Batch correcting single-cell spatial transcriptomics count data with Crescendo improves visualizatio...
Batch correcting single-cell spatial transcriptomics count data with Crescendo improves visualization and detection of spatial gene patterns
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Publisher
England: BioMed Central Ltd
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Language
English
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England: BioMed Central Ltd
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Spatial transcriptomics facilitates gene expression analysis of cells in their spatial anatomical context. Batch effects hinder visualization of gene spatial patterns across samples. We present the Crescendo algorithm to correct for batch effects at the gene expression level and enable accurate visualization of gene expression patterns across multi...
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Batch correcting single-cell spatial transcriptomics count data with Crescendo improves visualization and detection of spatial gene patterns
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TN_cdi_doaj_primary_oai_doaj_org_article_d92b411c90e24eed85c3b82b799f4553
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https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_d92b411c90e24eed85c3b82b799f4553
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ISSN
1474-760X,1474-7596
E-ISSN
1474-760X
DOI
10.1186/s13059-025-03479-9
