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ArticlesPeer ReviewedFull Text
Population genomics of Klebsiella pneumoniae
Author / Creator:Wyres, Kelly L. ; Lam, Margaret M. C. ; Holt, Kathryn E.
Publisher:London: Nature Publishing Group UK
Journal title:Nature reviews. Microbiology, 2020-06, Vol.18 (6), p.344-359
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Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae
Author / Creator:Wyres, Kelly L. ; Wick, Ryan R. ; Judd, Louise M. ; Froumine, Roni ; Tokolyi, Alex ; Gorrie, Claire L. ; Lam, Margaret M. C. ; Duchêne, Sebastián ; Jenney, Adam ; Holt, Kathryn E.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2019-04, Vol.15 (4), p.e1008114-e1008114
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A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex
Author / Creator:Lam, Margaret M. C. ; Wick, Ryan R. ; Watts, Stephen C. ; Cerdeira, Louise T. ; Wyres, Kelly L. ; Holt, Kathryn E.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-07, Vol.12 (1), p.4188-4188, Article 4188
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Trycycler: consensus long-read assemblies for bacterial genomes
Author / Creator:Wick, Ryan R. ; Judd, Louise M. ; Cerdeira, Louise T. ; Hawkey, Jane ; Méric, Guillaume ; Vezina, Ben ; Wyres, Kelly L. ; Holt, Kathryn E.
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2021-09, Vol.22 (1), p.266-266, Article 266
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Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination
Author / Creator:Lam, Margaret M. C. ; Wyres, Kelly L. ; Duchêne, Sebastian ; Wick, Ryan R. ; Judd, Louise M. ; Gan, Yunn-Hwen ; Hoh, Chu-Han ; Archuleta, Sophia ; Molton, James S. ; Kalimuddin, Shirin ; Koh, Tse Hsien ; Passet, Virginie ; Brisse, Sylvain ; Holt, Kathryn E.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2018-07, Vol.9 (1), p.2703-10, Article 2703
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Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae
Author / Creator:Lam, Margaret M. C. ; Wyres, Kelly L. ; Judd, Louise M. ; Wick, Ryan R. ; Jenney, Adam ; Brisse, Sylvain ; Holt, Kathryn E.
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2018-10, Vol.10 (1), p.77-77, Article 77
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Genomic dissection of Klebsiella pneumoniae infections in hospital patients reveals insights into an opportunistic pathogen
Author / Creator:Gorrie, Claire L. ; Mirčeta, Mirjana ; Wick, Ryan R. ; Judd, Louise M. ; Lam, Margaret M. C. ; Gomi, Ryota ; Abbott, Iain J. ; Thomson, Nicholas R. ; Strugnell, Richard A. ; Pratt, Nigel F. ; Garlick, Jill S. ; Watson, Kerrie M. ; Hunter, Peter C. ; Pilcher, David V. ; McGloughlin, Steve A. ; Spelman, Denis W. ; Wyres, Kelly L. ; Jenney, Adam W. J. ; Holt, Kathryn E.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-05, Vol.13 (1), p.3017-17, Article 3017
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Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales
Author / Creator:Holt, Kathryn E. ; Lassalle, Florent ; Wyres, Kelly L. ; Wick, Ryan ; Mostowy, Rafał J.
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2020-07, Vol.14 (7), p.1713-1730
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Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia
Author / Creator:Stewart, James ; Judd, Louise M. ; Jenney, Adam ; Holt, Kathryn E. ; Wyres, Kelly L. ; Hawkey, Jane
Publisher:England: BioMed Central Ltd
Journal title:BMC infectious diseases, 2022-08, Vol.22 (1), p.704-704, Article 704
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Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from South and Southeast Asia
Author / Creator:Wyres, Kelly L. ; Nguyen, To N. T. ; Lam, Margaret M. C. ; Judd, Louise M. ; van Vinh Chau, Nguyen ; Dance, David A. B. ; Ip, Margaret ; Karkey, Abhilasha ; Ling, Clare L. ; Miliya, Thyl ; Newton, Paul N. ; Lan, Nguyen Phu Huong ; Sengduangphachanh, Amphone ; Turner, Paul ; Veeraraghavan, Balaji ; Vinh, Phat Voong ; Vongsouvath, Manivanh ; Thomson, Nicholas R. ; Baker, Stephen ; Holt, Kathryn E.
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2020-01, Vol.12 (1), p.11-11, Article 11
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Antimicrobial-Resistant Klebsiella pneumoniae Carriage and Infection in Specialized Geriatric Care Wards Linked to Acquisition in the Referring Hospital
Author / Creator:Gorrie, Claire L ; Mirceta, Mirjana ; Wick, Ryan R ; Judd, Louise M ; Wyres, Kelly L ; Thomson, Nicholas R ; Strugnell, Richard A ; Pratt, Nigel F ; Garlick, Jill S ; Watson, Kerrie M ; Hunter, Peter C ; McGloughlin, Steve A ; Spelman, Denis W ; Jenney, Adam W J ; Holt, Kathryn E
Publisher:US: Oxford University Press
Journal title:Clinical infectious diseases, 2018-07, Vol.67 (2), p.161-170
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Ethanolamine metabolism through two genetically distinct loci enables Klebsiella pneumoniae to bypass nutritional competition in the gut
Author / Creator:Barnes, Andrew J. ; Bennett, Emma F. ; Vezina, Ben ; Hudson, Andrew W. ; Hernandez, Giovanna E. ; Nutter, Noah A. ; Bray, Andrew S. ; Nagpal, Ravinder ; Wyres, Kelly L. ; Zafar, M. Ammar
Publisher:United States: Public Library of Science
Journal title:PLoS pathogens, 2024-05, Vol.20 (5), p.e1012189-e1012189
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A point mutation in recC associated with subclonal replacement of carbapenem-resistant Klebsiella pneumoniae ST11 in China
Author / Creator:Zhou, Kai ; Xue, Chun-Xu ; Xu, Tingting ; Shen, Ping ; Wei, Sha ; Wyres, Kelly L. ; Lam, Margaret M. C. ; Liu, Jinquan ; Lin, Haoyun ; Chen, Yunbo ; Holt, Kathryn E. ; Xiao, Yonghong
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-04, Vol.14 (1), p.2464-2464, Article 2464
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ESBL plasmids in Klebsiella pneumoniae: diversity, transmission and contribution to infection burden in the hospital setting
Author / Creator:Hawkey, Jane ; Wyres, Kelly L. ; Judd, Louise M. ; Harshegyi, Taylor ; Blakeway, Luke ; Wick, Ryan R. ; Jenney, Adam W. J. ; Holt, Kathryn E.
Publisher:London: BioMed Central Ltd
Journal title:Genome medicine, 2022-08, Vol.14 (1), p.1-97, Article 97
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Correction: Evidence of antimicrobial resistance-conferring genetic elements among pneumococci isolated prior to 1974
Author / Creator:Wyres, Kelly L. ; van Tonder, Andries ; Lambertsen, Lotte M. ; Hakenbeck, Regine ; Parkhill, Julian ; Bentley, Stephen D. ; Brueggemann, Angela B.
Publisher:London: BioMed Central Ltd
Journal title:BMC genomics, 2023-11, Vol.24 (1), p.1-664, Article 664
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Differential host susceptibility and bacterial virulence factors driving Klebsiella liver abscess in an ethnically diverse population
Author / Creator:Lee, I. Russel ; Molton, James S. ; Wyres, Kelly L. ; Gorrie, Claire ; Wong, Jocelyn ; Hoh, Chu Han ; Teo, Jeanette ; Kalimuddin, Shirin ; Lye, David C. ; Archuleta, Sophia ; Holt, Kathryn E. ; Gan, Yunn-Hwen
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2016-07, Vol.6 (1), p.29316-29316, Article 29316
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Correction to: Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales
Author / Creator:Holt, Kathryn E. ; Lassalle, Florent ; Wyres, Kelly L. ; Wick, Ryan ; Mostowy, Rafał J.
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2022-05, Vol.16 (5), p.1478-1478
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Environmental Factors Determining the Epidemiology and Population Genetic Structure of the Bacillus cereus Group in the Field
Author / Creator:Raymond, Ben ; Wyres, Kelly L. ; Sheppard, Samuel K. ; Ellis, Richard J. ; Bonsall, Michael B.
Publisher:United States: Public Library of Science
Journal title:PLoS pathogens, 2010-05, Vol.6 (5), p.e1000905
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Bactabolize is a tool for high-throughput generation of bacterial strain-specific metabolic models
Author / Creator:Vezina, Ben ; Watts, Stephen C ; Hawkey, Jane ; Cooper, Helena B ; Judd, Louise M ; Jenney, Adam WJ ; Monk, Jonathan M ; Holt, Kathryn E ; Wyres, Kelly L
Publisher:Cambridge: eLife Sciences Publications Ltd
Journal title:eLife, 2023-10, Vol.12
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Pneumococcal Capsular Switching: A Historical Perspective
Author / Creator:Wyres, Kelly L. ; Lambertsen, Lotte M. ; Croucher, Nicholas J. ; McGee, Lesley ; von Gottberg, Anne ; Liñares, Josefina ; Jacobs, Michael R. ; Kristinsson, Karl G. ; Beall, Bernard W. ; Klugman, Keith P. ; Parkhill, Julian ; Hakenbeck, Regine ; Bentley, Stephen D. ; Brueggemann, Angela B.
Publisher:Oxford: Oxford University Press
Journal title:The Journal of infectious diseases, 2013-02, Vol.207 (3), p.439-449
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Showing 1 to 20 of 66 results

