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223 results for Vapalahti,+Olli

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A serological assay to detect SARS-CoV-2 seroconversion in humans
Author / Creator:Amanat, Fatima ; Stadlbauer, Daniel ; Strohmeier, Shirin ; Nguyen, Thi H. O. ; Chromikova, Veronika ; McMahon, Meagan ; Jiang, Kaijun ; Arunkumar, Guha Asthagiri ; Jurczyszak, Denise ; Polanco, Jose ; Bermudez-Gonzalez, Maria ; Kleiner, Giulio ; Aydillo, Teresa ; Miorin, Lisa ; Fierer, Daniel S. ; Lugo, Luz Amarilis ; Kojic, Erna Milunka ; Stoever, Jonathan ; Liu, Sean T. H. ; Cunningham-Rundles, Charlotte ; Felgner, Philip L. ; Moran, Thomas ; García-Sastre, Adolfo ; Caplivski, Daniel ; Cheng, Allen C. ; Kedzierska, Katherine ; Vapalahti, Olli ; Hepojoki, Jussi M. ; Simon, Viviana ; Krammer, Florian
Publisher:New York: Nature Publishing Group US
Journal title:Nature medicine, 2020-07, Vol.26 (7), p.1033-1036
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COVID-19 mRNA vaccine induced antibody responses against three SARS-CoV-2 variants
Author / Creator:Jalkanen, Pinja ; Kolehmainen, Pekka ; Häkkinen, Hanni K. ; Huttunen, Moona ; Tähtinen, Paula A. ; Lundberg, Rickard ; Maljanen, Sari ; Reinholm, Arttu ; Tauriainen, Sisko ; Pakkanen, Sari H. ; Levonen, Iris ; Nousiainen, Arttu ; Miller, Taru ; Välimaa, Hanna ; Ivaska, Lauri ; Pasternack, Arja ; Naves, Rauno ; Ritvos, Olli ; Österlund, Pamela ; Kuivanen, Suvi ; Smura, Teemu ; Hepojoki, Jussi ; Vapalahti, Olli ; Lempainen, Johanna ; Kakkola, Laura ; Kantele, Anu ; Julkunen, Ilkka
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-06, Vol.12 (1), p.3991-3991, Article 3991
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Tick-borne encephalitis
Author / Creator:Lindquist, Lars, Prof ; Vapalahti, Olli, Prof
Publisher:London: Elsevier Ltd
Journal title:The Lancet (British edition), 2008-05, Vol.371 (9627), p.1861-1871
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New-onset type 1 diabetes in Finnish children during the COVID-19 pandemic
Author / Creator:Salmi, Heli ; Heinonen, Santtu ; Hästbacka, Johanna ; Lääperi, Mitja ; Rautiainen, Paula ; Miettinen, Päivi J ; Vapalahti, Olli ; Hepojoki, Jussi ; Knip, Mikael
Publisher:England: BMJ Publishing Group Ltd and Royal College of Paediatrics and Child Health
Journal title:Archives of disease in childhood, 2022-02, Vol.107 (2), p.180-185
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Longitudinal proteomic profiling reveals increased early inflammation and sustained apoptosis proteins in severe COVID-19
Author / Creator:Haljasmägi, Liis ; Salumets, Ahto ; Rumm, Anna Pauliina ; Jürgenson, Meeri ; Krassohhina, Ekaterina ; Remm, Anu ; Sein, Hanna ; Kareinen, Lauri ; Vapalahti, Olli ; Sironen, Tarja ; Peterson, Hedi ; Milani, Lili ; Tamm, Anu ; Hayday, Adrian ; Kisand, Kai ; Peterson, Pärt
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-11, Vol.10 (1), p.20533-20533, Article 20533
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Comparative analysis of COVID-19 vaccine responses and third booster dose-induced neutralizing antibodies against Delta and Omicron variants
Author / Creator:Belik, Milja ; Jalkanen, Pinja ; Lundberg, Rickard ; Reinholm, Arttu ; Laine, Larissa ; Väisänen, Elina ; Skön, Marika ; Tähtinen, Paula A. ; Ivaska, Lauri ; Pakkanen, Sari H. ; Häkkinen, Hanni K. ; Ortamo, Eeva ; Pasternack, Arja ; Ritvos, Mikael A. ; Naves, Rauno A. ; Miettinen, Simo ; Sironen, Tarja ; Vapalahti, Olli ; Ritvos, Olli ; Österlund, Pamela ; Kantele, Anu ; Lempainen, Johanna ; Kakkola, Laura ; Kolehmainen, Pekka ; Julkunen, Ilkka
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-05, Vol.13 (1), p.2476-2476, Article 2476
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HAVoC, a bioinformatic pipeline for reference-based consensus assembly and lineage assignment for SARS-CoV-2 sequences
Author / Creator:Truong Nguyen, Phuoc Thien ; Plyusnin, Ilya ; Sironen, Tarja ; Vapalahti, Olli ; Kant, Ravi ; Smura, Teemu
Publisher:London: BioMed Central Ltd
Journal title:BMC bioinformatics, 2021-07, Vol.22 (1), p.1-373, Article 373
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Zika Virus Infection with Prolonged Maternal Viremia and Fetal Brain Abnormalities
Author / Creator:Driggers, Rita W ; Ho, Cheng-Ying ; Korhonen, Essi M ; Kuivanen, Suvi ; Jääskeläinen, Anne J ; Smura, Teemu ; Rosenberg, Avi ; Hill, D. Ashley ; DeBiasi, Roberta L ; Vezina, Gilbert ; Timofeev, Julia ; Rodriguez, Fausto J ; Levanov, Lev ; Razak, Jennifer ; Iyengar, Preetha ; Hennenfent, Andrew ; Kennedy, Richard ; Lanciotti, Robert ; du Plessis, Adre ; Vapalahti, Olli
Publisher:United States: Massachusetts Medical Society
Journal title:The New England journal of medicine, 2016-06, Vol.374 (22), p.2142-2151
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Enhanced Viral Metagenomics with Lazypipe 2
Author / Creator:Plyusnin, Ilya ; Vapalahti, Olli ; Sironen, Tarja ; Kant, Ravi ; Smura, Teemu
Publisher:Switzerland: MDPI AG
Journal title:Viruses, 2023-02, Vol.15 (2), p.431
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Characterization of low-density granulocytes in COVID-19
