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104 results for Sivasubbu,+Sridhar

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ArticlesPeer ReviewedFull Text
Systematic Transcriptome Wide Analysis of lncRNA-miRNA Interactions
Author / Creator:Jalali, Saakshi ; Bhartiya, Deeksha ; Lalwani, Mukesh Kumar ; Sivasubbu, Sridhar ; Scaria, Vinod
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-02, Vol.8 (2), p.e53823
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RNA sequencing of db/db mice liver identifies lncRNA H19 as a key regulator of gluconeogenesis and hepatic glucose output
Author / Creator:Goyal, Neha ; Sivadas, Ambily ; Shamsudheen, K. V. ; Jayarajan, Rijith ; Verma, Ankit ; Sivasubbu, Sridhar ; Scaria, Vinod ; Datta, Malabika
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-08, Vol.7 (1), p.8312-12, Article 8312
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Mitochondrial calcium uptake orchestrates vertebrate pigmentation via transcriptional regulation of keratin filaments
Author / Creator:Tanwar, Jyoti ; Ahuja, Kriti ; Sharma, Akshay ; Sehgal, Paras ; Ranjan, Gyan ; Sultan, Farina ; Agrawal, Anushka ; D’Angelo, Donato ; Priya, Anshu ; Yenamandra, Vamsi K. ; Singh, Archana ; Raffaello, Anna ; Madesh, Muniswamy ; Rizzuto, Rosario ; Sivasubbu, Sridhar ; Motiani, Rajender K.
Publisher:United States: Public Library of Science
Journal title:PLoS biology, 2024-11, Vol.22 (11), p.e3002895
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Dynamic Expression of Long Non-Coding RNAs (lncRNAs) in Adult Zebrafish
Author / Creator:Kaushik, Kriti ; Leonard, Vincent Elvin ; KV, Shamsudheen ; Lalwani, Mukesh Kumar ; Jalali, Saakshi ; Patowary, Ashok ; Joshi, Adita ; Scaria, Vinod ; Sivasubbu, Sridhar
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-12, Vol.8 (12), p.e83616
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A genome-wide map of circular RNAs in adult zebrafish
Author / Creator:Sharma, Disha ; Sehgal, Paras ; Mathew, Samatha ; Vellarikkal, Shamsudheen Karuthedath ; Singh, Angom Ramcharan ; Kapoor, Shruti ; Jayarajan, Rijith ; Scaria, Vinod ; Sivasubbu, Sridhar
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-03, Vol.9 (1), p.3432-3432, Article 3432
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zflncRNApedia: A Comprehensive Online Resource for Zebrafish Long Non-Coding RNAs
Author / Creator:Dhiman, Heena ; Kapoor, Shruti ; Sivadas, Ambily ; Sivasubbu, Sridhar ; Scaria, Vinod
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-06, Vol.10 (6), p.e0129997-e0129997
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Large scale changes in the transcriptome of Eisenia fetida during regeneration
Author / Creator:Bhambri, Aksheev ; Dhaunta, Neeraj ; Patel, Surendra Singh ; Hardikar, Mitali ; Bhatt, Abhishek ; Srikakulam, Nagesh ; Shridhar, Shruti ; Vellarikkal, Shamsudheen ; Pandey, Rajesh ; Jayarajan, Rijith ; Verma, Ankit ; Kumar, Vikram ; Gautam, Pradeep ; Khanna, Yukti ; Khan, Jameel Ahmed ; Fromm, Bastian ; Peterson, Kevin J. ; Scaria, Vinod ; Sivasubbu, Sridhar ; Pillai, Beena
Publisher:United States: Public Library of Science
Journal title:PloS one, 2018-09, Vol.13 (9), p.e0204234-e0204234
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Whole-genome sequencing of 1029 Indian individuals reveals unique and rare structural variants
Author / Creator:Divakar, Mohit Kumar ; Jain, Abhinav ; Bhoyar, Rahul C. ; Senthivel, Vigneshwar ; Jolly, Bani ; Imran, Mohamed ; Sharma, Disha ; Bajaj, Anjali ; Gupta, Vishu ; Scaria, Vinod ; Sivasubbu, Sridhar
Publisher:England: Nature Publishing Group
Journal title:Journal of human genetics, 2023-06, Vol.68 (6), p.409-417
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Spectrum of clinical features and genetic variants in mevalonate kinase (MVK) gene of South Indian families suffering from Hyperimmunoglobulin D Syndrome
Author / Creator:Govindaraj, Geeta Madathil ; Jain, Abhinav ; Peethambaran, Geetha ; Bhoyar, Rahul C. ; Vellarikkal, Shamsudheen Karuthedath ; Ganapati, Arvind ; Sandhya, Pulukool ; Edavazhippurath, Athulya ; Dhanasooraj, Dhananjayan ; Puthenpurayil, Jayakrishnan Machinary ; Chakkiyar, Krishnan ; Mishra, Anushree ; Batra, Arushi ; Punnen, Anu ; Kumar, Sathish ; Sivasubbu, Sridhar ; Scaria, Vinod
Publisher:San Francisco: Public Library of Science
Journal title:PloS one, 2020-08, Vol.15 (8), p.e0237999-e0237999
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Human 45,X Fibroblast Transcriptome Reveals Distinct Differentially Expressed Genes Including Long Noncoding RNAs Potentially Associated with the Pathophysiology of Turner Syndrome
Author / Creator:Rajpathak, Shriram N. ; Vellarikkal, Shamsudheen Karuthedath ; Patowary, Ashok ; Scaria, Vinod ; Sivasubbu, Sridhar ; Deobagkar, Deepti D.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-06, Vol.9 (6), p.e100076-e100076
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ArticlesPeer ReviewedFull Text
Maternal vitamin B12 deficiency in rats alters DNA methylation in metabolically important genes in their offspring
