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ArticlesPeer ReviewedFull Text
NanoSatellite: accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION
Author / Creator:De Roeck, Arne ; De Coster, Wouter ; Bossaerts, Liene ; Cacace, Rita ; De Pooter, Tim ; Van Dongen, Jasper ; D’Hert, Svenn ; De Rijk, Peter ; Strazisar, Mojca ; Van Broeckhoven, Christine ; Sleegers, Kristel
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2019-11, Vol.20 (1), p.239-239, Article 239
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Scarless excision of an insertion sequence restores capsule production and virulence in Acinetobacter baumannii
Author / Creator:Whiteway, Clémence ; Valcek, Adam ; Philippe, Chantal ; Strazisar, Mojca ; De Pooter, Tim ; Mateus, Ivan ; Breine, Anke ; Van der Henst, Charles
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2022-05, Vol.16 (5), p.1473-1477
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Full characterization of unresolved structural variation through long-read sequencing and optical genome mapping
Author / Creator:De Clercq, Griet ; Vantomme, Lies ; Dewaele, Barbara ; Callewaert, Bert ; Vanakker, Olivier ; Janssens, Sandra ; Loeys, Bart ; Strazisar, Mojca ; De Coster, Wouter ; Vermeesch, Joris Robert ; Dheedene, Annelies ; Menten, Björn
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2024-11, Vol.14 (1), p.29142-12, Article 29142
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Rare variants in IFFO1, DTNB, NLRC3 and SLC22A10 associate with Alzheimer’s disease CSF profile of neuronal injury and inflammation
Author / Creator:Neumann, Alexander ; Küçükali, Fahri ; Bos, Isabelle ; Vos, Stephanie J. B. ; Engelborghs, Sebastiaan ; De Pooter, Tim ; Joris, Geert ; De Rijk, Peter ; De Roeck, Ellen ; Tsolaki, Magda ; Verhey, Frans ; Martinez-Lage, Pablo ; Tainta, Mikel ; Frisoni, Giovanni ; Blin, Oliver ; Richardson, Jill ; Bordet, Régis ; Scheltens, Philip ; Popp, Julius ; Peyratout, Gwendoline ; Johannsen, Peter ; Frölich, Lutz ; Vandenberghe, Rik ; Freund-Levi, Yvonne ; Streffer, Johannes ; Lovestone, Simon ; Legido-Quigley, Cristina ; ten Kate, Mara ; Barkhof, Frederik ; Strazisar, Mojca ; Zetterberg, Henrik ; Bertram, Lars ; Visser, Pieter Jelle ; van Broeckhoven, Christine ; Sleegers, Kristel
Publisher:London: Nature Publishing Group UK
Journal title:Molecular psychiatry, 2022-04, Vol.27 (4), p.1990-1999
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Schizophrenia-Associated MIR204 Regulates Noncoding RNAs and Affects Neurotransmitter and Ion Channel Gene Sets
Author / Creator:Cammaerts, Sophia ; Strazisar, Mojca ; Smets, Bart ; Weckhuysen, Sarah ; Nordin, Annelie ; De Jonghe, Peter ; Adolfsson, Rolf ; De Rijk, Peter ; Del Favero, Jurgen
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-12, Vol.10 (12), p.e0144428-e0144428
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Critical length in long-read resequencing
Author / Creator:De Coster, Wouter ; Strazisar, Mojca ; De Rijk, Peter
Publisher:England: Oxford University Press
Journal title:NAR genomics and bioinformatics, 2020-03, Vol.2 (1), p.lqz027
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Deciphering a Single‐cell atlas and loss‐of‐function analysis revealing ABCA7’s transcriptome insights in Alzheimer’s disease
Author / Creator:De Deyn, Lara ; Duchateau, Lena ; Watzeels, Tijs ; Vicente, Cristina ; Van Dongen, Jasper ; Bijnens, Baukje ; De Pooter, Tim ; De Rijk, Peter ; Strazisar, Mojca ; Vandenberghe, Wim ; Thal, Dietmar Rudolf ; Mancuso, Renzo ; Rademakers, Rosa ; Küçükali, Fahri ; Sleegers, Kristel
Publisher:Hoboken: John Wiley and Sons Inc
Journal title:Alzheimer's & dementia, 2025-01, Vol.20 (Suppl 1), p.n/a
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Basic Science and Pathogenesis
Author / Creator:De Deyn, Lara ; Duchateau, Lena ; Watzeels, Tijs ; Vicente, Cristina ; Van Dongen, Jasper ; Bijnens, Baukje ; De Pooter, Tim ; De Rijk, Peter ; Strazisar, Mojca ; Vandenberghe, Wim ; Thal, Dietmar Rudolf ; Mancuso, Renzo ; Rademakers, Rosa ; Küçükali, Fahri ; Sleegers, Kristel
Publisher:United States
Journal title:Alzheimer's & dementia, 2024-12, Vol.20 Suppl 1, p.e092265
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Deciphering a Single‐cell atlas and loss‐of‐function analysis revealing ABCA7 ’s transcriptome insights in Alzheimer’s disease
Author / Creator:De Deyn, Lara ; Duchateau, Lena ; Watzeels, Tijs ; Vicente, Cristina ; Van Dongen, Jasper ; Bijnens, Baukje ; De Pooter, Tim ; De Rijk, Peter ; Strazisar, Mojca ; Vandenberghe, Wim ; Thal, Dietmar Rudolf ; Mancuso, Renzo ; Rademakers, Rosa ; Küçükali, Fahri ; Sleegers, Kristel