Author / Creator:Cabrera, Luz E. ; Pekkarinen, Pirkka T. ; Alander, Maria ; Nowlan, Kirsten H. A. ; Nguyen, Ngoc Anh ; Jokiranta, Suvi ; Kuivanen, Suvi ; Patjas, Anu ; Mero, Sointu ; Pakkanen, Sari H. ; Heinonen, Santtu ; Kantele, Anu ; Vapalahti, Olli ; Kekäläinen, Eliisa ; Strandin, Tomas
Publisher:San Francisco: Public Library of Science
Journal title:PLoS pathogens, 2021-07, Vol.17 (7), p.e1009721-e1009721
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Real-life clinical sensitivity of SARS-CoV-2 RT-PCR test in symptomatic patients
Author / Creator:Kortela, Elisa ; Kirjavainen, Vesa ; Ahava, Maarit J. ; Jokiranta, Suvi T. ; But, Anna ; Lindahl, Anna ; Jääskeläinen, Anu E. ; Jääskeläinen, Annemarjut J. ; Järvinen, Asko ; Jokela, Pia ; Kallio-Kokko, Hannimari ; Loginov, Raisa ; Mannonen, Laura ; Ruotsalainen, Eeva ; Sironen, Tarja ; Vapalahti, Olli ; Lappalainen, Maija ; Kreivi, Hanna-Riikka ; Jarva, Hanna ; Kurkela, Satu ; Kekäläinen, Eliisa
Publisher:United States: Public Library of Science
Journal title:PloS one, 2021-05, Vol.16 (5), p.e0251661-e0251661
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ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies
Author / Creator:Plyusnin, Ilya ; Truong Nguyen, Phuoc Thien ; Sironen, Tarja ; Vapalahti, Olli ; Smura, Teemu ; Kant, Ravi
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2022-05, Vol.23 (1), p.196-16, Article 196
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Bombali Virus in Mops condylurus Bat, Kenya
Author / Creator:Forbes, Kristian M. ; Webala, Paul W. ; Jääskeläinen, Anne J. ; Abdurahman, Samir ; Ogola, Joseph ; Masika, Moses M. ; Kivistö, Ilkka ; Alburkat, Hussein ; Plyusnin, Ilya ; Levanov, Lev ; Korhonen, Essi M. ; Huhtamo, Eili ; Mwaengo, Dufton ; Smura, Teemu ; Mirazimi, Ali ; Anzala, Omu ; Vapalahti, Olli ; Sironen, Tarja
Publisher:United States: U.S. National Center for Infectious Diseases
Journal title:Emerging infectious diseases, 2019-05, Vol.25 (5), p.955-957
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Co-infecting Reptarenaviruses Can Be Vertically Transmitted in Boa Constrictor
Author / Creator:Keller, Saskia ; Hetzel, Udo ; Sironen, Tarja ; Korzyukov, Yegor ; Vapalahti, Olli ; Kipar, Anja ; Hepojoki, Jussi
Publisher:United States: Public Library of Science
Journal title:PLoS pathogens, 2017-01, Vol.13 (1), p.e1006179-e1006179
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Infective SARS-CoV-2 in Skull Sawdust at Autopsy, Finland
Author / Creator:Kantonen, Jonas N. ; Kuivanen, Suvi ; Smura, Teemu ; Puttonen, Henri ; Kekäläinen, Eliisa ; Sajantila, Antti ; Myllykangas, Liisa ; Kantele, Anu ; Vapalahti, Olli ; Mäyränpää, Mikko I. ; Carpén, Olli
Publisher:United States: U.S. National Center for Infectious Diseases
Journal title:Emerging infectious diseases, 2024-08, Vol.30 (8), p.1735-1737
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Phylogenetic Characterization of Orthohantavirus dobravaense (Dobrava Virus)
Author / Creator:Erdin, Mert ; Polat, Ceylan ; Smura, Teemu ; Irmak, Sercan ; Cetintas, Ortac ; Cogal, Muhsin ; Colak, Faruk ; Karatas, Ahmet ; Sozen, Mustafa ; Matur, Ferhat ; Vapalahti, Olli ; Sironen, Tarja ; Oktem, Ibrahim Mehmet Ali
Publisher:United States: U.S. National Center for Infectious Diseases
Journal title:Emerging infectious diseases, 2024-04, Vol.30 (4), p.779-782
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Generation of Anti-Boa Immunoglobulin Antibodies for Serodiagnostic Applications, and Their Use to Detect Anti-Reptarenavirus Antibodies in Boa Constrictor
Author / Creator:Korzyukov, Yegor ; Hetzel, Udo ; Kipar, Anja ; Vapalahti, Olli ; Hepojoki, Jussi
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-06, Vol.11 (6), p.e0158417-e0158417
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Pan and Core Genome Analysis of 183 Mycobacterium tuberculosis Strains Revealed a High Inter-Species Diversity among the Human Adapted Strains
Author / Creator:Zakham, Fathiah ; Sironen, Tarja ; Vapalahti, Olli ; Kant, Ravi
Publisher:Switzerland: MDPI AG
Journal title:Antibiotics (Basel), 2021-04, Vol.10 (5), p.500
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Antibody response in snakes with boid inclusion body disease
Author / Creator:Windbichler, Katharina ; Michalopoulou, Eleni ; Palamides, Pia ; Pesch, Theresa ; Jelinek, Christine ; Vapalahti, Olli ; Kipar, Anja ; Hetzel, Udo ; Hepojoki, Jussi
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-09, Vol.14 (9), p.e0221863-e0221863
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Partial Genome Characterization of Novel Parapoxvirus in Horse, Finland
Author / Creator:Virtanen, Jenni ; Hautaniemi, Maria ; Dutra, Lara ; Plyusnin, Ilya ; Hautala, Katja ; Smura, Teemu ; Vapalahti, Olli ; Sironen, Tarja ; Kant, Ravi ; Kinnunen, Paula M.
Publisher:Atlanta: U.S. National Center for Infectious Diseases
Journal title:Emerging infectious diseases, 2023-09, Vol.29 (9), p.1941-1944
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A serological assay to detect SARS-CoV-2 seroconversion in humans

