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SurVIndel2: improving copy number variant calling from next-generation sequencing using hidden split...

SurVIndel2: improving copy number variant calling from next-generation sequencing using hidden split...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_13a792885ae24f3184e46d22f7419c22

SurVIndel2: improving copy number variant calling from next-generation sequencing using hidden split reads

About this item

Full title

SurVIndel2: improving copy number variant calling from next-generation sequencing using hidden split reads

Author / Creator

Publisher

London: Nature Publishing Group UK

Journal title

Nature communications, 2024-12, Vol.15 (1), p.10473-16, Article 10473

Language

English

Formats

Publication information

Publisher

London: Nature Publishing Group UK

More information

Scope and Contents

Contents

Deletions and tandem duplications (commonly called CNVs) represent the majority of structural variations in a human genome. They can be identified using short reads, but because they frequently occur in repetitive regions, existing methods fail to detect most of them. This is because CNVs in repetitive regions often do not produce the evidence need...

Alternative Titles

Full title

SurVIndel2: improving copy number variant calling from next-generation sequencing using hidden split reads

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_13a792885ae24f3184e46d22f7419c22

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_13a792885ae24f3184e46d22f7419c22

Other Identifiers

ISSN

2041-1723

E-ISSN

2041-1723

DOI

10.1038/s41467-024-53087-7

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