SNPpy--database management for SNP data from genome wide association studies
SNPpy--database management for SNP data from genome wide association studies
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Publisher
United States: Public Library of Science
Journal title
Language
English
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Publisher
United States: Public Library of Science
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Scope and Contents
Contents
We describe SNPpy, a hybrid script database system using the Python SQLAlchemy library coupled with the PostgreSQL database to manage genotype data from Genome-Wide Association Studies (GWAS). This system makes it possible to merge study data with HapMap data and merge across studies for meta-analyses, including data filtering based on the values o...
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Full title
SNPpy--database management for SNP data from genome wide association studies
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TN_cdi_plos_journals_1310269087
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_plos_journals_1310269087
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ISSN
1932-6203
E-ISSN
1932-6203
DOI
10.1371/journal.pone.0024982