Author / Creator:Tanwar, Vinay Singh ; Ghosh, Sourav ; Sati, Satish ; Ghose, Subhoshree ; Kaur, Lovejeet ; Kumar, Kalle Anand ; Shamsudheen, K. V. ; Patowary, Ashok ; Singh, Meghna ; Jyothi, V. ; Kommineni, Pujitha ; Sivasubbu, Sridhar ; Scaria, Vinod ; Raghunath, Manchala ; Mishra, Rakesh ; Chandak, Giriraj Ratan ; Sengupta, Shantanu
Publisher:New York: Springer US
Journal title:Molecular and cellular biochemistry, 2020-05, Vol.468 (1-2), p.83-96
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In vivo protein trapping produces a functional expression codex of the vertebrate proteome
Author / Creator:Clark, Karl J ; Balciunas, Darius ; Pogoda, Hans-Martin ; Ding, Yonghe ; Westcot, Stephanie E ; Bedell, Victoria M ; Greenwood, Tammy M ; Urban, Mark D ; Skuster, Kimberly J ; Petzold, Andrew M ; Ni, Jun ; Nielsen, Aubrey L ; Patowary, Ashok ; Scaria, Vinod ; Sivasubbu, Sridhar ; Xu, Xiaolei ; Hammerschmidt, Matthias ; Ekker, Stephen C
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2011-06, Vol.8 (6), p.506-512
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DALIA- a comprehensive resource of Disease Alleles in Arab population
Author / Creator:Vatsyayan, Aastha ; Sharma, Parul ; Gupta, Shrey ; Sandhu, Sumiti ; Venu, Seetha Lakshmi ; Sharma, Vandana ; Badaoui, Bouabid ; Azedine, Kaidi ; Youssef, Serti ; Rajab, Anna ; Fayez, Alaaeldin ; Madinur, Seema ; Ranawat, Anop ; Pandhare, Kavita ; Ramachandran, Srinivasan ; Sivasubbu, Sridhar ; Scaria, Vinod
Publisher:United States: Public Library of Science
Journal title:PloS one, 2021-01, Vol.16 (1), p.e0244567-e0244567
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Whole genome sequencing identifies novel structural variant in a large Indian family affected with X-linked agammaglobulinemia
Author / Creator:Jain, Abhinav ; Govindaraj, Geeta Madathil ; Edavazhippurath, Athulya ; Faisal, Nabeel ; Bhoyar, Rahul C. ; Gupta, Vishu ; Uppuluri, Ramya ; Manakkad, Shiny Padinjare ; Kashyap, Atul ; Kumar, Anoop ; Divakar, Mohit Kumar ; Imran, Mohamed ; Sawant, Sneha ; Dalvi, Aparna ; Chakyar, Krishnan ; Madkaikar, Manisha ; Raj, Revathi ; Sivasubbu, Sridhar ; Scaria, Vinod
Publisher:San Francisco: Public Library of Science
Journal title:PloS one, 2021-07, Vol.16 (7), p.e0254407-e0254407
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Aptamer-Assisted Detection of the Altered Expression of Estrogen Receptor Alpha in Human Breast Cancer
Author / Creator:Ahirwar, Rajesh ; Vellarikkal, Shamsudheen Karuthedath ; Sett, Arghya ; Sivasubbu, Sridhar ; Scaria, Vinod ; Bora, Utpal ; Borthakur, Bibhuti Bhusan ; Kataki, Amal Chandra ; Sharma, Jagannath Dev ; Nahar, Pradip
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-04, Vol.11 (4), p.e0153001-e0153001
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Pharmacogenomic landscape of Indian population using whole genomes
Author / Creator:Sahana, S. ; Bhoyar, Rahul C. ; Sivadas, Ambily ; Jain, Abhinav ; Imran, Mohamed ; Rophina, Mercy ; Senthivel, Vigneshwar ; Kumar Diwakar, Mohit ; Sharma, Disha ; Mishra, Anushree ; Sivasubbu, Sridhar ; Scaria, Vinod
Publisher:United States: John Wiley & Sons, Inc
Journal title:Clinical and translational science, 2022-04, Vol.15 (4), p.866-877
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High Resolution Methylome Map of Rat Indicates Role of Intragenic DNA Methylation in Identification of Coding Region
Author / Creator:Sati, Satish ; Tanwar, Vinay Singh ; Kumar, K. Anand ; Patowary, Ashok ; Jain, Vaibhav ; Ghosh, Sourav ; Ahmad, Shadab ; Singh, Meghna ; Reddy, S. Umakar ; Chandak, Giriraj Ratan ; Raghunath, Manchala ; Sivasubbu, Sridhar ; Chakraborty, Kausik ; Scaria, Vinod ; Sengupta, Shantanu
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-02, Vol.7 (2), p.e31621-e31621
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Screening Currency Notes for Microbial Pathogens and Antibiotic Resistance Genes Using a Shotgun Metagenomic Approach
Author / Creator:Jalali, Saakshi ; Kohli, Samantha ; Latka, Chitra ; Bhatia, Sugandha ; Vellarikal, Shamsudheen Karuthedath ; Sivasubbu, Sridhar ; Scaria, Vinod ; Ramachandran, Srinivasan
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-06, Vol.10 (6), p.e0128711-e0128711
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Chamber Specific Gene Expression Landscape of the Zebrafish Heart
Author / Creator:Singh, Angom Ramcharan ; Sivadas, Ambily ; Sabharwal, Ankit ; Vellarikal, Shamsudheen Karuthedath ; Jayarajan, Rijith ; Verma, Ankit ; Kapoor, Shruti ; Joshi, Adita ; Scaria, Vinod ; Sivasubbu, Sridhar
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-01, Vol.11 (1), p.e0147823-e0147823
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Harnessing a High Cargo-Capacity Transposon for Genetic Applications in Vertebrates
Author / Creator:Balciunas, Darius ; Wangensteen, Kirk J. ; Wilber, Andrew ; Bell, Jason ; Geurts, Aron ; Sivasubbu, Sridhar ; Wang, Xin ; Hackett, Perry B. ; Largaespada, David A. ; McIvor, R. Scott ; Ekker, Stephen C.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2006-11, Vol.2 (11), p.e169
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Systematic Transcriptome Wide Analysis of lncRNA-miRNA Interactions

