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Multi-omics of 34 colorectal cancer cell lines - a resource for biomedical studies
Author / Creator:Berg, Kaja C. G. ; Eide, Peter W. ; Eilertsen, Ina A. ; Johannessen, Bjarne ; Bruun, Jarle ; Danielsen, Stine A. ; Bjørnslett, Merete ; Meza-Zepeda, Leonardo A. ; Eknæs, Mette ; Lind, Guro E. ; Myklebost, Ola ; Skotheim, Rolf I. ; Sveen, Anita ; Lothe, Ragnhild A.
Publisher:England: BioMed Central Ltd
Journal title:Molecular cancer, 2017-07, Vol.16 (1), p.116-16, Article 116
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PtdIns(3)P controls cytokinesis through KIF13A-mediated recruitment of FYVE-CENT to the midbody
Author / Creator:Sagona, Antonia P. ; Nezis, Ioannis P. ; Pedersen, Nina Marie ; Liestøl, Knut ; Poulton, John ; Rusten, Tor Erik ; Skotheim, Rolf I. ; Raiborg, Camilla ; Stenmark, Harald
Publisher:London: Nature Publishing Group UK
Journal title:Nature cell biology, 2010-04, Vol.12 (4), p.362-371
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GREM1 is associated with metastasis and predicts poor prognosis in ER-negative breast cancer patients
Author / Creator:Neckmann, Ulrike ; Wolowczyk, Camilla ; Hall, Martina ; Almaas, Eivind ; Ren, Jiang ; Zhao, Sen ; Johannessen, Bjarne ; Skotheim, Rolf I. ; Bjørkøy, Geir ; ten Dijke, Peter ; Holien, Toril
Publisher:England: BioMed Central Ltd
Journal title:Cell communication and signaling, 2019-11, Vol.17 (1), p.140-17, Article 140
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Multilevel genomics of colorectal cancers with microsatellite instability—clinical impact of JAK1 mutations and consensus molecular subtype 1
Author / Creator:Sveen, Anita ; Johannessen, Bjarne ; Tengs, Torstein ; Danielsen, Stine A. ; Eilertsen, Ina A. ; Lind, Guro E. ; Berg, Kaja C. G. ; Leithe, Edward ; Meza-Zepeda, Leonardo A. ; Domingo, Enric ; Myklebost, Ola ; Kerr, David ; Tomlinson, Ian ; Nesbakken, Arild ; Skotheim, Rolf I. ; Lothe, Ragnhild A.
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2017-05, Vol.9 (1), p.46-16, Article 46
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Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues
Author / Creator:Kilpinen, Sami ; Autio, Reija ; Ojala, Kalle ; Iljin, Kristiina ; Bucher, Elmar ; Sara, Henri ; Pisto, Tommi ; Saarela, Matti ; Skotheim, Rolf I ; Björkman, Mari ; Mpindi, John-Patrick ; Haapa-Paananen, Saija ; Vainio, Paula ; Edgren, Henrik ; Wolf, Maija ; Astola, Jaakko ; Nees, Matthias ; Hautaniemi, Sampsa ; Kallioniemi, Olli
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology (Online Edition), 2008-09, Vol.9 (9), p.R139, Article R139
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Whole-Transcriptome Sequencing Identifies Novel IRF2BP2-CDX1 Fusion Gene Brought about by Translocation t(1;5)(q42;q32) in Mesenchymal Chondrosarcoma
Author / Creator:Nyquist, Kaja B. ; Panagopoulos, Ioannis ; Thorsen, Jim ; Haugom, Lisbeth ; Gorunova, Ludmila ; Bjerkehagen, Bodil ; Fosså, Alexander ; Guriby, Marianne ; Nome, Torfinn ; Lothe, Ragnhild A. ; Skotheim, Rolf I. ; Heim, Sverre ; Micci, Francesca
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-11, Vol.7 (11), p.e49705
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In situ expression of ERG protein in the context of tumor heterogeneity identifies prostate cancer patients with inferior prognosis
Author / Creator:Kidd, Susanne G. ; Bogaard, Mari ; Carm, Kristina T. ; Bakken, Anne Cathrine ; Maltau, Aase M. V. ; Løvf, Marthe ; Lothe, Ragnhild A. ; Axcrona, Karol ; Axcrona, Ulrika ; Skotheim, Rolf I.
Publisher:United States: John Wiley & Sons, Inc
Journal title:Molecular oncology, 2022-08, Vol.16 (15), p.2810-2822
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Identification of an epigenetic biomarker panel with high sensitivity and specificity for colorectal cancer and adenomas
Author / Creator:Lind, Guro E ; Danielsen, Stine A ; Ahlquist, Terje ; Merok, Marianne A ; Andresen, Kim ; Skotheim, Rolf I ; Hektoen, Merete ; Rognum, Torleiv O ; Meling, Gunn I ; Hoff, Geir ; Bretthauer, Michael ; Thiis-Evensen, Espen ; Nesbakken, Arild ; Lothe, Ragnhild A
Publisher:England: BioMed Central Ltd
Journal title:Molecular cancer, 2011-07, Vol.10 (1), p.85-85, Article 85
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CRABP1, C1QL1 and LCN2 are biomarkers of differentiated thyroid carcinoma, and predict extrathyroidal extension
Author / Creator:Celestino, Ricardo ; Nome, Torfinn ; Pestana, Ana ; Hoff, Andreas M. ; Gonçalves, A. Pedro ; Pereira, Luísa ; Cavadas, Bruno ; Eloy, Catarina ; Bjøro, Trine ; Sobrinho-Simões, Manuel ; Skotheim, Rolf I. ; Soares, Paula
Publisher:England: BioMed Central Ltd
Journal title:BMC cancer, 2018-01, Vol.18 (1), p.68-16, Article 68
