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ArticlesPeer ReviewedFull Text
Structural and functional evidence of bacterial antiphage protection by Thoeris defense system via NAD+ degradation
Author / Creator:Ka, Donghyun ; Oh, Hyejin ; Park, Eunyoung ; Kim, Jeong-Han ; Bae, Euiyoung
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2020-06, Vol.11 (1), p.2816-2816, Article 2816
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Enzyme intermediates captured “on the fly” by mix-and-inject serial crystallography
Author / Creator:Olmos, Jose L. ; Pandey, Suraj ; Martin-Garcia, Jose M. ; Calvey, George ; Katz, Andrea ; Knoska, Juraj ; Kupitz, Christopher ; Hunter, Mark S. ; Liang, Mengning ; Oberthuer, Dominik ; Yefanov, Oleksandr ; Wiedorn, Max ; Heyman, Michael ; Holl, Mark ; Pande, Kanupriya ; Barty, Anton ; Miller, Mitchell D. ; Stern, Stephan ; Roy-Chowdhury, Shatabdi ; Coe, Jesse ; Nagaratnam, Nirupa ; Zook, James ; Verburgt, Jacob ; Norwood, Tyler ; Poudyal, Ishwor ; Xu, David ; Koglin, Jason ; Seaberg, Matthew H. ; Zhao, Yun ; Bajt, Saša ; Grant, Thomas ; Mariani, Valerio ; Nelson, Garrett ; Subramanian, Ganesh ; Bae, Euiyoung ; Fromme, Raimund ; Fung, Russell ; Schwander, Peter ; Frank, Matthias ; White, Thomas A. ; Weierstall, Uwe ; Zatsepin, Nadia ; Spence, John ; Fromme, Petra ; Chapman, Henry N. ; Pollack, Lois ; Tremblay, Lee ; Ourmazd, Abbas ; Phillips, George N. ; Schmidt, Marius
Publisher:England: BioMed Central Ltd
Journal title:BMC biology, 2018-05, Vol.16 (1), p.59-59, Article 59
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Solution structure and dynamics of anti-CRISPR AcrIIA4, the Cas9 inhibitor
Author / Creator:Kim, Iktae ; Jeong, Migyeong ; Ka, Donghyun ; Han, Mookyoung ; Kim, Nak-Kyoon ; Bae, Euiyoung ; Suh, Jeong-Yong
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2018-03, Vol.8 (1), p.3883-9, Article 3883
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Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability
Author / Creator:Moon, Sojin ; Kim, Junhyung ; Koo, Jasung ; Bae, Euiyoung
Publisher:United States: American Institute of Physics, Inc
Journal title:Structural dynamics (Melville, N.Y.), 2019-03, Vol.6 (2), p.024702-024702
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Biochemical characterization of type I-E anti-CRISPR proteins, AcrIE2 and AcrIE4
Author / Creator:Koo, Jasung ; Lee, Gyujin ; Ka, Donghyun ; Park, Changkon ; Suh, Jeong-Yong ; Bae, Euiyoung
Publisher:Singapore: Springer Nature Singapore
Journal title:Applied Biological Chemistry, 2023, 66(0), , pp.1-9
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Conformational dynamics of adenylate kinase in crystals
Author / Creator:Kim, Junhyung ; Moon, Sojin ; Romo, Tod D. ; Yang, Yifei ; Bae, Euiyoung ; Phillips, George N.
Publisher:United States: American Institute of Physics, Inc
Journal title:Structural dynamics (Melville, N.Y.), 2024-01, Vol.11 (1), p.014702-014702-12
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Crystal Structure of Streptococcus pyogenes Csn2 Reveals Calcium-Dependent Conformational Changes in Its Tertiary and Quaternary Structure
Author / Creator:Koo, Yoon ; Jung, Du-kyo ; Bae, Euiyoung
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-03, Vol.7 (3), p.e33401-e33401
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Structural and dynamic insights into the role of conformational switching in the nuclease activity of the Xanthomonas albilineans Cas2 in CRISPR-mediated adaptive immunity
Author / Creator:Ka, Donghyun ; Hong, Suji ; Jeong, Ugeene ; Jeong, Migyeong ; Suh, Nayoung ; Suh, Jeong-Yong ; Bae, Euiyoung
Publisher:United States: American Institute of Physics, Inc
Journal title:Structural dynamics (Melville, N.Y.), 2017-09, Vol.4 (5), p.054701-054701
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Roles of Static and Dynamic Domains in Stability and Catalysis of Adenylate Kinase
Author / Creator:Bae, Euiyoung ; Phillips, George N.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2006-02, Vol.103 (7), p.2132-2137
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Structure and Stability of the Dimeric Triosephosphate Isomerase from the Thermophilic Archaeon Thermoplasma acidophilum
Author / Creator:Park, Sang Ho ; Kim, Hyoun Sook ; Park, Mi Seul ; Moon, Sojin ; Song, Mi Kyung ; Park, Han Su ; Hahn, Hyunggu ; Kim, Soon-Jong ; Bae, Euiyoung ; Kim, Hyun-Jung ; Han, Byung Woo
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-12, Vol.10 (12), p.e0145331-e0145331
