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ArticlesPeer ReviewedFull Text
Comparative genome analyses of mycobacteria give better insights into their evolution
Author / Creator:Wee, Wei Yee ; Dutta, Avirup ; Choo, Siew Woh
Publisher:United States: Public Library of Science
Journal title:PloS one, 2017-03, Vol.12 (3), p.e0172831-e0172831
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ArticlesPeer ReviewedFull Text
Comparative genome sequencing and analyses of Mycobacterium cosmeticum reveal potential for biodesulfization of gasoline
Author / Creator:Wee, Wei Yee ; Dutta, Avirup ; Jayaraj, Jayasyaliny ; Choo, Siew Woh
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-04, Vol.14 (4), p.e0214663
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ArticlesPeer ReviewedFull Text
In-Silico Structural and Functional Characterization of a V. cholerae O395 Hypothetical Protein Containing a PDZ1 and an Uncommon Protease Domain
Author / Creator:Dutta, Avirup ; Katarkar, Atul ; Chaudhuri, Keya
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-02, Vol.8 (2), p.e56725-e56725
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ArticlesPeer ReviewedFull Text
Comprehensive genome analysis of a pangolin-associated Paraburkholderia fungorum provides new insights into its secretion systems and virulence
Author / Creator:Tan, Ka Yun ; Dutta, Avirup ; Tan, Tze King ; Hari, Ranjeev ; Othman, Rofina Y. ; Choo, Siew Woh
Publisher:United States: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2020-09, Vol.8, p.e9733, Article e9733
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ArticlesPeer ReviewedFull Text
Comparative Genomic Analysis Reveals a Possible Novel Non-Tuberculous Mycobacterium Species with High Pathogenic Potential
Author / Creator:Choo, Siew Woh ; Dutta, Avirup ; Wong, Guat Jah ; Wee, Wei Yee ; Ang, Mia Yang ; Siow, Cheuk Chuen
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-04, Vol.11 (4), p.e0150413-e0150413
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ArticlesPeer ReviewedFull Text
Evaluation of Efficacy of Curcumin along with Lycopene and Piperine in the Management of Oral Submucous Fibrosis
Author / Creator:Mahato, Basudev ; Prodhan, Chandraday ; Mandal, Samir ; Dutta, Avirup ; Kumar, Parna ; Deb, Tushar ; Jha, Tarun ; Chaudhuri, Keya
Publisher:India: Wolters Kluwer - Medknow
Journal title:Contemporary clinical dentistry, 2019-07, Vol.10 (3), p.531-541
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ArticlesPeer ReviewedFull Text
Potential contribution of SIM2 and ETS2 functional polymorphisms in Down syndrome associated malignancies
Author / Creator:Chatterjee, Arpita ; Dutta, Samikshan ; Mukherjee, Sanjit ; Mukherjee, Nupur ; Dutta, Avirup ; Mukherjee, Ashis ; Sinha, Swagata ; Panda, Chinmay Kumar ; Chaudhuri, Keya ; Roy, Ananda L ; Mukhopadhyay, Kanchan
Publisher:England: BioMed Central
Journal title:BMC genetics, 2013-01, Vol.14 (1), p.12-12, Article 12
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ArticlesPeer ReviewedFull Text
NeisseriaBase: a specialised Neisseria genomic resource and analysis platform
Author / Creator:Zheng, Wenning ; Mutha, Naresh V.R. ; Heydari, Hamed ; Dutta, Avirup ; Siow, Cheuk Chuen ; Jakubovics, Nicholas S. ; Wee, Wei Yee ; Tan, Shi Yang ; Ang, Mia Yang ; Wong, Guat Jah ; Choo, Siew Woh
Publisher:United States: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2016-03, Vol.4, p.e1698-e1698, Article e1698
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ArticlesPeer ReviewedFull Text
Analysis of tRNA composition and folding in psychrophilic, mesophilic and thermophilic genomes: indications for thermal adaptation
Author / Creator:Dutta, Avirup ; Chaudhuri, Keya
Publisher:Oxford, UK: Oxford, UK : Blackwell Publishing Ltd
Journal title:FEMS microbiology letters, 2010-04, Vol.305 (2), p.100-108
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ArticlesPeer ReviewedFull Text
Evolutionary study of Yersinia genomes deciphers emergence of human pathogenic species
Author / Creator:Tan, Shi Yang ; Tan, Irene Kit Ping ; Tan, Mui Fern ; Dutta, Avirup ; Choo, Siew Woh
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2016-10, Vol.6 (1), p.36116-36116, Article 36116
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ArticlesPeer ReviewedFull Text
Significantly increased load of hereditary cancer-linked germline variants in infertile men