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Phospholipase C Isozymes Are Deregulated in Colorectal Cancer – Insights Gained from Gene Set Enrichment Analysis of the Transcriptome
Author / Creator:Danielsen, Stine A. ; Cekaite, Lina ; Ågesen, Trude H. ; Sveen, Anita ; Nesbakken, Arild ; Thiis-Evensen, Espen ; Skotheim, Rolf I. ; Lind, Guro E. ; Lothe, Ragnhild A.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-09, Vol.6 (9), p.e24419
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Gene methylation profiles of normal mucosa, and benign and malignant colorectal tumors identify early onset markers
Author / Creator:Ahlquist, Terje ; Lind, Guro E ; Costa, Vera L ; Meling, Gunn I ; Vatn, Morten ; Hoff, Geir S ; Rognum, Torleiv O ; Skotheim, Rolf I ; Thiis-Evensen, Espen ; Lothe, Ragnhild A
Publisher:England: BioMed Central Ltd
Journal title:Molecular cancer, 2008-12, Vol.7 (1), p.94-94, Article 94
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The expressed mutational landscape of microsatellite stable colorectal cancers
Author / Creator:Sveen, Anita ; Johannessen, Bjarne ; Eilertsen, Ina A. ; Røsok, Bård I. ; Gulla, Marie ; Eide, Peter W. ; Bruun, Jarle ; Kryeziu, Kushtrim ; Meza-Zepeda, Leonardo A. ; Myklebost, Ola ; Bjørnbeth, Bjørn A. ; Skotheim, Rolf I. ; Nesbakken, Arild ; Lothe, Ragnhild A.
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2021-09, Vol.13 (1), p.142-18, Article 142
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High Frequency of Fusion Transcripts Involving TCF7L2 in Colorectal Cancer: Novel Fusion Partner and Splice Variants
Author / Creator:Nome, Torfinn ; Hoff, Andreas M. ; Bakken, Anne Cathrine ; Rognum, Torleiv O. ; Nesbakken, Arild ; Skotheim, Rolf I.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-03, Vol.9 (3), p.e91264
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Transcriptional and functional consequences of TP53 splice mutations in colorectal cancer
Author / Creator:Smeby Jørgen ; Sveen, Anita ; Eilertsen, Ina A ; Danielsen, Stine A ; Hoff, Andreas M ; Eide, Peter W ; Johannessen Bjarne ; Hektoen Merete ; Skotheim, Rolf I ; Guren, Marianne G ; Nesbakken Arild ; Lothe, Ragnhild A
Publisher:New York: Nature Publishing Group
Journal title:Oncogenesis (New York, NY), 2019-05, Vol.8 (6)
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Transcriptome instability as a molecular pan-cancer characteristic of carcinomas
Author / Creator:Sveen, Anita ; Johannessen, Bjarne ; Teixeira, Manuel R ; Lothe, Ragnhild A ; Skotheim, Rolf I
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2014-08, Vol.15 (1), p.672-672, Article 672
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Distinct high resolution genome profiles of early onset and late onset colorectal cancer integrated with gene expression data identify candidate susceptibility loci
Author / Creator:Berg, Marianne ; Ågesen, Trude H ; Thiis-Evensen, Espen ; Merok, Marianne A ; Teixeira, Manuel R ; Vatn, Morten H ; Nesbakken, Arild ; Skotheim, Rolf I ; Lothe, Ragnhild A
Publisher:England: BioMed Central Ltd
Journal title:Molecular cancer, 2010-05, Vol.9 (1), p.100-100, Article 100
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Cysteine-Rich Secretory Protein-3 (CRISP3) Is Strongly Up-Regulated in Prostate Carcinomas with the TMPRSS2-ERG Fusion Gene
Author / Creator:Ribeiro, Franclim R. ; Paulo, Paula ; Costa, Vera L. ; Barros-Silva, João D. ; Ramalho-Carvalho, João ; Jerónimo, Carmen ; Henrique, Rui ; Lind, Guro E. ; Skotheim, Rolf I. ; Lothe, Ragnhild A. ; Teixeira, Manuel R.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-07, Vol.6 (7), p.e22317
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A Tumor-Associated Mutation of FYVE-CENT Prevents Its Interaction with Beclin 1 and Interferes with Cytokinesis
Author / Creator:Sagona, Antonia P. ; Nezis, Ioannis P. ; Bache, Kristi G. ; Haglund, Kaisa ; Bakken, Anne Cathrine ; Skotheim, Rolf I. ; Stenmark, Harald
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-03, Vol.6 (3), p.e17086
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Potential Downstream Target Genes of Aberrant ETS Transcription Factors Are Differentially Affected in Ewing’s Sarcoma and Prostate Carcinoma
Author / Creator:Camões, Maria J. ; Paulo, Paula ; Ribeiro, Franclim R. ; Barros-Silva, João D. ; Almeida, Mafalda ; Costa, Vera L. ; Cerveira, Nuno ; Skotheim, Rolf I. ; Lothe, Ragnhild A. ; Henrique, Rui ; Jerónimo, Carmen ; Teixeira, Manuel R.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-11, Vol.7 (11), p.e49819
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TIN: An R Package for Transcriptome Instability Analysis
Author / Creator:Johannessen, Bjarne ; Sveen, Anita ; Skotheim, Rolf I.
Publisher:London, England: SAGE Publishing
Journal title:Cancer informatics, 2015-01, Vol.2015 (14), p.CIN.S31363-112
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Showing 1 to 20 of 45 results