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Population genomics of Klebsiella pneumoniae

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Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae

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A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex

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Trycycler: consensus long-read assemblies for bacterial genomes

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Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination

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Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

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Genomic dissection of Klebsiella pneumoniae infections in hospital patients reveals insights into an opportunistic pathogen

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Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales

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Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia

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Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from South and Southeast Asia

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Antimicrobial-Resistant Klebsiella pneumoniae Carriage and Infection in Specialized Geriatric Care Wards Linked to Acquisition in the Referring Hospital

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Ethanolamine metabolism through two genetically distinct loci enables Klebsiella pneumoniae to bypass nutritional competition in the gut

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A point mutation in recC associated with subclonal replacement of carbapenem-resistant Klebsiella pneumoniae ST11 in China

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ESBL plasmids in Klebsiella pneumoniae: diversity, transmission and contribution to infection burden in the hospital setting

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Correction: Evidence of antimicrobial resistance-conferring genetic elements among pneumococci isolated prior to 1974

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Differential host susceptibility and bacterial virulence factors driving Klebsiella liver abscess in an ethnically diverse population

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Correction to: Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales

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Environmental Factors Determining the Epidemiology and Population Genetic Structure of the Bacillus cereus Group in the Field

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Bactabolize is a tool for high-throughput generation of bacterial strain-specific metabolic models

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Pneumococcal Capsular Switching: A Historical Perspective

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