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ArticlesPeer ReviewedFull Text
Computational design of a self-assembling symmetrical β-propeller protein
Author / Creator:Voet, Arnout R. D. ; Noguchi, Hiroki ; Addy, Christine ; Simoncini, David ; Terada, Daiki ; Unzai, Satoru ; Park, Sam-Yong ; Zhang, Kam Y. J. ; Tame, Jeremy R. H.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2014-10, Vol.111 (42), p.15102-15107
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ArticlesPeer ReviewedFull Text
A Probabilistic Fragment-Based Protein Structure Prediction Algorithm
Author / Creator:Simoncini, David ; Berenger, Francois ; Shrestha, Rojan ; Zhang, Kam Y. J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-07, Vol.7 (7), p.e38799-e38799
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ArticlesPeer ReviewedFull Text
Computational design of symmetrical eight-bladed β-propeller proteins
Author / Creator:Noguchi, Hiroki ; Addy, Christine ; Simoncini, David ; Wouters, Staf ; Mylemans, Bram ; Van Meervelt, Luc ; Schiex, Thomas ; Zhang, Kam Y. J. ; Tame, Jeremy R. H. ; Voet, Arnout R. D.
Publisher:England: International Union of Crystallography
Journal title:IUCrJ, 2019-01, Vol.6 (1), p.46-55
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ArticlesPeer ReviewedFull Text
Efficient Sampling in Fragment-Based Protein Structure Prediction Using an Estimation of Distribution Algorithm
Author / Creator:Simoncini, David ; Zhang, Kam Y. J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-07, Vol.8 (7), p.e68954-e68954
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ArticlesPeer ReviewedFull Text
Correction: A Probabilistic Fragment-Based Protein Structure Prediction Algorithm
Author / Creator:Simoncini, David ; Berenger, Francois ; Shrestha, Rojan ; Zhang, Kam Y. J.
Publisher:San Francisco: Public Library of Science
Journal title:PloS one, 2012-10, Vol.7 (10)
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ArticlesPeer ReviewedFull Text
Fragger: a protein fragment picker for structural queries [version 2; peer review: 2 approved]
Author / Creator:Berenger, Francois ; Simoncini, David ; Voet, Arnout ; Shrestha, Rojan ; Zhang, Kam Y.J
Publisher:London, UK: F1000 Research Limited
Journal title:F1000 research, 2017-01, Vol.6, p.1722-1722
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ArticlesPeer ReviewedFull Text
Fragger: a protein fragment picker for structural queries [version 1; peer review: 2 approved]
Author / Creator:Berenger, Francois ; Simoncini, David ; Voet, Arnout ; Shrestha, Rojan ; Zhang, Kam Y.J
Publisher:England: Faculty of 1000 Ltd
Journal title:F1000 research, 2017, Vol.6, p.1722
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ArticlesPeer ReviewedFull Text
On Using CFD and Experimental Data to Train an Artificial Neural Network to Reconstruct ECVT Images: Application for Fluidized Bed Reactors
Author / Creator:Montilla, Carlos ; Ansart, Renaud ; Majji, Anass ; Nadir, Ranem ; Cid, Emmanuel ; Simoncini, David ; Negny, Stephane
Publisher:Basel: MDPI AG
Journal title:Processes, 2024-02, Vol.12 (2), p.386
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ArticlesFull Text
Seven amino acid types suffice to reconstruct the core fold of RNA polymerase
Author / Creator:Yagi, Sota ; Padhi, Aditya K ; Vucinic, Jelena ; Barbe, Sophie ; Schiex, Thomas ; Nakagawa, Reiko ; Simoncini, David ; Zhang, Kam Y J ; Tagami, Shunsuke
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-02
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ArticlesPeer ReviewedFull Text
Computational design of a self-assembling symmetrical [Beta]-propeller protein
Author / Creator:Voet, Arnout R D ; Noguchi, Hiroki ; Addy, Christine ; Simoncini, David ; Terada, Daiki ; Unzai, Satoru ; Park, Sam-Yong ; Zhang, Kam Y J ; Tame, Jeremy R H
Publisher:Washington: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2014-10, Vol.111 (42), p.15102
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ArticlesPeer ReviewedFull Text
Computational design of symmetrical eight-bladed [beta]-propeller proteins
Author / Creator:Noguchi, Hiroki ; Addy, Christine ; Simoncini, David ; Wouters, Staf ; Mylemans, Bram ; Meervelt, Luc Van ; Schiex, Thomas ; Zhang, Kam Y.J ; Tame, Jeremy R.H ; Voet, Arnout R.D
Publisher:International Union of Crystallography
Journal title:IUCrJ, 2019-01, Vol.6 (1), p.46
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ArticlesPeer ReviewedFull Text
Efficient Sampling in Fragment-Based Protein Structure Prediction Using an Estimation of Distribution Algorithm. e68954
Author / Creator:Simoncini, David ; Zhang, Kam YJ
Journal title:PloS one, 2013-07, Vol.8 (7)
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ArticlesFull Text
Centric selection: a way to tune the exploration/exploitation trade-off
Author / Creator:Simoncini, David ; Verel, Sébastien ; Collard, Philippe ; Clergue, Manuel
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2011-07
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ArticlesFull Text
Anisotropic selection in cellular genetic algorithms
Author / Creator:Simoncini, David ; Verel, Sébastien ; Collard, Philippe ; Clergue, Manuel
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2008-02
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ArticlesFull Text
On the Influence of Selection Operators on Performances in Cellular Genetic Algorithms
Author / Creator:Simoncini, David ; Collard, Philippe ; Verel, Sébastien ; Clergue, Manuel
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2008-04
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ArticlesFull Text
From Cells to Islands: An unified Model of Cellular Parallel Genetic Algorithms
Author / Creator:Simoncini, David ; Collard, Philippe ; Verel, Sébastien ; Clergue, Manuel
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2008-03
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Computational design of a self-assembling symmetrical β-propeller protein

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A Probabilistic Fragment-Based Protein Structure Prediction Algorithm

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Computational design of symmetrical eight-bladed β-propeller proteins

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Efficient Sampling in Fragment-Based Protein Structure Prediction Using an Estimation of Distribution Algorithm

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Correction: A Probabilistic Fragment-Based Protein Structure Prediction Algorithm

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Fragger: a protein fragment picker for structural queries [version 2; peer review: 2 approved]

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Fragger: a protein fragment picker for structural queries [version 1; peer review: 2 approved]

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On Using CFD and Experimental Data to Train an Artificial Neural Network to Reconstruct ECVT Images: Application for Fluidized Bed Reactors

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Seven amino acid types suffice to reconstruct the core fold of RNA polymerase

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Computational design of a self-assembling symmetrical [Beta]-propeller protein

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Computational design of symmetrical eight-bladed [beta]-propeller proteins

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Efficient Sampling in Fragment-Based Protein Structure Prediction Using an Estimation of Distribution Algorithm. e68954

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Centric selection: a way to tune the exploration/exploitation trade-off

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Anisotropic selection in cellular genetic algorithms

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On the Influence of Selection Operators on Performances in Cellular Genetic Algorithms

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From Cells to Islands: An unified Model of Cellular Parallel Genetic Algorithms

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