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Efficient Genomic Interval Queries Using Augmented Range Trees

Efficient Genomic Interval Queries Using Augmented Range Trees

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_534112f11b594c28b1ca2a7fbe538624

Efficient Genomic Interval Queries Using Augmented Range Trees

About this item

Full title

Efficient Genomic Interval Queries Using Augmented Range Trees

Publisher

London: Nature Publishing Group UK

Journal title

Scientific reports, 2019-03, Vol.9 (1), p.5059-5059, Article 5059

Language

English

Formats

Publication information

Publisher

London: Nature Publishing Group UK

More information

Scope and Contents

Contents

Efficient large-scale annotation of genomic intervals is essential for personal genome interpretation in the realm of precision medicine. There are 13 possible relations between two intervals according to Allen’s interval algebra. Conventional interval trees are routinely used to identify the genomic intervals satisfying a coarse relation with a qu...

Alternative Titles

Full title

Efficient Genomic Interval Queries Using Augmented Range Trees

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_534112f11b594c28b1ca2a7fbe538624

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_534112f11b594c28b1ca2a7fbe538624

Other Identifiers

ISSN

2045-2322

E-ISSN

2045-2322

DOI

10.1038/s41598-019-41451-3

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