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Bioinformatic method for protein thermal stabilization by structural entropy optimization
Author / Creator:Bae, Euiyoung ; Bannen, Ryan M ; Phillips, George N. Jr
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2008-07, Vol.105 (28), p.9594-9597
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Crystal structures of thermally stable adenylate kinase mutants designed by local structural entropy optimization and structure-guided mutagenesis
Author / Creator:Moon Sojin ; Bae Euiyoung
Publisher:Heidelberg: Springer Nature B.V
Journal title:Applied Biological Chemistry, 2014, 57(5), , pp.661-665
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Molecular dynamics simulation of a psychrophilic adenylate kinase
Author / Creator:Bae Euiyoung ; Moon Sojin ; Phillips, George N
Publisher:Heidelberg: Springer Nature B.V
Journal title:Applied Biological Chemistry, 2015, 58(2), , pp.209-212
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Crystal structure of a putative histidine-containing phosphotransfer protein from Oryza sativa
Author / Creator:Bae Euiyoung ; Bitto Eduard ; Bingman, Craig A ; Allard, Simon T ; Wesenberg, Gary E ; Wrobel, Russell L ; Fox, Brian G ; Phillips, George N
Publisher:Heidelberg: Springer Nature B.V
Journal title:Applied Biological Chemistry, 2010, 53(6), , pp.852-856
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Structural analyses of adenylate kinases from Antarctic and tropical fishes for understanding cold adaptation of enzymes
Author / Creator:Moon, Sojin ; Kim, Junhyung ; Bae, Euiyoung
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-11, Vol.7 (1), p.16027-12, Article 16027
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Structures of proteins of biomedical interest from the Center for Eukaryotic Structural Genomics
Author / Creator:Phillips, George N. ; Fox, Brian G. ; Markley, John L. ; Volkman, Brian F. ; Bae, Euiyoung ; Bitto, Eduard ; Bingman, Craig A. ; Frederick, Ronnie O. ; McCoy, Jason G. ; Lytle, Betsy L. ; Pierce, Brad S. ; Song, Jikui ; Twigger, Simon N.
Publisher:Netherlands: Springer Nature B.V
Journal title:Journal of structural and functional genomics, 2007-09, Vol.8 (2-3), p.73-84
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Enzyme intermediates captured “on the fly” by mix-and-inject serial crystallography
Author / Creator:Olmos, Jose L. ; Pandey, Suraj ; Martin-Garcia, Jose M. ; Calvey, George ; Katz, Andrea ; Knoska, Juraj ; Kupitz, Christopher ; Hunter, Mark S. ; Liang, Mengning ; Oberthuer, Dominik ; Yefanov, Oleksandr ; Wiedorn, Max ; Heyman, Michael ; Holl, Mark ; Pande, Kanupriya ; Barty, Anton ; Miller, Mitchell D. ; Stern, Stephan ; Roy-Chowdhury, Shatabdi ; Coe, Jesse ; Nagaratnam, Nirupa ; Zook, James ; Verburgt, Jacob ; Norwood, Tyler ; Poudyal, Ishwor ; Xu, David ; Koglin, Jason ; Seaberg, Matthew H. ; Zhao, Yun ; Bajt, Sasa ; Grant, Thomas ; Mariani, Valerio ; Nelson, Garrett ; Subramanian, Ganesh ; Bae, Euiyoung ; Fromme, Raimund ; Fung, Russell ; Schwander, Peter ; Frank, Matthias ; White, Thomas A. ; Weierstall, Uwe ; Zatsepin, Nadia ; Spence, John ; Fromme, Petra ; Chapman, Henry N. ; Pollack, Lois ; Tremblay, Lee ; Ourmazd, Abbas ; Phillips, George N. ; Schmidt, Marius
Publisher:United States: BioMed Central
Journal title:BMC biology, 2018-05, Vol.16 (1)
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Enzyme Intermediates Captured "on-the-fly" by Mix-and-Inject Serial Crystallography
Author / Creator:Olmos, Jose ; Pandey, Suraj ; Martin-Garcia, Jose M ; Calvey, George ; Katz, Andrea ; Knoska, Juray ; Kupitz, Christopher ; Hunter, Mark S ; Liang, Mengning ; Oberthuer, Dominik ; Yefanov, Oleksandr ; Wiedorn, Max ; Heymann, Michael ; Holl, Mark ; Pande, Kanupriya ; Barty, Anton ; Miller, Mitchell D ; Stern, Stephan ; Roy-Chowdhury, Shatabdi ; Coe, Jesse D ; Nagaratnam, Nirupa ; Zook, James ; Verburgt, Jacob ; Norwood, Tyler ; Poudyal, Ishwor ; Xu, David ; Koglin, Jason ; Seaberg, Matt ; Zhao, Yun ; Bajt, Sasa ; Grant, Thomas ; Mariani, Valerio ; Nelson, Garrett ; Subramanian, Ganesh ; Bae, Euiyoung ; Fromme, Raimund ; Fung, Russel ; Schwander, Peter ; Frank, Matthias ; White, Thomas ; Weierstall, Uwe ; Zatsepin, Nadia ; Spence, John ; Fromme, Petra ; Chapman, Henry N ; Pollack, Lois ; Tremblay, Lee ; Ourmazd, Abbas ; Phillips, George N ; Schmidt, Marius
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-01
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Structural and functional evidence of bacterial antiphage protection by Thoeris defense system via NAD+ degradation

