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18 results for Van+Tonder,+Andries+J

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ArticlesPeer ReviewedFull Text
Inferring Mycobacterium bovis transmission between cattle and badgers using isolates from the Randomised Badger Culling Trial
Author / Creator:van Tonder, Andries J. ; Thornton, Mark J. ; Conlan, Andrew J. K. ; Jolley, Keith A. ; Goolding, Lee ; Mitchell, Andrew P. ; Dale, James ; Palkopoulou, Eleftheria ; Hogarth, Philip J. ; Hewinson, R. Glyn ; Wood, James L. N. ; Parkhill, Julian
Publisher:United States: Public Library of Science
Journal title:PLoS pathogens, 2021-11, Vol.17 (11), p.e1010075-e1010075
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Relationships among streptococci from the mitis group, misidentified as Streptococcus pneumoniae
Author / Creator:Sadowy, Ewa ; Bojarska, Agnieszka ; Kuch, Alicja ; Skoczyńska, Anna ; Jolley, Keith A. ; Maiden, Martin C. J. ; van Tonder, Andries J. ; Hammerschmidt, Sven ; Hryniewicz, Waleria
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:European journal of clinical microbiology & infectious diseases, 2020-10, Vol.39 (10), p.1865-1878
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Molecular epidemiology and whole genome sequencing analysis of clinical Mycobacterium bovis from Ghana
Author / Creator:Otchere, Isaac Darko ; van Tonder, Andries J. ; Asante-Poku, Adwoa ; Sánchez-Busó, Leonor ; Coscollá, Mireia ; Osei-Wusu, Stephen ; Asare, Prince ; Aboagye, Samuel Yaw ; Ekuban, Samuel Acquah ; Yahayah, Abdallah Iddrisu ; Forson, Audrey ; Baddoo, Akosua ; Laryea, Clement ; Parkhill, Julian ; Harris, Simon R. ; Gagneux, Sebastien ; Yeboah-Manu, Dorothy
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-03, Vol.14 (3), p.e0209395
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Defining the Estimated Core Genome of Bacterial Populations Using a Bayesian Decision Model
Author / Creator:van Tonder, Andries J. ; Mistry, Shilan ; Bray, James E. ; Hill, Dorothea M. C. ; Cody, Alison J. ; Farmer, Chris L. ; Klugman, Keith P. ; von Gottberg, Anne ; Bentley, Stephen D. ; Parkhill, Julian ; Jolley, Keith A. ; Maiden, Martin C. J. ; Brueggemann, Angela B.
Publisher:United States: Public Library of Science
Journal title:PLoS computational biology, 2014-08, Vol.10 (8), p.e1003788-e1003788
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Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study
Author / Creator:Lo, Stephanie W ; Gladstone, Rebecca A ; van Tonder, Andries J ; Lees, John A ; du Plessis, Mignon ; Benisty, Rachel ; Givon-Lavi, Noga ; Hawkins, Paulina A ; Cornick, Jennifer E ; Kwambana-Adams, Brenda ; Law, Pierra Y ; Ho, Pak Leung ; Antonio, Martin ; Everett, Dean B ; Dagan, Ron ; von Gottberg, Anne ; Klugman, Keith P ; McGee, Lesley ; Breiman, Robert F ; Bentley, Stephen D ; Brooks, Abdullah W ; Corso, Alejandra ; Davydov, Alexander ; Maguire, Alison ; Pollard, Andrew ; Kiran, Anmol ; Skoczynska, Anna ; Moiane, Benild ; Beall, Bernard ; Sigauque, Betuel ; Aanensen, David ; Lehmann, Deborah ; Faccone, Diego ; Foster-Nyarko, Ebenezer ; Bojang, Ebrima ; Egorova, Ekaterina ; Voropaeva, Elena ; Sampane-Donkor, Eric ; Sadowy, Ewa ; Bigogo, Godfrey ; Mucavele, Helio ; Belabbès, Houria ; Diawara, Idrissa ; Moïsi, Jennifer ; Verani, Jennifer ; Keenan, Jeremy ; Nair Thulasee Bhai, Jyothish N ; Ndlangisa, Kedibone M ; Zerouali, Khalid ; Ravikumar, K L ; Titov, Leonid ; De Gouveia, Linda ; Alaerts, Maaike ; Ip, Margaret ; de Cunto Brandileone, Maria Cristina ; Hasanuzzaman, Md ; Paragi, Metka ; Nurse-Lucas, Michele ; Ali, Mushal ; Elmdaghri, Naima ; Croucher, Nicholas ; Wolter, Nicole ; Porat, Nurit ; Eser, Özgen Köseoglu ; Akpaka, Patrick E ; Turner, Paul ; Gagetti, Paula ; Tientcheu, Peggy-Estelle ; Carter, Philip E ; Mostowy, Rafal ; Kandasamy, Rama ; Ford, Rebecca ; Henderson, Rebecca ; Malaker, Roly ; Shakoor, Sadia ; Grassi Almeida, Samanta Cristine ; Saha, Samir K ; Doiphode, Sanjay ; Madhi, Shabir A ; Devi Sekaran, Shamala ; Srifuengfung, Somporn ; Obaro, Stephen ; Clarke, Stuart C ; Nzenze, Susan A ; Kastrin, Tamara ; Ochoa, Theresa J ; Balaji, Veeraraghavan ; Hryniewicz, Waleria ; Urban, Yulia
Publisher:United States: Elsevier Ltd
Journal title:The Lancet infectious diseases, 2019-07, Vol.19 (7), p.759-769
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ArticlesPeer ReviewedFull Text
Arginine-deprivation–induced oxidative damage sterilizes Mycobacterium tuberculosis
Author / Creator:Tiwari, Sangeeta ; van Tonder, Andries J. ; Vilchèze, Catherine ; Mendes, Vitor ; Thomas, Sherine E. ; Malek, Adel ; Chen, Bing ; Chen, Mei ; Kim, John ; Blundell, Tom L. ; Parkhill, Julian ; Weinrick, Brian ; Berney, Michael ; Jacobs, William R.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2018-09, Vol.115 (39), p.9779-9784
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Genomic analyses of pneumococci reveal a wide diversity of bacteriocins – including pneumocyclicin, a novel circular bacteriocin
Author / Creator:Bogaardt, Carlijn ; van Tonder, Andries J ; Brueggemann, Angela B
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2015-07, Vol.16 (1), p.554-554, Article 554
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ArticlesPeer ReviewedFull Text
Pneumococcal prophages are diverse, but not without structure or history
Author / Creator:Brueggemann, Angela B. ; Harrold, Caroline L. ; Rezaei Javan, Reza ; van Tonder, Andries J. ; McDonnell, Angus J. ; Edwards, Ben A.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-02, Vol.7 (1), p.42976-42976, Article 42976
