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ArticlesPeer ReviewedFull Text
Targeted amplicon sequencing + next-generation sequencing–based bulked segregant analysis identified genetic loci associated with preharvest sprouting tolerance in common buckwheat (Fagopyrum esculent...
Author / Creator:Takeshima, Ryoma ; Ogiso-Tanaka, Eri ; Yasui, Yasuo ; Matsui, Katsuhiro
Publisher:England: BioMed Central Ltd
Journal title:BMC plant biology, 2021-01, Vol.21 (1), p.18-18, Article 18
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DUDE-Seq: Fast, flexible, and robust denoising for targeted amplicon sequencing
Author / Creator:Lee, Byunghan ; Moon, Taesup ; Yoon, Sungroh ; Weissman, Tsachy
Publisher:United States: Public Library of Science
Journal title:PloS one, 2017-07, Vol.12 (7), p.e0181463-e0181463
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A SMRT approach for targeted amplicon sequencing of museum specimens (Lepidoptera)—patterns of nucleotide misincorporation
Author / Creator:D’Ercole, Jacopo ; Prosser, Sean W.J. ; Hebert, Paul D.N.
Publisher:United States: PeerJ, Inc
Journal title:PeerJ (San Francisco, CA), 2021-01, Vol.9, p.e10420-e10420, Article e10420
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Combined bacterial and fungal targeted amplicon sequencing of respiratory samples: Does the DNA extraction method matter?
Author / Creator:Angebault, Cécile ; Payen, Mathilde ; Woerther, Paul-Louis ; Rodriguez, Christophe ; Botterel, Françoise
Publisher:United States: Public Library of Science
Journal title:PloS one, 2020-04, Vol.15 (4), p.e0232215-e0232215
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Optimisation and Benchmarking of Targeted Amplicon Sequencing for Mycobiome Analysis of Respiratory Specimens
Author / Creator:Ali, Nur A’tikah Binte Mohamed ; Mac Aogáin, Micheál ; Morales, Raika Francesca ; Tiew, Pei Yee ; Chotirmall, Sanjay H.
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2019-10, Vol.20 (20), p.4991
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Genomic insights into the pathogenesis of Epstein–Barr virus-associated diffuse large B-cell lymphoma by whole-genome and targeted amplicon sequencing
Author / Creator:Gebauer, Niklas ; Künstner, Axel ; Ketzer, Julius ; Witte, Hanno M. ; Rausch, Tobias ; Benes, Vladimir ; Zimmermann, Jürgen ; Gebauer, Judith ; Merz, Hartmut ; Bernard, Veronica ; Harder, Lana ; Ratjen, Katharina ; Gesk, Stefan ; Peter, Wolfgang ; Busch, Yannik ; Trojok, Peter ; von Bubnoff, Nikolas ; Biersack, Harald ; Busch, Hauke ; Feller, Alfred C.
Publisher:London: Nature Publishing Group UK
Journal title:Blood cancer journal (New York), 2021-05, Vol.11 (5), p.102-102, Article 102
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High throughput human genotyping for variants associated with malarial disease outcomes using custom targeted amplicon sequencing
Author / Creator:Osborne, Ashley ; Phelan, Jody E. ; Vanheer, Leen N. ; Manjurano, Alphaxard ; Gitaka, Jesse ; Drakeley, Christopher J. ; Kaneko, Akira ; Kita, Kiyoshi ; Campino, Susana ; Clark, Taane G.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2023-07, Vol.13 (1), p.12062-12062, Article 12062
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Handling of targeted amplicon sequencing data focusing on index hopping and demultiplexing using a nested metabarcoding approach in ecology
Author / Creator:Guenay-Greunke, Yasemin ; Bohan, David A. ; Traugott, Michael ; Wallinger, Corinna
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-09, Vol.11 (1), p.19510-19510, Article 19510
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Application of a targeted amplicon sequencing panel to screen for insecticide resistance mutations in Anopheles darlingi populations from Brazil
Author / Creator:Acford-Palmer, Holly ; Andrade, Alice O. ; Phelan, Jody E. ; Santana, Rosa A. ; Lopes, Stefanie C. P. ; Medeiros, Jansen F. ; Clark, Taane G. ; Araujo, Maisa S. ; Campino, Susana
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2025-01, Vol.15 (1), p.731-11, Article 731
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Enhanced specificity of Bacillus metataxonomics using a tuf -targeted amplicon sequencing approach
Author / Creator:Xu, Xinming ; Nielsen, Lasse Johan Dyrbye ; Song, Lijie ; Maróti, Gergely ; Strube, Mikael Lenz ; Kovács, Ákos T
Publisher:London: Oxford University Press
Journal title:ISME Communications, 2023-11, Vol.3 (1), p.126-126
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Clinical impact of targeted amplicon sequencing for meningioma as a practical clinical-sequencing system
Author / Creator:Yuzawa, Sayaka ; Nishihara, Hiroshi ; Yamaguchi, Shigeru ; Mohri, Hiromi ; Wang, Lei ; Kimura, Taichi ; Tsuda, Masumi ; Tanino, Mishie ; Kobayashi, Hiroyuki ; Terasaka, Shunsuke ; Houkin, Kiyohiro ; Sato, Norihiro ; Tanaka, Shinya
Publisher:New York: Nature Publishing Group US
Journal title:Modern pathology, 2016-07, Vol.29 (7), p.708-716
