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Bile salt hydrolase catalyses formation of amine-conjugated bile acids
Author / Creator:Rimal, Bipin ; Collins, Stephanie L. ; Tanes, Ceylan E. ; Rocha, Edson R. ; Granda, Megan A. ; Solanki, Sumeet ; Hoque, Nushrat J. ; Gentry, Emily C. ; Koo, Imhoi ; Reilly, Erin R. ; Hao, Fuhua ; Paudel, Devendra ; Singh, Vishal ; Yan, Tingting ; Kim, Min Soo ; Bittinger, Kyle ; Zackular, Joseph P. ; Krausz, Kristopher W. ; Desai, Dhimant ; Amin, Shantu ; Coleman, James P. ; Shah, Yatrik M. ; Bisanz, Jordan E. ; Gonzalez, Frank J. ; Vanden Heuvel, John P. ; Wu, Gary D. ; Zemel, Babette S. ; Dorrestein, Pieter C. ; Weinert, Emily E. ; Patterson, Andrew D.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2024-02, Vol.626 (8000), p.859-863
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THE MODULATORY EFFECT OF PREBIOTIC INULIN-TYPE FRUCTANS ON THE MICROBIOME PROFILE OF CHILDREN WITH INFLAMMATORY BOWEL DISEASE: A DOUBLE-BLIND RANDOMIZED CONTROLLED TRIAL
Author / Creator:Breton, Jessica ; Tanes, Ceylan ; Kyle, Bittinger ; Kachelries, Kelly ; Crisci, Melissa ; Compher, Charlene ; Baldassano, Robert ; Albenberg, Lindsey
Publisher:US: Oxford University Press
Journal title:Inflammatory bowel diseases, 2024-02, Vol.30 (Supplement_1), p.S10-S10
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Optimizing methods and dodging pitfalls in microbiome research
Author / Creator:Kim, Dorothy ; Hofstaedter, Casey E. ; Zhao, Chunyu ; Mattei, Lisa ; Tanes, Ceylan ; Clarke, Erik ; Lauder, Abigail ; Sherrill-Mix, Scott ; Chehoud, Christel ; Kelsen, Judith ; Conrad, Máire ; Collman, Ronald G. ; Baldassano, Robert ; Bushman, Frederic D. ; Bittinger, Kyle
Publisher:England: BioMed Central
Journal title:Microbiome, 2017-05, Vol.5 (1), p.52-14, Article 52
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Endothelial TLR4 and the microbiome drive cerebral cavernous malformations
Author / Creator:Tang, Alan T. ; Choi, Jaesung P. ; Kotzin, Jonathan J. ; Yang, Yiqing ; Hong, Courtney C. ; Hobson, Nicholas ; Girard, Romuald ; Zeineddine, Hussein A. ; Lightle, Rhonda ; Moore, Thomas ; Cao, Ying ; Shenkar, Robert ; Chen, Mei ; Mericko, Patricia ; Yang, Jisheng ; Li, Li ; Tanes, Ceylan ; Kobuley, Dmytro ; Võsa, Urmo ; Whitehead, Kevin J. ; Li, Dean Y. ; Franke, Lude ; Hart, Blaine ; Schwaninger, Markus ; Henao-Mejia, Jorge ; Morrison, Leslie ; Kim, Helen ; Awad, Issam A. ; Zheng, Xiangjian ; Kahn, Mark L.
Publisher:London: Nature Publishing Group UK
Journal title:Nature (London), 2017-05, Vol.545 (7654), p.305-310
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Permissive microbiome characterizes human subjects with a neurovascular disease cavernous angioma
Author / Creator:Polster, Sean P. ; Sharma, Anukriti ; Tanes, Ceylan ; Tang, Alan T. ; Mericko, Patricia ; Cao, Ying ; Carrión-Penagos, Julián ; Girard, Romuald ; Koskimäki, Janne ; Zhang, Dongdong ; Stadnik, Agnieszka ; Romanos, Sharbel G. ; Lyne, Seán B. ; Shenkar, Robert ; Yan, Kimberly ; Lee, Cornelia ; Akers, Amy ; Morrison, Leslie ; Robinson, Myranda ; Zafar, Atif ; Bittinger, Kyle ; Kim, Helen ; Gilbert, Jack A. ; Kahn, Mark L. ; Shen, Le ; Awad, Issam A.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-05, Vol.11 (1), p.2659-2659, Article 2659
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Establishing a mucosal gut microbial community in vitro using an artificial simulator
Author / Creator:Liu, LinShu ; Firrman, Jenni ; Tanes, Ceylan ; Bittinger, Kyle ; Thomas-Gahring, Audrey ; Wu, Gary D. ; Van den Abbeele, Pieter ; Tomasula, Peggy M.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2018-07, Vol.13 (7), p.e0197692-e0197692