Author / Creator:Valkna, Anu ; Juchnewitsch, Anna-Grete ; Põlluaas, Lisanna ; Lillepea, Kristiina ; Tjagur, Stanislav ; Dutta, Avirup ; Pomm, Kristjan ; Punab, Margus ; Laan, Maris
Publisher:England: Oxford University Press
Journal title:Human reproduction open, 2025, Vol.2025 (2), p.hoaf008
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ArticlesPeer ReviewedFull Text
Analysis oftRNA composition and folding in psychrophilic, mesophilic and thermophilic genomes: indications for thermal adaptation
Author / Creator:DUTTA, Avirup ; CHAUDHURI, Keya
Publisher:Oxford: Wiley-Blackwell
Journal title:FEMS microbiology letters, 2010, Vol.305 (2), p.100-108
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ArticlesPeer ReviewedFull Text
YersiniaBase: a genomic resource and analysis platform for comparative analysis of Yersinia
Author / Creator:Tan, Shi Yang ; Dutta, Avirup ; Jakubovics, Nicholas S ; Ang, Mia Yang ; Siow, Cheuk Chuen ; Mutha, Naresh VR ; Heydari, Hamed ; Wee, Wei Yee ; Wong, Guat Jah ; Choo, Siew Woh
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2015-01, Vol.16 (1), p.9-9, Article 9
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ArticlesPeer ReviewedFull Text
MycoCAP - Mycobacterium Comparative Analysis Platform
Author / Creator:Choo, Siew Woh ; Ang, Mia Yang ; Dutta, Avirup ; Tan, Shi Yang ; Siow, Cheuk Chuen ; Heydari, Hamed ; Mutha, Naresh V. R. ; Wee, Wei Yee ; Wong, Guat Jah
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2015-12, Vol.5 (1), p.18227-18227, Article 18227
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ArticlesPeer ReviewedFull Text
In silico comparative study of the genomic islands of Vibrio cholerae MJ1236 with those of Classical and El Tor N16961 strains of Vibrio cholerae: Genomic islands of Vibrio cholerae MJ1236
Author / Creator:Dutta, Avirup ; Kundu, Jayanta Kumar ; Chatterjee, Raghunath ; Chaudhuri, Keya
Journal title:FEMS microbiology letters, 2011-08, Vol.321 (1), p.75-81
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ArticlesPeer ReviewedFull Text
Development of ListeriaBase and comparative analysis of Listeria monocytogenes
Author / Creator:Tan, Mui Fern ; Siow, Cheuk Chuen ; Dutta, Avirup ; Mutha, Naresh VR ; Wee, Wei Yee ; Heydari, Hamed ; Tan, Shi Yang ; Ang, Mia Yang ; Wong, Guat Jah ; Choo, Siew Woh
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2015-10, Vol.16 (1), p.755-755, Article 755
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ArticlesPeer ReviewedFull Text
In silico comparative study of the genomic islands of Vibrio cholerae MJ1236 with those of Classical and El Tor N16961 strains of Vibrio cholerae
Author / Creator:Dutta, Avirup ; Kundu, Jayanta Kumar ; Chatterjee, Raghunath ; Chaudhuri, Keya
Publisher:Oxford, UK: Blackwell Publishing Ltd
Journal title:FEMS microbiology letters, 2011-08, Vol.321 (1), p.75-81
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ArticlesPeer ReviewedFull Text
Genetic analysis of blood molecular phenotypes reveals common properties in the regulatory networks affecting complex traits
Author / Creator:Brown, Andrew A. ; Fernandez-Tajes, Juan J. ; Hong, Mun-gwan ; Brorsson, Caroline A. ; Koivula, Robert W. ; Davtian, David ; Dupuis, Théo ; Sartori, Ambra ; Michalettou, Theodora-Dafni ; Forgie, Ian M. ; Adam, Jonathan ; Allin, Kristine H. ; Caiazzo, Robert ; Cederberg, Henna ; De Masi, Federico ; Elders, Petra J. M. ; Giordano, Giuseppe N. ; Haid, Mark ; Hansen, Torben ; Hansen, Tue H. ; Hattersley, Andrew T. ; Heggie, Alison J. ; Howald, Cédric ; Jones, Angus G. ; Kokkola, Tarja ; Laakso, Markku ; Mahajan, Anubha ; Mari, Andrea ; McDonald, Timothy J. ; McEvoy, Donna ; Mourby, Miranda ; Musholt, Petra B. ; Nilsson, Birgitte ; Pattou, Francois ; Penet, Deborah ; Raverdy, Violeta ; Ridderstråle, Martin ; Romano, Luciana ; Rutters, Femke ; Sharma, Sapna ; Teare, Harriet ; ‘t Hart, Leen ; Tsirigos, Konstantinos D. ; Vangipurapu, Jagadish ; Vestergaard, Henrik ; Brunak, Søren ; Franks, Paul W. ; Frost, Gary ; Grallert, Harald ; Jablonka, Bernd ; McCarthy, Mark I. ; Pavo, Imre ; Pedersen, Oluf ; Ruetten, Hartmut ; Walker, Mark ; Adamski, Jerzy ; Schwenk, Jochen M. ; Pearson, Ewan R. ; Dermitzakis, Emmanouil T. ; Viñuela, Ana
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2023-08, Vol.14 (1), p.5062-17, Article 5062
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Comparative genome analyses of mycobacteria give better insights into their evolution

