Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
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Author / Creator
Univ. of California, Oakland, CA (United States) , Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States). National Energy Research Scientific Computing Center (NERSC) , Sczyrba, Alexander , Hofmann, Peter , Belmann, Peter , Koslicki, David , Janssen, Stefan , Dröge, Johannes , Gregor, Ivan , Majda, Stephan , Fiedler, Jessika , Dahms, Eik , Bremges, Andreas , Fritz, Adrian , Garrido-Oter, Ruben , Jørgensen, Tue Sparholt , Shapiro, Nicole , Blood, Philip D , Gurevich, Alexey , Bai, Yang , Turaev, Dmitrij , DeMaere, Matthew Z , Chikhi, Rayan , Nagarajan, Niranjan , Quince, Christopher , Meyer, Fernando , Balvočiūtė, Monika , Hansen, Lars Hestbjerg , Sørensen, Søren J , Chia, Burton K H , Denis, Bertrand , Froula, Jeff L , Wang, Zhong , Egan, Robert , Don Kang, Dongwan , Cook, Jeffrey J , Deltel, Charles , Beckstette, Michael , Lemaitre, Claire , Peterlongo, Pierre , Rizk, Guillaume , Lavenier, Dominique , Wu, Yu-Wei , Singer, Steven W , Jain, Chirag , Strous, Marc , Klingenberg, Heiner , Meinicke, Peter , Barton, Michael D , Lingner, Thomas , Lin, Hsin-Hung , Liao, Yu-Chieh , Silva, Genivaldo Gueiros Z , Cuevas, Daniel A , Edwards, Robert A , Saha, Surya , Piro, Vitor C , Renard, Bernhard Y , Pop, Mihai , Klenk, Hans-Peter , Göker, Markus , Kyrpides, Nikos C , Woyke, Tanja , Vorholt, Julia A , Schulze-Lefert, Paul , Rubin, Edward M , Darling, Aaron E , Rattei, Thomas and McHardy, Alice C
Publisher
New York: Nature Publishing Group US
Journal title
Language
English
Formats
Publication information
Publisher
New York: Nature Publishing Group US
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More information
Scope and Contents
Contents
The Critical Assessment of Metagenome Interpretation (CAMI) community initiative presents results from its first challenge, a rigorous benchmarking of software for metagenome assembly, binning and taxonomic profiling.
Methods for assembly, taxonomic profiling and binning are key to interpreting metagenome data, but a lack of consensus about benc...
Alternative Titles
Full title
Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
Authors, Artists and Contributors
Author / Creator
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States). National Energy Research Scientific Computing Center (NERSC)
Sczyrba, Alexander
Hofmann, Peter
Belmann, Peter
Koslicki, David
Janssen, Stefan
Dröge, Johannes
Gregor, Ivan
Majda, Stephan
Fiedler, Jessika
Dahms, Eik
Bremges, Andreas
Fritz, Adrian
Garrido-Oter, Ruben
Jørgensen, Tue Sparholt
Shapiro, Nicole
Blood, Philip D
Gurevich, Alexey
Bai, Yang
Turaev, Dmitrij
DeMaere, Matthew Z
Chikhi, Rayan
Nagarajan, Niranjan
Quince, Christopher
Meyer, Fernando
Balvočiūtė, Monika
Hansen, Lars Hestbjerg
Sørensen, Søren J
Chia, Burton K H
Denis, Bertrand
Froula, Jeff L
Wang, Zhong
Egan, Robert
Don Kang, Dongwan
Cook, Jeffrey J
Deltel, Charles
Beckstette, Michael
Lemaitre, Claire
Peterlongo, Pierre
Rizk, Guillaume
Lavenier, Dominique
Wu, Yu-Wei
Singer, Steven W
Jain, Chirag
Strous, Marc
Klingenberg, Heiner
Meinicke, Peter
Barton, Michael D
Lingner, Thomas
Lin, Hsin-Hung
Liao, Yu-Chieh
Silva, Genivaldo Gueiros Z
Cuevas, Daniel A
Edwards, Robert A
Saha, Surya
Piro, Vitor C
Renard, Bernhard Y
Pop, Mihai
Klenk, Hans-Peter
Göker, Markus
Kyrpides, Nikos C
Woyke, Tanja
Vorholt, Julia A
Schulze-Lefert, Paul
Rubin, Edward M
Darling, Aaron E
Rattei, Thomas
McHardy, Alice C
Identifiers
Primary Identifiers
Record Identifier
TN_cdi_osti_scitechconnect_1543734
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_osti_scitechconnect_1543734
Other Identifiers
ISSN
1548-7091
E-ISSN
1548-7105
DOI
10.1038/nmeth.4458