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Unassigning bacterial species for microbiome studies
Author / Creator:Tanes, Ceylan ; Tu, Vincent ; Daniel, Scott ; Bittinger, Kyle
Publisher:United States: American Society for Microbiology
Journal title:mSystems, 2024-07, Vol.9 (7), p.e0051524
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Lifestyle and the presence of helminths is associated with gut microbiome composition in Cameroonians
Author / Creator:Rubel, Meagan A. ; Abbas, Arwa ; Taylor, Louis J. ; Connell, Andrew ; Tanes, Ceylan ; Bittinger, Kyle ; Ndze, Valantine N. ; Fonsah, Julius Y. ; Ngwang, Eric ; Essiane, André ; Fokunang, Charles ; Njamnshi, Alfred K. ; Bushman, Frederic D. ; Tishkoff, Sarah A.
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2020-05, Vol.21 (1), p.122-122, Article 122
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Sialylation and fucosylation modulate inflammasome-activating eIF2 Signaling and microbial translocation during HIV infection
Author / Creator:Giron, Leila B. ; Tanes, Ceylan E. ; Schleimann, Mariane H. ; Engen, Phillip A. ; Mattei, Lisa M. ; Anzurez, Alitzel ; Damra, Mohammad ; Zhang, Huanjia ; Bittinger, Kyle ; Bushman, Frederic ; Kossenkov, Andrew ; Denton, Paul W. ; Tateno, Hiroaki ; Keshavarzian, Ali ; Landay, Alan L. ; Abdel-Mohsen, Mohamed
Publisher:New York: Nature Publishing Group US
Journal title:Mucosal immunology, 2020-09, Vol.13 (5), p.753-766
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The impact of environmental pH on the gut microbiota community structure and short chain fatty acid production
Author / Creator:Firrman, Jenni ; Liu, LinShu ; Mahalak, Karley ; Tanes, Ceylan ; Bittinger, Kyle ; Tu, Vincent ; Bobokalonov, Jamshed ; Mattei, Lisa ; Zhang, Huanjia ; Van den Abbeele, Pieter
Publisher:England: Oxford University Press
Journal title:FEMS microbiology ecology, 2022-05, Vol.98 (5), p.1
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DIETARY INFLAMMATORY POTENTIAL AND FOOD PATTERNS IN RELATION TO GUT MICROBIOME AMONG CHILDREN WITH CROHN’S DISEASE: A COMPARATIVE STUDY WITH HEALTHY CONTROLS
Author / Creator:Breton, Jessica ; Tu, Vincent ; Tanes, Ceylan ; Quinn, Ryan ; Conrad, Maire ; Kachelries, Kelly ; Bittinger, Kyle ; Baldassano, Robert ; Compher, Charlene ; Albenberg, Lindsey
Publisher:US: Oxford University Press
Journal title:Inflammatory bowel diseases, 2021-01, Vol.27 (Supplement_1), p.S39-S40
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Distinct intestinal microbial signatures linked to accelerated systemic and intestinal biological aging
Author / Creator:Singh, Shalini ; Giron, Leila B. ; Shaikh, Maliha W. ; Shankaran, Shivanjali ; Engen, Phillip A. ; Bogin, Zlata R. ; Bambi, Simona A. ; Goldman, Aaron R. ; Azevedo, Joao L. L. C. ; Orgaz, Lorena ; de Pedro, Nuria ; González, Patricia ; Giera, Martin ; Verhoeven, Aswin ; Sánchez-López, Elena ; Pandrea, Ivona ; Kannan, Toshitha ; Tanes, Ceylan E. ; Bittinger, Kyle ; Landay, Alan L. ; Corley, Michael J. ; Keshavarzian, Ali ; Abdel-Mohsen, Mohamed
Publisher:England: BioMed Central Ltd
Journal title:Microbiome, 2024-02, Vol.12 (1), p.31-23, Article 31
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Persistence of the Probiotic Lacticaseibacillus rhamnosus Strain GG (LGG) in an In Vitro Model of the Gut Microbiome
Author / Creator:Mahalak, Karley K. ; Firrman, Jenni ; Bobokalonov, Jamshed ; Narrowe, Adrienne B. ; Bittinger, Kyle ; Daniel, Scott ; Tanes, Ceylan ; Mattei, Lisa M. ; Zeng, Wei-Bin ; Soares, Jason W. ; Kobori, Masuko ; Lemons, Johanna M. S. ; Tomasula, Peggy M. ; Liu, LinShu
Publisher:Basel: MDPI AG