Journal title:Alzheimer's & dementia, 2024-12, Vol.20 (S1)
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Mitochondrial GpC and CpG DNA Hypermethylation Cause Metabolic Stress-Induced Mitophagy and Cholestophagy
Author / Creator:Theys, Claudia ; Ibrahim, Joe ; Mateiu, Ligia ; Mposhi, Archibold ; García-Pupo, Laura ; De Pooter, Tim ; De Rijk, Peter ; Strazisar, Mojca ; İnce, İkbal Agah ; Vintea, Iuliana ; Rots, Marianne G. ; Vanden Berghe, Wim
Publisher:Basel: MDPI AG
Journal title:International journal of molecular sciences, 2023-11, Vol.24 (22), p.16412
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ArticlesFull Text
Critical length in long read resequencing
Author / Creator:De Coster, Wouter ; Strazisar, Mojca ; De Rijk, Peter
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2019-04
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Loss of DPP6 in neurodegenerative dementia: a genetic player in the dysfunction of neuronal excitability
Author / Creator:Cacace, Rita ; Heeman, Bavo ; Van Mossevelde, Sara ; De Roeck, Arne ; Hoogmartens, Julie ; De Rijk, Peter ; Gossye, Helena ; De Vos, Kristof ; De Coster, Wouter ; Strazisar, Mojca ; De Baets, Greet ; Schymkowitz, Joost ; Rousseau, Frederic ; Geerts, Nathalie ; De Pooter, Tim ; Peeters, Karin ; Sieben, Anne ; Martin, Jean-Jacques ; Engelborghs, Sebastiaan ; Salmon, Eric ; Santens, Patrick ; Vandenberghe, Rik ; Cras, Patrick ; P. De Deyn, Peter ; C. van Swieten, John ; M. van Duijn, Cornelia ; van der Zee, Julie ; Sleegers, Kristel ; Van Broeckhoven, Christine
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Acta neuropathologica, 2019-06, Vol.137 (6), p.901-918
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The expression of COX-2, hTERT, MDM2, LATS2 and S100A2 in different types of non-small cell lung cancer (NSCLC)
Author / Creator:Stražišar, Mojca ; Mlakar, Vid ; Glavač, Damjan
Publisher:England: Versita
Journal title:Cellular & molecular biology letters, 2009-09, Vol.14 (3), p.442-456
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Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome
Author / Creator:De Coster, Wouter ; De Roeck, Arne ; De Pooter, Tim ; D'hert, Svenn ; De Rijk, Peter ; Strazisar, Mojca ; Sleegers, Kristel ; Christine Van Broeckhoven
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-10
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ArticlesFull Text
Accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION
Author / Creator:De Roeck, Arne ; De Coster, Wouter ; Bossaerts, Liene ; Cacace, Rita ; De Pooter, Tim ; Jasper Van Dongen ; D'hert, Svenn ; De Rijk, Peter ; Strazisar, Mojca ; Christine Van Broeckhoven ; Sleegers, Kristel
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-11
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Less Cognitive and Neurological Deficits in Schizophrenia Patients Carrying Risk Variant in ZNF804A
Author / Creator:Van Den Bossche, Maarten J.A. ; Docx, Lise ; Morrens, Manuel ; Cammaerts, Sophia ; Strazisar, Mojca ; Bervoets, Chris ; Smolders, Stefanie ; Depreeuw, Veerle ; Lenaerts, An-Sofie ; De Rijk, Peter ; Del-Favero, Jurgen ; Sabbe, Bernard G.C.
Publisher:Basel, Switzerland: S. Karger AG
Journal title:Neuropsychobiology, 2012-01, Vol.66 (3), p.158-166
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Schizophrenia-Associated MIR204 Regulates Noncoding RNAs and Affects Neurotransmitter and Ion Channel Gene Sets: e0144428
Author / Creator:Cammaerts, Sophia ; Strazisar, Mojca ; Smets, Bart ; Weckhuysen, Sarah ; Nordin, Annelie ; Jonghe, Peter De ; Adolfsson, Rolf ; Rijk, Peter De ; Favero, Jurgen Del
Journal title:PloS one, 2015-12, Vol.10 (12)
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Methplotlib: analysis of modified nucleotides from nanopore sequencing
Author / Creator:De Coster, Wouter ; Strazisar, Mojca
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2019-11
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opentsv prevents the corruption of scientific data by Excel
Author / Creator:De Rijk, Peter ; D'hert, Svenn ; Strazisar, Mojca
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2019-05
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Methylmap: visualization of modified nucleotides for large cohort sizes
Author / Creator:Coopman, Elise ; Marleen Van Den Broeck ; De Pooter, Tim ; Joris, Geert ; Dickson, Dennis W ; Strazisar, Mojca ; Rademakers, Rosa ; De Coster, Wouter
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-11
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Showing 1 to 20 of 23 results

