kishor Kumar ; Azman, Andrew S. ; Rahman, M. Waliur ; Rahman, Mahmudur ; Cummings, Derek ; Gurley, Emily S. ; Cauchemez, Simon
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2016-11, Vol.113 (47), p.13420-13425
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Seroepidemiologic Study Designs for Determining SARS-COV-2 Transmission and Immunity
Author / Creator:Clapham, Hannah ; Hay, James ; Routledge, Isobel ; Takahashi, Saki ; Choisy, Marc ; Cummings, Derek ; Grenfell, Bryan ; Metcalf, C. Jessica E. ; Mina, Michael ; Barraquer, Isabel Rodriguez ; Salje, Henrik ; Tam, Clarence C.
Publisher:United States: U.S. National Center for Infectious Diseases
Journal title:Emerging infectious diseases, 2020-09, Vol.26 (9), p.1978-1986
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Evaluation of the extended efficacy of the Dengvaxia vaccine against symptomatic and subclinical dengue infection
Author / Creator:Salje, Henrik ; Alera, Maria Theresa ; Chua, Mary Noreen ; Hunsawong, Taweewun ; Ellison, Damon ; Srikiatkhachorn, Anon ; Jarman, Richard G. ; Gromowski, Gregory D. ; Rodriguez-Barraquer, Isabel ; Cauchemez, Simon ; Cummings, Derek A. T. ; Macareo, Louis ; Yoon, In-Kyu ; Fernandez, Stefan ; Rothman, Alan L.
Publisher:New York: Nature Publishing Group US
Journal title:Nature Medicine, 2021-08, Vol.27 (8), p.1395-1400
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Dengue diversity across spatial and temporal scales: Local structure and the effect of host population size
Author / Creator:Salje, Henrik ; Lessler, Justin ; Berry, Irina Maljkovic ; Melendrez, Melanie C. ; Endy, Timothy ; Kalayanarooj, Siripen ; A-Nuegoonpipat, Atchareeya ; Chanama, Sumalee ; Sangkijporn, Somchai ; Klungthong, Chonticha ; Thaisomboonsuk, Butsaya ; Nisalak, Ananda ; Gibbons, Robert V. ; Iamsirithaworn, Sopon ; Macareo, Louis R. ; Yoon, In-Kyu ; Sangarsang, Areerat ; Jarman, Richard G. ; Cummings, Derek A. T.
Publisher:United States: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2017-03, Vol.355 (6331), p.1302-1306
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Contact structure, mobility, environmental impact and behaviour: the importance of social forces to infectious disease dynamics and disease ecology
Author / Creator:Arthur, Ronan F. ; Gurley, Emily S. ; Salje, Henrik ; Bloomfield, Laura S. P. ; Jones, James H.
Publisher:England: The Royal Society
Journal title:Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2017-05, Vol.372 (1719), p.20160454-20160454
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Reconstructing unseen transmission events to infer dengue dynamics from viral sequences
Author / Creator:Salje, Henrik ; Wesolowski, Amy ; Brown, Tyler S. ; Kiang, Mathew V. ; Berry, Irina Maljkovic ; Lefrancq, Noemie ; Fernandez, Stefan ; Jarman, Richard G. ; Ruchusatsawat, Kriangsak ; Iamsirithaworn, Sopon ; Vandepitte, Warunee P. ; Suntarattiwong, Piyarat ; Read, Jonathan M. ; Klungthong, Chonticha ; Thaisomboonsuk, Butsaya ; Engø-Monsen, Kenth ; Buckee, Caroline ; Cauchemez, Simon ; Cummings, Derek A. T.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-03, Vol.12 (1), p.1810-1810, Article 1810
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RSero: A user-friendly R package to reconstruct pathogen circulation history from seroprevalence studies
Author / Creator:Hozé, Nathanaël ; Pons-Salort, Margarita ; Metcalf, C. Jessica E. ; White, Michael ; Salje, Henrik ; Cauchemez, Simon
Publisher:United States: Public Library of Science
Journal title:PLoS computational biology, 2025-02, Vol.21 (2), p.e1012777
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Convergence of Humans, Bats, Trees, and Culture in Nipah Virus Transmission, Bangladesh
Author / Creator:Gurley, Emily S. ; Hegde, Sonia T. ; Hossain, Kamal ; Sazzad, Hossain M.S. ; Hossain, M. Jahangir ; Rahman, Mahmudur ; Sharker, M.A. Yushuf ; Salje, Henrik ; Islam, M. Saiful ; Epstein, Jonathan H. ; Khan, Salah U. ; Kilpatrick, A. Marm ; Daszak, Peter ; Luby, Stephen P.
Publisher:United States: U.S. National Center for Infectious Diseases
Journal title:Emerging infectious diseases, 2017-09, Vol.23 (9), p.1446-1453
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Age-specific mortality and immunity patterns of SARS-CoV-2

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Association between Zika virus and microcephaly in French Polynesia, 2013–15: a retrospective study

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A systematic review of antibody mediated immunity to coronaviruses: kinetics, correlates of protection, and association with severity

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Transmission of Nipah Virus — 14 Years of Investigations in Bangladesh

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Nationally-representative serostudy of dengue in Bangladesh allows generalizable disease burden estimates

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Assessing the global threat from Zika virus

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Evaluating the impact of curfews and other measures on SARS-CoV-2 transmission in French Guiana

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Reconstruction of antibody dynamics and infection histories to evaluate dengue risk

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Opportunities for improved surveillance and control of dengue from age-specific case data

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Disparities in influenza mortality and transmission related to sociodemographic factors within Chicago in the pandemic of 1918

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SARS-CoV-2 transmission across age groups in France and implications for control

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Reconstructing Mayaro virus circulation in French Guiana shows frequent spillovers

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How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study

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Seroepidemiologic Study Designs for Determining SARS-COV-2 Transmission and Immunity

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Evaluation of the extended efficacy of the Dengvaxia vaccine against symptomatic and subclinical dengue infection

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Dengue diversity across spatial and temporal scales: Local structure and the effect of host population size

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Contact structure, mobility, environmental impact and behaviour: the importance of social forces to infectious disease dynamics and disease ecology

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Reconstructing unseen transmission events to infer dengue dynamics from viral sequences

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RSero: A user-friendly R package to reconstruct pathogen circulation history from seroprevalence studies

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Convergence of Humans, Bats, Trees, and Culture in Nipah Virus Transmission, Bangladesh

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