Journal title:International journal of molecular sciences, 2022-10, Vol.23 (21), p.12973
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A quantitative approach to measure and predict microbiome response to antibiotics
Author / Creator:Tu, Vincent ; Ren, Yue ; Tanes, Ceylan ; Mukhopadhyay, Sagori ; Daniel, Scott G. ; Li, Hongzhe ; Bittinger, Kyle
Publisher:United States: American Society for Microbiology
Journal title:mSphere, 2024-09, Vol.9 (9), p.e0048824
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Gut Microbiome Changes Associated with Epithelial Barrier Damage and Systemic Inflammation during Antiretroviral Therapy of Chronic SIV Infection
Author / Creator:Tanes, Ceylan ; Walker, Edith M. ; Slisarenko, Nadia ; Gerrets, Giovanni L. ; Grasperge, Brooke F. ; Qin, Xuebin ; Jazwinski, S. Michal ; Bushman, Frederic D. ; Bittinger, Kyle ; Rout, Namita
Publisher:Switzerland: MDPI AG
Journal title:Viruses, 2021-08, Vol.13 (8), p.1567
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Antibiotic exposure is associated with minimal gut microbiome perturbations in healthy term infants
Author / Creator:Benitez, Alain J. ; Tanes, Ceylan ; Friedman, Elliot S. ; Zackular, Joseph P. ; Ford, Eileen ; Gerber, Jeffrey S. ; DeRusso, Patricia A. ; Kelly, Andrea ; Li, Hongzhe ; Elovitz, Michal A. ; Wu, Gary D. ; Zemel, Babette ; Bittinger, Kyle
Publisher:England: BioMed Central Ltd
Journal title:Microbiome, 2025-01, Vol.13 (1), p.21-11, Article 21
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Lacticaseibacillus rhamnosus Strain GG (LGG) Regulate Gut Microbial Metabolites, an In Vitro Study Using Three Mature Human Gut Microbial Cultures in a Simulator of Human Intestinal Microbial Ecosyste...
Author / Creator:Liu, LinShu ; Narrowe, Adrienne B. ; Firrman, Jenni A. ; Mahalak, Karley K. ; Bobokalonov, Jamshed T. ; Lemons, Johanna M. S. ; Bittinger, Kyle ; Daniel, Scott ; Tanes, Ceylan ; Mattei, Lisa ; Friedman, Elliot S. ; Soares, Jason W. ; Kobori, Masuko ; Zeng, Wei-Bin ; Tomasula, Peggy M.
Publisher:Switzerland: MDPI AG
Journal title:Foods, 2023-05, Vol.12 (11), p.2105-2105
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4444 The effect of early life antibiotics on gut microbiome and fecal bile acid concentrations in children
Author / Creator:Benitez, Alain Jesus ; Gerber, Jeffrey S. ; Tanes, Ceylan ; Bittinger, Kyle ; Friedman, Elliot S. ; Li, Hongzhe ; Bushman, Frederic D. ; Wu, Gary D. ; Zemel, Babette S.
Publisher:Cambridge: Cambridge University Press
Journal title:Journal of clinical and translational science, 2020-06, Vol.4 (s1), p.146-147
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Dietary carbohydrates regulate intestinal colonization and dissemination of Klebsiella pneumoniae
Author / Creator:Hecht, Aaron L. ; Harling, Lisa C. ; Friedman, Elliot S. ; Tanes, Ceylan ; Lee, Junhee ; Firrman, Jenni ; Hao, Fuhua ; Tu, Vincent ; Liu, LinShu ; Patterson, Andrew D. ; Bittinger, Kyle ; Goulian, Mark ; Wu, Gary D.
Publisher:United States: American Society for Clinical Investigation
Journal title:The Journal of clinical investigation, 2024-05, Vol.134 (9), p.1-13
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Protective major histocompatibility complex allele prevents type 1 diabetes by shaping the intestinal microbiota early in ontogeny
Author / Creator:Silverman, Michael ; Kua, Lindsay ; Tanca, Alessandro ; Pala, Mauro ; Palomba, Antonio ; Tanes, Ceylan ; Bittinger, Kyle ; Uzzau, Sergio ; Benoist, Christophe ; Mathis, Diane
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2017-09, Vol.114 (36), p.9671-9676
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Bile salt hydrolase catalyses formation of amine-conjugated bile acids

