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Newsletter articlesFull Text
INTERNATIONAL PATENT: CLEAR LABS, INC. , AMINI, SASAN , KHAKSAR, RAMIN , TAYLOR, MICHAEL , BARSI, JULIUS CHRISTOPHER , NAMAZI, HOSSEIN , ALLRED, ADAM , ZHANG, SHAOKANG , GEHRMANN, HENRIK , RHODEN, KYL...
Publisher:Washington, D.C: HT Digital Streams Limited
Journal title:US Fed News Service, Including US State News, 2020
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ArticlesPeer ReviewedFull Text
DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities
Author / Creator:Lobo, Jorge ; Shokralla, Shadi ; Costa, Maria Helena ; Hajibabaei, Mehrdad ; Costa, Filipe Oliveira
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-11, Vol.7 (1), p.15618-13, Article 15618
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ArticlesPeer ReviewedFull Text
Large-Scale Monitoring of Plants through Environmental DNA Metabarcoding of Soil: Recovery, Resolution, and Annotation of Four DNA Markers
Author / Creator:Fahner, Nicole A. ; Shokralla, Shadi ; Baird, Donald J. ; Hajibabaei, Mehrdad
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-06, Vol.11 (6), p.e0157505-e0157505
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ArticlesPeer ReviewedFull Text
Altered intestinal microbiota–host mitochondria crosstalk in new onset Crohn’s disease
Author / Creator:Mottawea, Walid ; Chiang, Cheng-Kang ; Mühlbauer, Marcus ; Starr, Amanda E. ; Butcher, James ; Abujamel, Turki ; Deeke, Shelley A. ; Brandel, Annette ; Zhou, Hu ; Shokralla, Shadi ; Hajibabaei, Mehrdad ; Singleton, Ruth ; Benchimol, Eric I. ; Jobin, Christian ; Mack, David R. ; Figeys, Daniel ; Stintzi, Alain
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2016-11, Vol.7 (1), p.13419-13419, Article 13419
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ArticlesPeer ReviewedFull Text
Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform
Author / Creator:Shokralla, Shadi ; Porter, Teresita M. ; Gibson, Joel F. ; Dobosz, Rafal ; Janzen, Daniel H. ; Hallwachs, Winnie ; Golding, G. Brian ; Hajibabaei, Mehrdad
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2015-04, Vol.5 (1), p.9687-9687, Article 9687
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ArticlesPeer ReviewedFull Text
Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics
Author / Creator:Gibson, Joel ; Shokralla, Shadi ; Porter, Teresita M. ; King, Ian ; van Konynenburg, Steven ; Janzen, Daniel H. ; Hallwachs, Winnie ; Hajibabaei, Mehrdad
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2014-06, Vol.111 (22), p.8007-8012
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ArticlesPeer ReviewedFull Text
Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos
Author / Creator:Hajibabaei, Mehrdad ; Shokralla, Shadi ; Zhou, Xin ; Singer, Gregory A. C. ; Baird, Donald J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-04, Vol.6 (4), p.e17497
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ArticlesPeer ReviewedFull Text
Large-Scale Biomonitoring of Remote and Threatened Ecosystems via High-Throughput Sequencing
Author / Creator:Gibson, Joel F. ; Shokralla, Shadi ; Curry, Colin ; Baird, Donald J. ; Monk, Wendy A. ; King, Ian ; Hajibabaei, Mehrdad
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-10, Vol.10 (10), p.e0138432-e0138432
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ArticlesPeer ReviewedFull Text
Assessing biodiversity of a freshwater benthic macroinvertebrate community through non-destructive environmental barcoding of DNA from preservative ethanol
Author / Creator:Hajibabaei, Mehrdad ; Spall, Jennifer L ; Shokralla, Shadi ; van Konynenburg, Steven
Publisher:England: Springer-Verlag
Journal title:BMC ecology, 2012-12, Vol.12 (1), p.28-28
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ArticlesPeer ReviewedFull Text
Identifying North American freshwater invertebrates using DNA barcodes: are existing COI sequence libraries fit for purpose?
Author / Creator:Curry, Colin J. ; Gibson, Joel F. ; Shokralla, Shadi ; Hajibabaei, Mehrdad ; Baird, Donald J.
Publisher:Lawrence: Society for Freshwater Science (SFS)
Journal title:Freshwater science, 2018-03, Vol.37 (1), p.178-189
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ArticlesPeer ReviewedFull Text
DNA metabarcoding reveals metacommunity dynamics in a threatened boreal wetland wilderness
Author / Creator:Bush, Alex ; Monk, Wendy A. ; Compson, Zacchaeus G. ; Peters, Daniel L. ; Porter, Teresita M. ; Shokralla, Shadi ; Wright, Michael T. G. ; Hajibabaei, Mehrdad ; Baird, Donald J.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2020-04, Vol.117 (15), p.8539-8545
