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Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold

Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_miscellaneous_2246908008

Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold

About this item

Full title

Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold

Publisher

New York: Nature Publishing Group US

Journal title

Nature methods, 2019-07, Vol.16 (7), p.603-606

Language

English

Formats

Publication information

Publisher

New York: Nature Publishing Group US

More information

Scope and Contents

Contents

The open-source de novo protein-level assembler, Plass (
https://plass.mmseqs.com
), assembles six-frame-translated sequencing reads into protein sequences. It recovers 2–10 times more protein sequences from complex metagenomes and can assemble huge datasets. We assembled two redundancy-f...

Alternative Titles

Full title

Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_proquest_miscellaneous_2246908008

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_miscellaneous_2246908008

Other Identifiers

ISSN

1548-7091

E-ISSN

1548-7105

DOI

10.1038/s41592-019-0437-4

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