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Diverse Streptococcus pneumoniae Strains Drive a Mucosal-Associated Invariant T-Cell Response Through Major Histocompatibility Complex class I–Related Molecule–Dependent and Cytokine-Driven Pathways
Author / Creator:Kurioka, Ayako ; van Wilgenburg, Bonnie ; Javan, Reza Rezaei ; Hoyle, Ryan ; van Tonder, Andries J ; Harrold, Caroline L ; Leng, Tianqi ; Howson, Lauren J ; Shepherd, Dawn ; Cerundolo, Vincenzo ; Brueggemann, Angela B ; Klenerman, Paul
Publisher:United States: Oxford University Press
Journal title:The Journal of infectious diseases, 2018-03, Vol.217 (6), p.988-999
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ArticlesPeer ReviewedFull Text
International links between Streptococcus pneumoniae vaccine serotype 4 sequence type (ST) 801 in Northern European shipyard outbreaks of invasive pneumococcal disease
Author / Creator:Gladstone, R.A ; Siira, L ; Brynildsrud, O.B ; Vestrheim, D.F ; Turner, P ; Clarke, S.C ; Srifuengfung, S ; Ford, R ; Lehmann, D ; Egorova, E ; Voropaeva, E ; Haraldsson, G ; Kristinsson, K.G ; McGee, L ; Breiman, R.F ; Bentley, S.D ; Sheppard, C.L ; Fry, N.K ; Corander, J ; Toropainen, M ; Steens, A
Publisher:Netherlands: Elsevier Ltd
Journal title:Vaccine, 2022-02, Vol.40 (7), p.1054-1060
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ArticlesFull Text
Molecular epidemiology and whole genome sequencing analysis of clinical Mycobacterium bovis from Ghana
Author / Creator:Isaac Darko Otchere ; Van Tonder, Andries J ; Asante-Poku, Adwoa ; Sánchez-Busó, Leonor ; Coscollá, Mireia ; Osei-Wusu, Stephen ; Asare, Prince ; Aboagye, Samuel Yaw ; Samuel Acquah Ekuban ; Abdallah Iddrisu Yahayah ; son, Audry ; Baddoo, Akosua ; Laryea, Clement ; Parkhill, Julian ; Harris, Simon R ; Gagneux, Sebastien ; Yeboah-Manu, Dorothy
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-12
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SeroBA: rapid high-throughput serotyping of Streptococcus pneumoniae from whole genome sequence data
Author / Creator:Epping, Lennard ; Van Tonder, Andries J ; Gladstone, Rebecca A ; The Global Pneumococcal Sequencing Consortium ; Bentley, Stephen D ; Page, Andrew J ; Keane, Jacqueline A
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2017-09
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Diverse Streptococcus pneumoniae strains drive a MAIT cell response through MR1-dependent and cytokine-driven pathways
Author / Creator:Kurioka, Ayako ; Bonnie Van Wilgenburg ; Reza Rezaei Javan ; Hoyle, Ryan ; Van Tonder, Andries J ; Harrold, Caroline L ; Leng, Tianqi ; Howson, Lauren J ; Shepherd, Dawn ; Cerundolo, Vincenzo ; Brueggemann, Angela B ; Klenerman, Paul
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2017-07
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Defining the Estimated Core Genome of Bacterial Populations Using a Bayesian Decision Model: e1003788
Author / Creator:van Tonder, Andries J ; Mistry, Shilan ; Bray, James E ; Hill, Dorothea MC ; Cody, Alison J ; Farmer, Chris L ; Klugman, Keith P ; von Gottberg, Anne ; Bentley, Stephen D ; Parkhill, Julian
Publisher:San Francisco: Public Library of Science
Journal title:PLoS computational biology, 2014-08, Vol.10 (8)
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Predicted structural mimicry of spike receptor-binding motifs from highly pathogenic human coronaviruses
Author / Creator:Beaudoin, Christopher A ; Jamasb, Arian Rokkum ; Alsulami, Ali ; Copoiu, Liviu ; Van Tonder, Andries J ; Sharif Hala ; Bannerman, Bridget P ; Thomas, Sherine E ; Sundeep Chaitanya Vedithi ; Torres, Pedro H M ; Blundell, Tom L
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-04
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Genome sequencing reveals that Streptococcus pneumoniae possesses a large and diverse repertoire of antimicrobial toxins
Author / Creator:Reza Rezaei Javan ; Van Tonder, Andries J ; King, James P ; Harrold, Caroline L ; Brueggemann, Angela B
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-03
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Population structure and transmission of Mycobacterium bovis in Ethiopia
Author / Creator:Almaw, Gizat ; Mekonnen, Getnet Abie ; Mihret, Adane ; Aseffa, Abraham ; Taye, Hawult ; Conlan, Andrew Jk ; Gumi, Balako ; Zewude, Aboma ; Aliy, Abde ; Tamiru, Mekdes ; Abebe Olani ; Lakew, Matios ; Sombo, Melaku ; Solomon Gebre ; Diguimbaye, Colette ; Hilty, Markus ; Fané, Adama ; Müller, Borna ; Hewinson, R Glyn ; Ellis, Richard J ; Nunez-Garcia, Javier ; Palkopoulou, Eleftheria ; The Ethicobots Consortium ; Abebe, Tamrat ; Ameni, Gobena ; Parkhill, Julian ; Wood, James Ln ; Berg, Stefan ; Van Tonder, Andries J
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-11
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Heterogeneity Among Estimates Of The Core Genome And Pan-Genome In Different Pneumococcal Populations
Author / Creator:Van Tonder, Andries J ; Bray, James E ; Jolley, Keith A ; Quirk, Sigridur J ; Haraldsson, Gunnsteinn ; Maiden, Martin C J ; Bentley, Stephen D ; Haraldsson, Asgeir ; Erlendsdottir, Helga ; Kristinsson, Karl G ; Brueggemann, Angela B
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2017-05
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Inferring Mycobacterium bovis transmission between cattle and badgers using isolates from the Randomised Badger Culling Trial