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RNA sequencing of db/db mice liver identifies lncRNA H19 as a key regulator of gluconeogenesis and hepatic glucose output

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Mitochondrial calcium uptake orchestrates vertebrate pigmentation via transcriptional regulation of keratin filaments

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Dynamic Expression of Long Non-Coding RNAs (lncRNAs) in Adult Zebrafish

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A genome-wide map of circular RNAs in adult zebrafish

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zflncRNApedia: A Comprehensive Online Resource for Zebrafish Long Non-Coding RNAs

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Large scale changes in the transcriptome of Eisenia fetida during regeneration

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Whole-genome sequencing of 1029 Indian individuals reveals unique and rare structural variants

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Spectrum of clinical features and genetic variants in mevalonate kinase (MVK) gene of South Indian families suffering from Hyperimmunoglobulin D Syndrome

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Human 45,X Fibroblast Transcriptome Reveals Distinct Differentially Expressed Genes Including Long Noncoding RNAs Potentially Associated with the Pathophysiology of Turner Syndrome

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Maternal vitamin B12 deficiency in rats alters DNA methylation in metabolically important genes in their offspring

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In vivo protein trapping produces a functional expression codex of the vertebrate proteome

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DALIA- a comprehensive resource of Disease Alleles in Arab population

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Whole genome sequencing identifies novel structural variant in a large Indian family affected with X-linked agammaglobulinemia

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Aptamer-Assisted Detection of the Altered Expression of Estrogen Receptor Alpha in Human Breast Cancer

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Pharmacogenomic landscape of Indian population using whole genomes

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High Resolution Methylome Map of Rat Indicates Role of Intragenic DNA Methylation in Identification of Coding Region

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Screening Currency Notes for Microbial Pathogens and Antibiotic Resistance Genes Using a Shotgun Metagenomic Approach

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Chamber Specific Gene Expression Landscape of the Zebrafish Heart

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Harnessing a High Cargo-Capacity Transposon for Genetic Applications in Vertebrates

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