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Comparative genome sequencing and analyses of Mycobacterium cosmeticum reveal potential for biodesulfization of gasoline

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In-Silico Structural and Functional Characterization of a V. cholerae O395 Hypothetical Protein Containing a PDZ1 and an Uncommon Protease Domain

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Comprehensive genome analysis of a pangolin-associated Paraburkholderia fungorum provides new insights into its secretion systems and virulence

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Comparative Genomic Analysis Reveals a Possible Novel Non-Tuberculous Mycobacterium Species with High Pathogenic Potential

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Evaluation of Efficacy of Curcumin along with Lycopene and Piperine in the Management of Oral Submucous Fibrosis

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Potential contribution of SIM2 and ETS2 functional polymorphisms in Down syndrome associated malignancies

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NeisseriaBase: a specialised Neisseria genomic resource and analysis platform

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Analysis of tRNA composition and folding in psychrophilic, mesophilic and thermophilic genomes: indications for thermal adaptation

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Evolutionary study of Yersinia genomes deciphers emergence of human pathogenic species

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Significantly increased load of hereditary cancer-linked germline variants in infertile men

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Analysis oftRNA composition and folding in psychrophilic, mesophilic and thermophilic genomes: indications for thermal adaptation

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YersiniaBase: a genomic resource and analysis platform for comparative analysis of Yersinia

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MycoCAP - Mycobacterium Comparative Analysis Platform

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In silico comparative study of the genomic islands of Vibrio cholerae MJ1236 with those of Classical and El Tor N16961 strains of Vibrio cholerae: Genomic islands of Vibrio cholerae MJ1236

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Development of ListeriaBase and comparative analysis of Listeria monocytogenes

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In silico comparative study of the genomic islands of Vibrio cholerae MJ1236 with those of Classical and El Tor N16961 strains of Vibrio cholerae

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Genetic analysis of blood molecular phenotypes reveals common properties in the regulatory networks affecting complex traits

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