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Pitfalls and opportunities for applying latent variables in single-cell eQTL analyses

Pitfalls and opportunities for applying latent variables in single-cell eQTL analyses

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_7b48ecde7c0c4840b123b9f8fdc5d896

Pitfalls and opportunities for applying latent variables in single-cell eQTL analyses

About this item

Full title

Pitfalls and opportunities for applying latent variables in single-cell eQTL analyses

Publisher

England: BioMed Central Ltd

Journal title

Genome Biology, 2023-02, Vol.24 (1), p.33-33, Article 33

Language

English

Formats

Publication information

Publisher

England: BioMed Central Ltd

More information

Scope and Contents

Contents

Using latent variables in gene expression data can help correct unobserved confounders and increase statistical power for expression quantitative trait Loci (eQTL) detection. The probabilistic estimation of expression residuals (PEER) and principal component analysis (PCA) are widely used methods that can remove unwanted variation and improve eQTL...

Alternative Titles

Full title

Pitfalls and opportunities for applying latent variables in single-cell eQTL analyses

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_7b48ecde7c0c4840b123b9f8fdc5d896

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_7b48ecde7c0c4840b123b9f8fdc5d896

Other Identifiers

ISSN

1474-760X,1474-7596

E-ISSN

1474-760X

DOI

10.1186/s13059-023-02873-5

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