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179 results for Chromosome+Painting+-+methods

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ArticlesPeer ReviewedFull Text
Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes
Author / Creator:Beliveau, Brian J. ; Boettiger, Alistair N. ; Avendaño, Maier S. ; Jungmann, Ralf ; McCole, Ruth B. ; Joyce, Eric F. ; Kim-Kiselak, Caroline ; Bantignies, Frédéric ; Fonseka, Chamith Y. ; Erceg, Jelena ; Hannan, Mohammed A. ; Hoang, Hien G. ; Colognori, David ; Lee, Jeannie T. ; Shih, William M. ; Yin, Peng ; Zhuang, Xiaowei ; Wu, Chao-ting
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2015-05, Vol.6 (1), p.7147, Article 7147
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Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling
Author / Creator:Nir, Guy ; Farabella, Irene ; Pérez Estrada, Cynthia ; Ebeling, Carl G ; Beliveau, Brian J ; Sasaki, Hiroshi M ; Lee, S Dean ; Nguyen, Son C ; McCole, Ruth B ; Chattoraj, Shyamtanu ; Erceg, Jelena ; AlHaj Abed, Jumana ; Martins, Nuno M C ; Nguyen, Huy Q ; Hannan, Mohammed A ; Russell, Sheikh ; Durand, Neva C ; Rao, Suhas S P ; Kishi, Jocelyn Y ; Soler-Vila, Paula ; Di Pierro, Michele ; Onuchic, José N ; Callahan, Steven P ; Schreiner, John M ; Stuckey, Jeff A ; Yin, Peng ; Aiden, Erez Lieberman ; Marti-Renom, Marc A ; Wu, C-Ting
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2018-12, Vol.14 (12), p.e1007872-e1007872
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A Genetic Atlas of Human Admixture History
Author / Creator:Hellenthal, Garrett ; Busby, George B. J. ; Band, Gavin ; Wilson, James F. ; Capelli, Cristian ; Falush, Daniel ; Myers, Simon
Publisher:United States: American Association for the Advancement of Science
Journal title:Science (American Association for the Advancement of Science), 2014-02, Vol.343 (6172), p.747-751
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Chromosome-Specific Painting in Cucumis Species Using Bulked Oligonucleotides
Author / Creator:Han, Yonghua ; Zhang, Tao ; Thammapichai, Paradee ; Weng, Yiqun ; Jiang, Jiming
Publisher:United States: Genetics Society of America
Journal title:Genetics (Austin), 2015-07, Vol.200 (3), p.771-779
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3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing
Author / Creator:Nguyen, Huy Q. ; Chattoraj, Shyamtanu ; Castillo, David ; Nguyen, Son C. ; Nir, Guy ; Lioutas, Antonios ; Hershberg, Elliot A. ; Martins, Nuno M. C. ; Reginato, Paul L. ; Hannan, Mohammed ; Beliveau, Brian J. ; Church, George M. ; Daugharthy, Evan R. ; Marti-Renom, Marc A. ; Wu, C.-ting
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2020-08, Vol.17 (8), p.822-832
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Whole-chromosome paints in maize reveal rearrangements, nuclear domains, and chromosomal relationships
Author / Creator:Albert, Patrice S. ; Zhang, Tao ; 张韬 ; Semrau, Kassandra ; Rouillard, Jean-Marie ; Kao, Yu-Hsin ; Wang, Chung-Ju Rachel ; Danilova, Tatiana V. ; Jiang, Jiming ; Birchler, James A.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2019-01, Vol.116 (5), p.1679-1685
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Comparative Oligo-FISH Mapping: An Efficient and Powerful Methodology To Reveal Karyotypic and Chromosomal Evolution
Author / Creator:Braz, Guilherme T ; He, Li ; Zhao, Hainan ; Zhang, Tao ; Semrau, Kassandra ; Rouillard, Jean-Marie ; Torres, Giovana A ; Jiang, Jiming
Publisher:United States: Genetics Society of America
Journal title:Genetics (Austin), 2018-02, Vol.208 (2), p.513-523
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Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes
Author / Creator:Beliveau, Brian J. ; Joyce, Eric F. ; Apostolopoulos, Nicholas ; Yilmaz, Feyza ; Fonseka, Chamith Y. ; McCole, Ruth B. ; Chang, Yiming ; Li, Jin Billy ; Senaratne, Tharanga Niroshini ; Williams, Benjamin R. ; Rouillard, Jean-Marie ; Wu, Chao-ting
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2012-12, Vol.109 (52), p.21301-21306
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Patterns of microchromosome organization remain highly conserved throughout avian evolution
Author / Creator:O’Connor, Rebecca E. ; Kiazim, Lucas ; Skinner, Ben ; Fonseka, Gothami ; Joseph, Sunitha ; Jennings, Rebecca ; Larkin, Denis M. ; Griffin, Darren K.
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Chromosoma, 2019-03, Vol.128 (1), p.21-29
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Meiotic crossovers characterized by haplotype-specific chromosome painting in maize
Author / Creator:do Vale Martins, Lívia ; Yu, Fan ; Zhao, Hainan ; Dennison, Tesia ; Lauter, Nick ; Wang, Haiyan ; Deng, Zuhu ; Thompson, Addie ; Semrau, Kassandra ; Rouillard, Jean-Marie ; Birchler, James A. ; Jiang, Jiming
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2019-10, Vol.10 (1), p.4604-10, Article 4604
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Development of oligonucleotides and multiplex probes for quick and accurate identification of wheat and Thinopyrum bessarabicum chromosomes
Author / Creator:Du, Pei ; Zhuang, Lifang ; Wang, Yanzhi ; Yuan, Li ; Wang, Qing ; Wang, Danrui ; Dawadondup ; Tan, Lijun ; Shen, Jian ; Xu, Haibin ; Zhao, Han ; Chu, Chenggen ; Qi, Zengjun
Publisher:Canada: NRC Research Press
Journal title:Genome, 2017-02, Vol.60 (2), p.93-103
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PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments
Author / Creator:Hershberg, Elliot A. ; Camplisson, Conor K. ; Close, Jennie L. ; Attar, Sahar ; Chern, Ryan ; Liu, Yuzhen ; Akilesh, Shreeram ; Nicovich, Philip R. ; Beliveau, Brian J.
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2021-08, Vol.18 (8), p.937-944
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Meiotic crossovers revealed by differential visualization of homologous chromosomes using enhanced haplotype oligo‐painting in cucumber
Author / Creator:Zhao, Qinzheng ; Xiong, Zhenhui ; Cheng, Chunyan ; Wang, Yuhui ; Feng, Xianbo ; Yu, Xiaqing ; Lou, Qunfeng ; Chen, Jinfeng
Publisher:England: John Wiley & Sons, Inc
Journal title:Plant biotechnology journal, 2024-12, Vol.23 (3), p.887-899
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Chromosome painting and its applications in cultivated and wild rice
Author / Creator:Hou, Lili ; Xu, Meng ; Zhang, Tao ; Xu, Zhihao ; Wang, Weiyun ; Zhang, Jianxiang ; Yu, Meimei ; Ji, Wen ; Zhu, Cenwen ; Gong, Zhiyun ; Gu, Minghong ; Jiang, Jiming ; Yu, Hengxiu
Publisher:England: BioMed Central Ltd
Journal title:BMC plant biology, 2018-06, Vol.18 (1), p.110-110, Article 110
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Chromosome painting and phylogenetic analysis suggest that the genus Lophostoma (Chiroptera, Phyllostomidae) is paraphyletic
Author / Creator:da Silva, Natalia Karina Nascimento ; Nagamachi, Cleusa Yoshiko ; Rodrigues, Luis Reginaldo Ribeiro ; O’Brien, Patricia Caroline Mary ; Yang, Fengtang ; Ferguson-Smith, Malcolm Andrew ; Pieczarka, Julio Cesar
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-11, Vol.12 (1), p.19514-19514, Article 19514
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Chromosome Painting in Cultivated Bananas and Their Wild Relatives ( Musa spp.) Reveals Differences in Chromosome Structure
Author / Creator:Šimoníková, Denisa ; Němečková, Alžběta ; Čížková, Jana ; Brown, Allan ; Swennen, Rony ; Doležel, Jaroslav ; Hřibová, Eva
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2020-10, Vol.21 (21), p.7915
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Chromosome painting using repetitive DNA sequences as probes for somatic chromosome identification in maize
Author / Creator:Kato, A ; Lamb, J.C ; Birchler, J.A
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2004-09, Vol.101 (37), p.13554-13559
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Comparative chromosome maps between the stone curlew and three ciconiiform species (the grey heron, little egret and crested ibis)
Author / Creator:Wang, Jinhuan ; Su, Weiting ; Hu, Yi ; Li, Shengbin ; O'Brien, Patricia C M ; Ferguson-Smith, Malcolm A ; Yang, Fengtang ; Nie, Wenhui
Publisher:England: BioMed Central Ltd
Journal title:BMC ecology and evolution, 2022-03, Vol.22 (1), p.23-23, Article 23
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Reconstructing the Evolution of Brachypodium Genomes Using Comparative Chromosome Painting
Author / Creator:Betekhtin, Alexander ; Jenkins, Glyn ; Hasterok, Robert
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-12, Vol.9 (12), p.e115108
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Molecular cytogenetic characterization of multiple intrachromosomal rearrangements in two representatives of the genus Turdus (Turdidae, Passeriformes)
Author / Creator:Kretschmer, Rafael ; Gunski, Ricardo José ; Garnero, Analía Del Valle ; Furo, Ivanete de Oliveira ; O'Brien, Patricia C M ; Ferguson-Smith, Malcolm A ; de Oliveira, Edivaldo Herculano Corrêa
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-07, Vol.9 (7), p.e103338
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Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes

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Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling

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A Genetic Atlas of Human Admixture History

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Chromosome-Specific Painting in Cucumis Species Using Bulked Oligonucleotides

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3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing

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Whole-chromosome paints in maize reveal rearrangements, nuclear domains, and chromosomal relationships

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Comparative Oligo-FISH Mapping: An Efficient and Powerful Methodology To Reveal Karyotypic and Chromosomal Evolution

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Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes

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Patterns of microchromosome organization remain highly conserved throughout avian evolution

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Meiotic crossovers characterized by haplotype-specific chromosome painting in maize

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Development of oligonucleotides and multiplex probes for quick and accurate identification of wheat and Thinopyrum bessarabicum chromosomes

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PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments

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Meiotic crossovers revealed by differential visualization of homologous chromosomes using enhanced haplotype oligo‐painting in cucumber

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Chromosome painting and its applications in cultivated and wild rice

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Chromosome painting and phylogenetic analysis suggest that the genus Lophostoma (Chiroptera, Phyllostomidae) is paraphyletic

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Chromosome Painting in Cultivated Bananas and Their Wild Relatives ( Musa spp.) Reveals Differences in Chromosome Structure

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Chromosome painting using repetitive DNA sequences as probes for somatic chromosome identification in maize

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Comparative chromosome maps between the stone curlew and three ciconiiform species (the grey heron, little egret and crested ibis)

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Reconstructing the Evolution of Brachypodium Genomes Using Comparative Chromosome Painting

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Molecular cytogenetic characterization of multiple intrachromosomal rearrangements in two representatives of the genus Turdus (Turdidae, Passeriformes)

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