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SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10482700

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

About this item

Full title

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

Publisher

New York: Nature Publishing Group US

Journal title

Nature methods, 2023-09, Vol.20 (9), p.1355-1367

Language

English

Formats

Publication information

Publisher

New York: Nature Publishing Group US

More information

Scope and Contents

Contents

Joint profiling of chromatin accessibility and gene expression in individual cells provides an opportunity to decipher enhancer-driven gene regulatory networks (GRNs). Here we present a method for the inference of enhancer-driven GRNs, called SCENIC+. SCENIC+ predicts genomic enhancers along with candidate upstream transcription factors (TFs) and l...

Alternative Titles

Full title

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10482700

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10482700

Other Identifiers

ISSN

1548-7091

E-ISSN

1548-7105

DOI

10.1038/s41592-023-01938-4

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