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COVID-19 mRNA vaccine induced antibody responses against three SARS-CoV-2 variants

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Tick-borne encephalitis

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New-onset type 1 diabetes in Finnish children during the COVID-19 pandemic

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Longitudinal proteomic profiling reveals increased early inflammation and sustained apoptosis proteins in severe COVID-19

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Comparative analysis of COVID-19 vaccine responses and third booster dose-induced neutralizing antibodies against Delta and Omicron variants

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HAVoC, a bioinformatic pipeline for reference-based consensus assembly and lineage assignment for SARS-CoV-2 sequences

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Zika Virus Infection with Prolonged Maternal Viremia and Fetal Brain Abnormalities

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Enhanced Viral Metagenomics with Lazypipe 2

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Characterization of low-density granulocytes in COVID-19

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Real-life clinical sensitivity of SARS-CoV-2 RT-PCR test in symptomatic patients

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ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies

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Bombali Virus in Mops condylurus Bat, Kenya

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Co-infecting Reptarenaviruses Can Be Vertically Transmitted in Boa Constrictor

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Infective SARS-CoV-2 in Skull Sawdust at Autopsy, Finland

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Phylogenetic Characterization of Orthohantavirus dobravaense (Dobrava Virus)

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Generation of Anti-Boa Immunoglobulin Antibodies for Serodiagnostic Applications, and Their Use to Detect Anti-Reptarenavirus Antibodies in Boa Constrictor

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Pan and Core Genome Analysis of 183 Mycobacterium tuberculosis Strains Revealed a High Inter-Species Diversity among the Human Adapted Strains

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Antibody response in snakes with boid inclusion body disease

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Partial Genome Characterization of Novel Parapoxvirus in Horse, Finland

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