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ArticlesPeer ReviewedFull Text
Watered-down biodiversity? A comparison of metabarcoding results from DNA extracted from matched water and bulk tissue biomonitoring samples
Author / Creator:Hajibabaei, Mehrdad ; Porter, Teresita M. ; Robinson, Chloe V. ; Baird, Donald J. ; Shokralla, Shadi ; Wright, Michael T. G.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-12, Vol.14 (12), p.e0225409
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ArticlesPeer ReviewedFull Text
Fecal source tracking and eDNA profiling in an urban creek following an extreme rain event
Author / Creator:Staley, Zachery R. ; Chuong, Jun Dennis ; Hill, Stephen J. ; Grabuski, Josey ; Shokralla, Shadi ; Hajibabaei, Mehrdad ; Edge, Thomas A.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2018-09, Vol.8 (1), p.14390-12, Article 14390
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ArticlesPeer ReviewedFull Text
Antimicrobial activities of different solvent extracts from stem and seeds of Peganum Harmala L
Author / Creator:Arif, Muhammad ; Wang, Xiukang ; Kazi, Mohammad Sayyar Khan ; Ullah Khan, Shahid ; Saeed, Sumbul ; Khan, Amir Muhammad ; Khan, Rahmat Ali ; Afzal, Masood ; Nawaz, Ayesha Fazal ; Zia, Muhammad Amir ; O. Elansary, Hosam ; Shokralla, Shadi ; Alhalabi, Abdullah ; Gul, Alia ; Fiaz, Sajid
Publisher:United States: Public Library of Science
Journal title:PloS one, 2022-04, Vol.17 (4), p.e0265206-e0265206
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ArticlesPeer ReviewedFull Text
Seed Priming with Iron Oxide Nanoparticles Raises Biomass Production and Agronomic Profile of Water-Stressed Flax Plants
Author / Creator:Waqas Mazhar, Muhammad ; Ishtiaq, Muhammad ; Maqbool, Mehwish ; Akram, Raheel ; Shahid, Adnan ; Shokralla, Shadi ; Al-Ghobari, Hussein ; Alataway, Abed ; Dewidar, Ahmed Z. ; El-Sabrout, Ahmed M. ; Elansary, Hosam O.
Publisher:Basel: MDPI AG
Journal title:Agronomy (Basel), 2022-05, Vol.12 (5), p.982
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ArticlesPeer ReviewedFull Text
Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka
Author / Creator:Amoghavarsha, Chittaragi ; Pramesh, Devanna ; Sridhara, Shankarappa ; Patil, Balanagouda ; Shil, Sandip ; Naik, Ganesha R. ; Naik, Manjunath K. ; Shokralla, Shadi ; El-Sabrout, Ahmed M. ; Mahmoud, Eman A. ; Elansary, Hosam O. ; Nayak, Anusha ; Prasannakumar, Muthukapalli K.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-05, Vol.12 (1), p.7403-7403, Article 7403
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ArticlesPeer ReviewedFull Text
Immunoadjuvant and Humoral Immune Responses of Garlic (Allium sativum L.) Lectins upon Systemic and Mucosal Administration in BALB/c Mice
Author / Creator:Padiyappa, Shruthishree D. ; Avalappa, Hemavathi ; Somegowda, Madhusudana ; Sridhara, Shankarappa ; Venkatesh, Yeldur P. ; Prabhakar, Bettadatunga T. ; Pramod, Siddanakoppalu N. ; Almujaydil, Mona S. ; Shokralla, Shadi ; Abdelbacki, Ashraf M. M. ; Elansary, Hosam O. ; El-Sabrout, Ahmed M. ; Mahmoud, Eman A.
Publisher:Switzerland: MDPI AG
Journal title:Molecules (Basel, Switzerland), 2022-02, Vol.27 (4), p.1375
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ArticlesPeer ReviewedFull Text
Interspecific competition in bats and diet shifts in response to white‐nose syndrome
Author / Creator:Morningstar, Derek E. ; Robinson, Chloe V. ; Shokralla, Shadi ; Hajibabaei, Mehrdad
Publisher:Washington: John Wiley & Sons, Inc
Journal title:Ecosphere (Washington, D.C), 2019-11, Vol.10 (11), p.n/a
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ArticlesPeer ReviewedFull Text
Ribosomal DNA and Plastid Markers Used to Sample Fungal and Plant Communities from Wetland Soils Reveals Complementary Biotas
Author / Creator:Porter, Teresita M. ; Shokralla, Shadi ; Baird, Donald ; Golding, G. Brian ; Hajibabaei, Mehrdad
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016, Vol.11 (1), p.e0142759-e0142759
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ArticlesPeer ReviewedFull Text
Pyrosequencing for Mini-Barcoding of Fresh and Old Museum Specimens
Author / Creator:Shokralla, Shadi ; Zhou, Xin ; Janzen, Daniel H. ; Hallwachs, Winnie ; Landry, Jean-François ; Jacobus, Luke M. ; Hajibabaei, Mehrdad
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-07, Vol.6 (7), p.e21252-e21252
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INTERNATIONAL PATENT: CLEAR LABS, INC. , AMINI, SASAN , KHAKSAR, RAMIN , TAYLOR, MICHAEL , BARSI, JULIUS CHRISTOPHER , NAMAZI, HOSSEIN , ALLRED, ADAM , ZHANG, SHAOKANG , GEHRMANN, HENRIK , RHODEN, KYL...

