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MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

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MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8916956

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

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New York: Nature Publishing Group US

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Contents

Highly multiplexed tissue imaging makes detailed molecular analysis of single cells possible in a preserved spatial context. However, reproducible analysis of large multichannel images poses a substantial computational challenge. Here, we describe a modular and open-source computational pipeline, MCMICRO, for performing the sequential steps needed...

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Full title

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

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Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8916956

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8916956

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ISSN

1548-7091,1548-7105

E-ISSN

1548-7105

DOI

10.1038/s41592-021-01308-y

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