Search the collection

Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 1
ArticlesPeer ReviewedFull Text
A glycan gate controls opening of the SARS-CoV-2 spike protein
Author / Creator:Sztain, Terra ; Ahn, Surl-Hee ; Bogetti, Anthony T. ; Casalino, Lorenzo ; Goldsmith, Jory A. ; Seitz, Evan ; McCool, Ryan S. ; Kearns, Fiona L. ; Acosta-Reyes, Francisco ; Maji, Suvrajit ; Mashayekhi, Ghoncheh ; McCammon, J. Andrew ; Ourmazd, Abbas ; Frank, Joachim ; McLellan, Jason S. ; Chong, Lillian T. ; Amaro, Rommie E.
Publisher:London: Nature Publishing Group UK
Journal title:Nature chemistry, 2021-10, Vol.13 (10), p.963-968
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 2
ArticlesPeer ReviewedFull Text
Large enhancement of response times of a protein conformational switch by computational design
Author / Creator:DeGrave, Alex J. ; Ha, Jeung-Hoi ; Loh, Stewart N. ; Chong, Lillian T.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2018-03, Vol.9 (1), p.1013-9, Article 1013
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 3
Reference EntriesFull Text
Chong, Lillian
Journal title:American Men & Women of Science : A Biographical Directory of Today’s Leaders in Physical, Biological and Related Sciences: BUR-CON, 2022, p.2052-2052
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 4
Reference EntriesFull Text
Chong, Lillian
Journal title:American Men & Women of Science : A Biographical Directory of Today’s Leaders in Physical, Biological and Related Sciences: BUP-CON, 2021, p.2040-2040
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 5
ArticlesPeer ReviewedFull Text
Molecular Dynamics and Free-Energy Calculations Applied to Affinity Maturation in Antibody 48G7
Author / Creator:Chong, Lillian T. ; Duan, Yong ; Wang, Lu ; Massova, Irina ; Kollman, Peter A.
Publisher:United States: National Academy of Sciences of the United States of America
Journal title:Proceedings of the National Academy of Sciences - PNAS, 1999-12, Vol.96 (25), p.14330-14335
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 6
ArticlesFull Text
A glycan gate controls opening of the SARS-CoV-2 spike protein
Author / Creator:Sztain, Terra ; Ahn, Surl-Hee ; Bogetti, Anthony T ; Casalino, Lorenzo ; Goldsmith, Jory A ; Mccool, Ryan S ; Kearns, Fiona L ; Mccammon, J Andrew ; Mclellan, Jason S ; Chong, Lillian T ; Amaro, Rommie E
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-05
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 7
ArticlesFull Text
SHINE: Deterministic Many-to-Many clustering of Molecular Pathways
Author / Creator:Chen, Lexin ; Leung, Jeremy ; Zsigmond, Krisztina ; Chong, Lillian ; Ramon Alain Miranda Quintana
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2025-02
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 8
ArticlesFull Text
Identification of Small Molecule Ligand Binding Sites On and In the ARNT PAS-B Domain
Author / Creator:Xu, Xingjian ; Leandro Pimentel Marcelino ; Favaro, Denize C ; Silvestrini, Marion L ; Solazzo, Riccardo ; Chong, Lillian T ; Gardner, Kevin H
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2024-06
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 9
ArticlesFull Text
The RED scheme: Rate-constant estimation from pre-steady state weighted ensemble simulations
Author / Creator:Degrave, Alex J ; Bogetti, Anthony T ; Chong, Lillian T
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-12
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 10
ArticlesFull Text
A Minimal, Adaptive Binning Scheme for Weighted Ensemble Simulations
Author / Creator:Torrillo, Paul A ; Bogetti, Anthony T ; Chong, Lillian T
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-12
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 11
ArticlesFull Text
Extensive Evaluation of Weighted Ensemble Strategies for Calculating Rate Constants and Binding Affinities of Molecular Association/Dissociation Processes
Author / Creator:Pratt, Aj ; Suarez, Ernesto ; Zuckerman, Daniel ; Chong, Lillian
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2019-06
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 12
ArticlesFull Text
Development and Validation of Fluorinated Amino Acid Parameters for use with the AMBER ff15ipq Protein Force Field
Author / Creator:Yang, Darian ; Gronenborn, Angela ; Chong, Lillian
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-01
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 13
ArticlesFull Text
Protein-protein binding pathways and calculations of rate constants using fully continuous explicit solvent simulations
