ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud
ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud
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Cold Spring Harbor: Cold Spring Harbor Laboratory Press
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Language
English
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Cold Spring Harbor: Cold Spring Harbor Laboratory Press
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Contents
Reliable deep learning segmentation for microfluidic live-cell imaging requires comprehensive ground truth data. ObiWan-Microbi is a microservice platform combining the strength of state-of-the-art technologies into a unique integrated workflow for data management and efficient ground truth generation for instance segmentation, empowering collaborative semi-automated image annotation in the cloud. Availability and Implementation: ObiWan-Microbi is open-source and available under the MIT license at https://github.com/hip-satomi/ObiWan-Microbi, along documentation and usage examples. Contact: k.noeh@fz-juelich.de Supplementary information: Supplementary data are available online. Competing Interest Statement The authors have declared no competing interest....
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Full title
ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud
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TN_cdi_proquest_journals_2696968020
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https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_2696968020
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E-ISSN
2692-8205
DOI
10.1101/2022.08.01.502297
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https://www.proquest.com/docview/2696968020?pq-origsite=primo&accountid=13902