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THE MODULATORY EFFECT OF PREBIOTIC INULIN-TYPE FRUCTANS ON THE MICROBIOME PROFILE OF CHILDREN WITH INFLAMMATORY BOWEL DISEASE: A DOUBLE-BLIND RANDOMIZED CONTROLLED TRIAL

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Optimizing methods and dodging pitfalls in microbiome research

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Endothelial TLR4 and the microbiome drive cerebral cavernous malformations

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Permissive microbiome characterizes human subjects with a neurovascular disease cavernous angioma

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Establishing a mucosal gut microbial community in vitro using an artificial simulator

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Unassigning bacterial species for microbiome studies

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Lifestyle and the presence of helminths is associated with gut microbiome composition in Cameroonians

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Sialylation and fucosylation modulate inflammasome-activating eIF2 Signaling and microbial translocation during HIV infection

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The impact of environmental pH on the gut microbiota community structure and short chain fatty acid production

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DIETARY INFLAMMATORY POTENTIAL AND FOOD PATTERNS IN RELATION TO GUT MICROBIOME AMONG CHILDREN WITH CROHN’S DISEASE: A COMPARATIVE STUDY WITH HEALTHY CONTROLS

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Distinct intestinal microbial signatures linked to accelerated systemic and intestinal biological aging

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Persistence of the Probiotic Lacticaseibacillus rhamnosus Strain GG (LGG) in an In Vitro Model of the Gut Microbiome

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A quantitative approach to measure and predict microbiome response to antibiotics

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Gut Microbiome Changes Associated with Epithelial Barrier Damage and Systemic Inflammation during Antiretroviral Therapy of Chronic SIV Infection

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Antibiotic exposure is associated with minimal gut microbiome perturbations in healthy term infants

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Lacticaseibacillus rhamnosus Strain GG (LGG) Regulate Gut Microbial Metabolites, an In Vitro Study Using Three Mature Human Gut Microbial Cultures in a Simulator of Human Intestinal Microbial Ecosyste...

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4444 The effect of early life antibiotics on gut microbiome and fecal bile acid concentrations in children

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Dietary carbohydrates regulate intestinal colonization and dissemination of Klebsiella pneumoniae

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Protective major histocompatibility complex allele prevents type 1 diabetes by shaping the intestinal microbiota early in ontogeny

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