Author / Creator:Saglam, Ali ; Chong, Lillian
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2018-10
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 14
Book ChaptersFull Text
A Glycan Gate Controls Opening of the SARS-CoV-2 Spike Protein
Author / Creator:Sztain, Terra ; Ahn, Surl-Hee ; Bogetti, Anthony T. ; Casalino, Lorenzo ; Goldsmith, Jory A. ; Seitz, Evan ; McCool, Ryan S. ; Kearns, Fiona L. ; Acosta-Reyes, Francisco ; Maji, Suvrajit ; Mashayekhi, Ghoncheh ; McCammon, J. Andrew ; Ourmazd, Abbas ; Frank, Joachim ; McLellan, Jason S. ; Chong, Lillian T. ; Amaro, Rommie E.
Publisher:Jenny Stanford Publishing
Journal title:Novel Developments in Cryo-EM of Biological Molecules, 2024, Vol.1, p.241-256
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 15
ArticlesFull Text
The need to implement FAIR principles in biomolecular simulations
Author / Creator:Åqvist, Johan ; Bahar, Ivet ; Battistini, Federica ; Bellaiche, Adam ; Beltran, Daniel ; Biggin, Philip C ; Bonomi, Massimiliano ; Bowman, Gregory R ; Bryce, Richard ; Bussi, Giovanni ; Case, David ; Cavalli, Andrea ; Cheung, Margaret S ; Chipot, Cris ; Choudhary, Preeti ; Clementi, Cecilia ; Collepardo-Guevara, Rosana ; Coveney, Peter ; Covino, Roberto ; Crawford, T Daniel ; Matteo Dal Peraro ; de Groot, Bert ; Delemotte, Lucie ; De Vivo, Marco ; Essex, Jonathan ; Fraternali, Franca ; Gao, Jiali ; Gelpí, Josep Lluís ; Gervasio, Francesco Luigi ; Gonzalez-Nilo, Fernando Danilo ; Harris, Sarah ; Head-Gordon, Teresa ; Hernandez, Rigoberto ; Hospital, Adam ; Huang, Niu ; Huang, Xuhui ; Iglesias-Fernández, Javier ; Jensen, Jan H ; Jha, Shantenu ; Jiao, Wanting ; Jorgensen, William L ; Shina Caroline Lynn Kamerlin ; Syma Khalid ; Laughton, Charles ; Levitt, Michael ; Limongelli, Vittorio ; Loverde, Sharon ; Yun Lyna Luo ; Luque, Francisco Javier ; MacKerell, Alexander ; Magistrato, Alessandra ; Marrink, Siewert J ; McCammon, J Andrew ; Merz, Kenneth ; Moliner, Vicent ; Murad, Sohail ; Naganathan, Athi N ; Nangia, Shikha ; Noy, Agnes ; Oláh, Julianna ; Ondrechen, Mary Jo ; Onuchic, José N ; Onufriev, Alexey ; Osuna, Silvia ; Parish, Carol ; Perez, Alberto ; B Montgomery Pettitt ; Pietropalo, Adriana ; Jean-Philip Piquemal ; Poma, Adolfo ; Praprotnik, Matej ; Ren, Pengyu ; Reuter, Nathalie ; Roitberg, Adrian ; Rosta, Edina ; Rovira, Carme ; Roux, Benoit ; Röthlisberger, Ursula ; Sanbonmatsu, Karissa Y ; Schlick, Tamar ; Shaytan, Alexey K ; Simmerling, Carlos ; Smith, Jeremy C ; Sugita, Yuji ; Świderek, Katarzyna ; Taiji, Makoto ; Peng, Tao ; Tikhonova, Irina G ; Tirado-Rives, Julian ; Marc W Van Der Kamp ; Van der Spoel, David ; Velankar, Sameer ; Voth, Gregory A ; Wade, Rebecca ; Warshel, Ariel ; Welborn, Valerie Vaissier ; Wetmore, Stacey ; Wong, Chung F ; Lee-Wei, Yang ; Zacharias, Martin
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2024-08
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 16
ArticlesFull Text
Structure-Based Experimental Datasets for Benchmarking of Protein Simulation Force Fields
Author / Creator:Cavender, Chapin E ; Case, David A ; Chen, Julian C -H ; Chong, Lillian T ; Keedy, Daniel A ; Lindorff-Larsen, Kresten ; Mobley, David L ; O H Samuli Ollila ; Oostenbrink, Chris ; Robustelli, Paul ; Voelz, Vincent A ; Wall, Michael E ; Wych, David C ; Gilson, Michael K
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2023-03
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 17
ArticlesFull Text
A Suite of Advanced Tutorials for the WESTPA 2.0 Rare-Events Sampling Software
Author / Creator:Bogetti, Anthony ; Leung, Jeremy ; Russo, John ; Zhang, She ; Thompson, Jeff ; Saglam, Ali ; Dhiman, Ray ; Abraham, Rhea ; Faeder, James ; Andricioaei, Ioan ; Adelman, Joshua ; Zwier, Matthew ; Lebard, David ; Zuckerman, Daniel M ; Chong, Lillian
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-10
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.
Export this record
Export to excel
Print
Export record to excel
File type to download
Beta version
Select record 18
ArticlesFull Text
Simultaneous computation of dynamical and equilibrium information using a weighted ensemble of trajectories
Author / Creator:Suarez, Ernesto ; Lettieri, Steven ; Zwier, Matthew C ; Stringer, Carsen A ; Sundar Raman Subramanian ; Chong, Lillian T ; Zuckerman, Daniel M
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2014-07
View online as a Library member
Access ebook if you are in the Library. Registered NSW residents may log in from home.