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Detection of insecticide resistance markers in Anopheles funestus from the Democratic Republic of the Congo using a targeted amplicon sequencing panel
Author / Creator:Acford-Palmer, Holly ; Campos, Monica ; Bandibabone, Janvier ; N’Do, Sévérin ; Bantuzeko, Chimanuka ; Zawadi, Bertin ; Walker, Thomas ; Phelan, Jody E. ; Messenger, Louisa A. ; Clark, Taane G. ; Campino, Susana
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2023-10, Vol.13 (1), p.17363-17363, Article 17363
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A next generation targeted amplicon sequencing method to screen for insecticide resistance mutations in Aedes aegypti populations reveals a rdl mutation in mosquitoes from Cabo Verde
Author / Creator:Collins, Emma L. ; Phelan, Jody E. ; Hubner, Magdalena ; Spadar, Anton ; Campos, Monica ; Ward, Daniel ; Acford-Palmer, Holly ; Gomes, Ana Rita ; Silva, Keily ; Ferrero Gomez, Lara ; Clark, Taane G. ; Campino, Susana
Publisher:United States: Public Library of Science
Journal title:PLoS neglected tropical diseases, 2022-12, Vol.16 (12), p.e0010935
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Genetic variants and copy number changes in soft tissue leiomyosarcoma detected by targeted amplicon sequencing
Author / Creator:Rao, Uma ; Schoedel, Karen Elizabeth ; Petrosko, Patricia ; Sakai, Nozomi ; LaFramboise, William
Publisher:England: BMJ Publishing Group Ltd and Association of Clinical Pathologists
Journal title:Journal of clinical pathology, 2019-12, Vol.72 (12), p.810-816
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ArticlesPeer ReviewedFull Text
Combined bacterial and fungal targeted amplicon sequencing of respiratory samples: Does the DNA extraction method matter?
Author / Creator:Angebault, Cécile ; Payen, Mathilde ; Woerther, Paul-Louis ; Rodriguez, Christophe ; Botterel, Françoise
Publisher:Public Library of Science
Journal title:PloS one, 2020-04, Vol.15 (4)
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Genomic surveillance of Anopheles mosquitoes on the Bijagós Archipelago using custom targeted amplicon sequencing identifies mutations associated with insecticide resistance
Author / Creator:Moss, Sophie ; Pretorius, Elizabeth ; Ceesay, Sainey ; Hutchins, Harry ; da Silva, Eunice Teixeira ; Ndiath, Mamadou Ousmane ; Jones, Robert T. ; Vasileva, Hristina ; Phelan, Jody ; Acford-Palmer, Holly ; Collins, Emma ; Rodrigues, Amabelia ; Krishna, Sanjeev ; Clark, Taane G. ; Last, Anna ; Campino, Susana
Publisher:England: BioMed Central Ltd
Journal title:Parasites & vectors, 2024-01, Vol.17 (1), p.10-10, Article 10
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Next Generation-Targeted Amplicon Sequencing (NG-TAS): an optimised protocol and computational pipeline for cost-effective profiling of circulating tumour DNA
Author / Creator:Gao, Meiling ; Callari, Maurizio ; Beddowes, Emma ; Sammut, Stephen-John ; Grzelak, Marta ; Biggs, Heather ; Jones, Linda ; Boumertit, Abdelhamid ; Linn, Sabine C. ; Cortes, Javier ; Oliveira, Mafalda ; Baird, Richard ; Chin, Suet-Feung ; Caldas, Carlos
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2019-01, Vol.11 (1), p.1-1, Article 1
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Genetic mutation analysis of the malignant transformation of sinonasal inverted papilloma by targeted amplicon sequencing
Author / Creator:Yasukawa, Shinichiro ; Kano, Satoshi ; Hatakeyama, Hiromitsu ; Nakamaru, Yuji ; Takagi, Dai ; Mizumachi, Takatsugu ; Suzuki, Masanobu ; Suzuki, Takayoshi ; Nakazono, Akira ; Tanaka, Shinya ; Nishihara, Hiroshi ; Homma, Akihiro
Publisher:Tokyo: Springer Japan
Journal title:International journal of clinical oncology, 2018-10, Vol.23 (5), p.835-843
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ArticlesPeer ReviewedFull Text
A next generation targeted amplicon sequencing method to screen for insecticide resistance mutations in Aedes aegypti populations reveals a rdl mutation in mosquitoes from Cabo Verde
Author / Creator:Emma L. Collins ; Jody E. Phelan ; Magdalena Hubner ; Anton Spadar ; Monica Campos ; Daniel Ward ; Holly Acford-Palmer ; Ana Rita Gomes ; Keily Silva ; Lara Ferrero Gomez ; Taane G. Clark ; Susana Campino
Publisher:Public Library of Science (PLoS)
Journal title:PLoS neglected tropical diseases, 2022-12, Vol.16 (12)
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Targeted amplicon sequencing of 40 nuclear genes supports a single introduction and rapid radiation of Hawaiian Metrosideros (Myrtaceae)
Author / Creator:Dupuis, Julian R. ; Pillon, Yohan ; Sakishima, Tomoko ; Gemmill, Chrissen E. C. ; Chamala, Srikar ; Barbazuk, W. Brad ; Geib, Scott M. ; Stacy, Elizabeth A.
Publisher:Vienna: Springer Science + Business Media
Journal title:Plant systematics and evolution, 2019-12, Vol.305 (10), p.961-974
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Showing 1 to 20 of 177 results