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Relationships among streptococci from the mitis group, misidentified as Streptococcus pneumoniae

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Molecular epidemiology and whole genome sequencing analysis of clinical Mycobacterium bovis from Ghana

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Defining the Estimated Core Genome of Bacterial Populations Using a Bayesian Decision Model

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Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study

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Arginine-deprivation–induced oxidative damage sterilizes Mycobacterium tuberculosis

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Genomic analyses of pneumococci reveal a wide diversity of bacteriocins – including pneumocyclicin, a novel circular bacteriocin

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Pneumococcal prophages are diverse, but not without structure or history

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Diverse Streptococcus pneumoniae Strains Drive a Mucosal-Associated Invariant T-Cell Response Through Major Histocompatibility Complex class I–Related Molecule–Dependent and Cytokine-Driven Pathways

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International links between Streptococcus pneumoniae vaccine serotype 4 sequence type (ST) 801 in Northern European shipyard outbreaks of invasive pneumococcal disease

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Molecular epidemiology and whole genome sequencing analysis of clinical Mycobacterium bovis from Ghana

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SeroBA: rapid high-throughput serotyping of Streptococcus pneumoniae from whole genome sequence data

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Diverse Streptococcus pneumoniae strains drive a MAIT cell response through MR1-dependent and cytokine-driven pathways

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Defining the Estimated Core Genome of Bacterial Populations Using a Bayesian Decision Model: e1003788

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Predicted structural mimicry of spike receptor-binding motifs from highly pathogenic human coronaviruses

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Genome sequencing reveals that Streptococcus pneumoniae possesses a large and diverse repertoire of antimicrobial toxins

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Population structure and transmission of Mycobacterium bovis in Ethiopia

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Heterogeneity Among Estimates Of The Core Genome And Pan-Genome In Different Pneumococcal Populations

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