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Multi-omics of 34 colorectal cancer cell lines - a resource for biomedical studies

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PtdIns(3)P controls cytokinesis through KIF13A-mediated recruitment of FYVE-CENT to the midbody

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GREM1 is associated with metastasis and predicts poor prognosis in ER-negative breast cancer patients

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Multilevel genomics of colorectal cancers with microsatellite instability—clinical impact of JAK1 mutations and consensus molecular subtype 1

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Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues

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Whole-Transcriptome Sequencing Identifies Novel IRF2BP2-CDX1 Fusion Gene Brought about by Translocation t(1;5)(q42;q32) in Mesenchymal Chondrosarcoma

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In situ expression of ERG protein in the context of tumor heterogeneity identifies prostate cancer patients with inferior prognosis

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Identification of an epigenetic biomarker panel with high sensitivity and specificity for colorectal cancer and adenomas

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CRABP1, C1QL1 and LCN2 are biomarkers of differentiated thyroid carcinoma, and predict extrathyroidal extension

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Phospholipase C Isozymes Are Deregulated in Colorectal Cancer – Insights Gained from Gene Set Enrichment Analysis of the Transcriptome

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Gene methylation profiles of normal mucosa, and benign and malignant colorectal tumors identify early onset markers

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The expressed mutational landscape of microsatellite stable colorectal cancers

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High Frequency of Fusion Transcripts Involving TCF7L2 in Colorectal Cancer: Novel Fusion Partner and Splice Variants

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Transcriptional and functional consequences of TP53 splice mutations in colorectal cancer

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Transcriptome instability as a molecular pan-cancer characteristic of carcinomas

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Distinct high resolution genome profiles of early onset and late onset colorectal cancer integrated with gene expression data identify candidate susceptibility loci

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Cysteine-Rich Secretory Protein-3 (CRISP3) Is Strongly Up-Regulated in Prostate Carcinomas with the TMPRSS2-ERG Fusion Gene

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A Tumor-Associated Mutation of FYVE-CENT Prevents Its Interaction with Beclin 1 and Interferes with Cytokinesis

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Potential Downstream Target Genes of Aberrant ETS Transcription Factors Are Differentially Affected in Ewing’s Sarcoma and Prostate Carcinoma

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TIN: An R Package for Transcriptome Instability Analysis

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