Benchmarking microbial growth rate predictions from metagenomes
Benchmarking microbial growth rate predictions from metagenomes
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Publisher
London: Nature Publishing Group UK
Journal title
Language
English
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Publisher
London: Nature Publishing Group UK
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Scope and Contents
Contents
Growth rates are central to understanding microbial interactions and community dynamics. Metagenomic growth estimators have been developed, specifically codon usage bias (CUB) for maximum growth rates and “peak-to-trough ratio” (PTR) for in situ rates. Both were originally tested with pure cultures, but natural populations are more heterogeneous, e...
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Full title
Benchmarking microbial growth rate predictions from metagenomes
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TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7852909
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7852909
Other Identifiers
ISSN
1751-7362
E-ISSN
1751-7370
DOI
10.1038/s41396-020-00773-1