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Targeted amplicon sequencing + next-generation sequencing–based bulked segregant analysis identified genetic loci associated with preharvest sprouting tolerance in common buckwheat (Fagopyrum esculent...

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DUDE-Seq: Fast, flexible, and robust denoising for targeted amplicon sequencing

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A SMRT approach for targeted amplicon sequencing of museum specimens (Lepidoptera)—patterns of nucleotide misincorporation

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Combined bacterial and fungal targeted amplicon sequencing of respiratory samples: Does the DNA extraction method matter?

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Optimisation and Benchmarking of Targeted Amplicon Sequencing for Mycobiome Analysis of Respiratory Specimens

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Genomic insights into the pathogenesis of Epstein–Barr virus-associated diffuse large B-cell lymphoma by whole-genome and targeted amplicon sequencing

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High throughput human genotyping for variants associated with malarial disease outcomes using custom targeted amplicon sequencing

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Handling of targeted amplicon sequencing data focusing on index hopping and demultiplexing using a nested metabarcoding approach in ecology

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Application of a targeted amplicon sequencing panel to screen for insecticide resistance mutations in Anopheles darlingi populations from Brazil

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Enhanced specificity of Bacillus metataxonomics using a tuf -targeted amplicon sequencing approach

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Clinical impact of targeted amplicon sequencing for meningioma as a practical clinical-sequencing system

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Detection of insecticide resistance markers in Anopheles funestus from the Democratic Republic of the Congo using a targeted amplicon sequencing panel

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A next generation targeted amplicon sequencing method to screen for insecticide resistance mutations in Aedes aegypti populations reveals a rdl mutation in mosquitoes from Cabo Verde

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Genetic variants and copy number changes in soft tissue leiomyosarcoma detected by targeted amplicon sequencing

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Combined bacterial and fungal targeted amplicon sequencing of respiratory samples: Does the DNA extraction method matter?

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Genomic surveillance of Anopheles mosquitoes on the Bijagós Archipelago using custom targeted amplicon sequencing identifies mutations associated with insecticide resistance

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Next Generation-Targeted Amplicon Sequencing (NG-TAS): an optimised protocol and computational pipeline for cost-effective profiling of circulating tumour DNA

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Genetic mutation analysis of the malignant transformation of sinonasal inverted papilloma by targeted amplicon sequencing

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A next generation targeted amplicon sequencing method to screen for insecticide resistance mutations in Aedes aegypti populations reveals a rdl mutation in mosquitoes from Cabo Verde

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Targeted amplicon sequencing of 40 nuclear genes supports a single introduction and rapid radiation of Hawaiian Metrosideros (Myrtaceae)

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