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NanoSatellite: accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION

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Scarless excision of an insertion sequence restores capsule production and virulence in Acinetobacter baumannii

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Full characterization of unresolved structural variation through long-read sequencing and optical genome mapping

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Rare variants in IFFO1, DTNB, NLRC3 and SLC22A10 associate with Alzheimer’s disease CSF profile of neuronal injury and inflammation

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Schizophrenia-Associated MIR204 Regulates Noncoding RNAs and Affects Neurotransmitter and Ion Channel Gene Sets

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Critical length in long-read resequencing

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Deciphering a Single‐cell atlas and loss‐of‐function analysis revealing ABCA7’s transcriptome insights in Alzheimer’s disease

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Basic Science and Pathogenesis

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Deciphering a Single‐cell atlas and loss‐of‐function analysis revealing ABCA7 ’s transcriptome insights in Alzheimer’s disease

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Mitochondrial GpC and CpG DNA Hypermethylation Cause Metabolic Stress-Induced Mitophagy and Cholestophagy

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Critical length in long read resequencing

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Loss of DPP6 in neurodegenerative dementia: a genetic player in the dysfunction of neuronal excitability

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The expression of COX-2, hTERT, MDM2, LATS2 and S100A2 in different types of non-small cell lung cancer (NSCLC)

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Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome

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Accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION

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Less Cognitive and Neurological Deficits in Schizophrenia Patients Carrying Risk Variant in ZNF804A

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Schizophrenia-Associated MIR204 Regulates Noncoding RNAs and Affects Neurotransmitter and Ion Channel Gene Sets: e0144428

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Methplotlib: analysis of modified nucleotides from nanopore sequencing

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opentsv prevents the corruption of scientific data by Excel

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Methylmap: visualization of modified nucleotides for large cohort sizes

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