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Enzyme intermediates captured “on the fly” by mix-and-inject serial crystallography

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Solution structure and dynamics of anti-CRISPR AcrIIA4, the Cas9 inhibitor

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Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability

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Biochemical characterization of type I-E anti-CRISPR proteins, AcrIE2 and AcrIE4

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Conformational dynamics of adenylate kinase in crystals

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Crystal Structure of Streptococcus pyogenes Csn2 Reveals Calcium-Dependent Conformational Changes in Its Tertiary and Quaternary Structure

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Structural and dynamic insights into the role of conformational switching in the nuclease activity of the Xanthomonas albilineans Cas2 in CRISPR-mediated adaptive immunity

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Roles of Static and Dynamic Domains in Stability and Catalysis of Adenylate Kinase

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Structure and Stability of the Dimeric Triosephosphate Isomerase from the Thermophilic Archaeon Thermoplasma acidophilum

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Bioinformatic method for protein thermal stabilization by structural entropy optimization

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Crystal structures of thermally stable adenylate kinase mutants designed by local structural entropy optimization and structure-guided mutagenesis

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Molecular dynamics simulation of a psychrophilic adenylate kinase

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Crystal structure of a putative histidine-containing phosphotransfer protein from Oryza sativa

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Structural analyses of adenylate kinases from Antarctic and tropical fishes for understanding cold adaptation of enzymes

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Structures of proteins of biomedical interest from the Center for Eukaryotic Structural Genomics

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Enzyme intermediates captured “on the fly” by mix-and-inject serial crystallography

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Enzyme Intermediates Captured "on-the-fly" by Mix-and-Inject Serial Crystallography

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