Export record to excel

Export this record

Export record to excel

A glycan gate controls opening of the SARS-CoV-2 spike protein

Export this record

Export record to excel

Large enhancement of response times of a protein conformational switch by computational design

Export this record

Export record to excel

Chong, Lillian

Export this record

Export record to excel

Chong, Lillian

Export this record

Export record to excel

Molecular Dynamics and Free-Energy Calculations Applied to Affinity Maturation in Antibody 48G7

Export this record

Export record to excel

A glycan gate controls opening of the SARS-CoV-2 spike protein

Export this record

Export record to excel

SHINE: Deterministic Many-to-Many clustering of Molecular Pathways

Export this record

Export record to excel

Identification of Small Molecule Ligand Binding Sites On and In the ARNT PAS-B Domain

Export this record

Export record to excel

The RED scheme: Rate-constant estimation from pre-steady state weighted ensemble simulations

Export this record

Export record to excel

A Minimal, Adaptive Binning Scheme for Weighted Ensemble Simulations

Export this record

Export record to excel

Extensive Evaluation of Weighted Ensemble Strategies for Calculating Rate Constants and Binding Affinities of Molecular Association/Dissociation Processes

Export this record

Export record to excel

Development and Validation of Fluorinated Amino Acid Parameters for use with the AMBER ff15ipq Protein Force Field

Export this record

Export record to excel

Protein-protein binding pathways and calculations of rate constants using fully continuous explicit solvent simulations

Export this record

Export record to excel

A Glycan Gate Controls Opening of the SARS-CoV-2 Spike Protein

Export this record

Export record to excel

The need to implement FAIR principles in biomolecular simulations

Export this record

Export record to excel

Structure-Based Experimental Datasets for Benchmarking of Protein Simulation Force Fields

Export this record

Export record to excel

A Suite of Advanced Tutorials for the WESTPA 2.0 Rare-Events Sampling Software

Export this record

Export record to excel

Simultaneous computation of dynamical and equilibrium information using a weighted ensemble of trajectories

Refine your search