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DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities

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Large-Scale Monitoring of Plants through Environmental DNA Metabarcoding of Soil: Recovery, Resolution, and Annotation of Four DNA Markers

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Altered intestinal microbiota–host mitochondria crosstalk in new onset Crohn’s disease

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Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform

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Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

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Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

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Large-Scale Biomonitoring of Remote and Threatened Ecosystems via High-Throughput Sequencing

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Assessing biodiversity of a freshwater benthic macroinvertebrate community through non-destructive environmental barcoding of DNA from preservative ethanol

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Identifying North American freshwater invertebrates using DNA barcodes: are existing COI sequence libraries fit for purpose?

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DNA metabarcoding reveals metacommunity dynamics in a threatened boreal wetland wilderness

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Watered-down biodiversity? A comparison of metabarcoding results from DNA extracted from matched water and bulk tissue biomonitoring samples

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Fecal source tracking and eDNA profiling in an urban creek following an extreme rain event

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Antimicrobial activities of different solvent extracts from stem and seeds of Peganum Harmala L

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Seed Priming with Iron Oxide Nanoparticles Raises Biomass Production and Agronomic Profile of Water-Stressed Flax Plants

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Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka

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Immunoadjuvant and Humoral Immune Responses of Garlic (Allium sativum L.) Lectins upon Systemic and Mucosal Administration in BALB/c Mice

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Interspecific competition in bats and diet shifts in response to white‐nose syndrome

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Ribosomal DNA and Plastid Markers Used to Sample Fungal and Plant Communities from Wetland Soils Reveals Complementary Biotas

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Pyrosequencing for Mini-Barcoding of Fresh and Old Museum Specimens

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