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Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome

Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_2115902439

Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome

About this item

Full title

Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome

Publisher

Cold Spring Harbor: Cold Spring Harbor Laboratory Press

Journal title

bioRxiv, 2018-10

Language

English

Formats

Publication information

Publisher

Cold Spring Harbor: Cold Spring Harbor Laboratory Press

Subjects

Subjects and topics

More information

Scope and Contents

Contents

We sequenced the Yoruban NA19240 genome on the Oxford Nanopore PromethION for benchmarking and evaluation of recently published aligners and structural variant calling tools. In this work, we determined the precision and recall, present high confidence and high sensitivity call sets of variants and discuss optimal parameters. The aligner Minimap2 a...

Alternative Titles

Full title

Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_proquest_journals_2115902439

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_2115902439

Other Identifiers

E-ISSN

2692-8205

DOI

10.1101/434118