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Virulome and genome analyses identify associations between antimicrobial resistance genes and virulence factors in highly drug-resistant Escherichia coli isolated from veal calves
Author / Creator:Haley, Bradd J. ; Kim, Seon Woo ; Salaheen, Serajus ; Hovingh, Ernest ; Van Kessel, Jo Ann S.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2022-03, Vol.17 (3), p.e0265445
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Virulome analysis of Escherichia coli ST117 from bovine sources identifies similarities and differences with strains isolated from other food animals
Author / Creator:Haley, Bradd J. ; Salaheen, Serajus ; Kim, Seon Woo ; Van Kessel, Jo Ann
Publisher:United States: Public Library of Science
Journal title:PloS one, 2024-01, Vol.19 (1), p.e0296514
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Genetic diversity and virulence profiles of Listeria monocytogenes recovered from bulk tank milk, milk filters, and milking equipment from dairies in the United States (2002 to 2014)
Author / Creator:Kim, Seon Woo ; Haendiges, Julie ; Keller, Eric N. ; Myers, Robert ; Kim, Alexander ; Lombard, Jason E. ; Karns, Jeffrey S. ; Van Kessel, Jo Ann S. ; Haley, Bradd J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2018-05, Vol.13 (5), p.e0197053
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Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation
Author / Creator:Bickhart, Derek M. ; Watson, Mick ; Koren, Sergey ; Panke-Buisse, Kevin ; Cersosimo, Laura M. ; Press, Maximilian O. ; Van Tassell, Curtis P. ; Van Kessel, Jo Ann S. ; Haley, Bradd J. ; Kim, Seon Woo ; Heiner, Cheryl ; Suen, Garret ; Bakshy, Kiranmayee ; Liachko, Ivan ; Sullivan, Shawn T. ; Myer, Phillip R. ; Ghurye, Jay ; Pop, Mihai ; Weimer, Paul J. ; Phillippy, Adam M. ; Smith, Timothy P. L.
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2019-08, Vol.20 (1), p.153-153, Article 153
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Differences between the global transcriptomes of Salmonella enterica serovars Dublin and Cerro infecting bovine epithelial cells
Author / Creator:Salaheen, Serajus ; Kim, Seon Woo ; Haley, Bradd J. ; Van Kessel, Jo Ann S.
Publisher:London: BioMed Central Ltd
Journal title:BMC genomics, 2022-07, Vol.23 (1), p.1-11, Article 498
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Genomic and Evolutionary Analysis of Two Salmonella enterica Serovar Kentucky Sequence Types Isolated from Bovine and Poultry Sources in North America
Author / Creator:Haley, Bradd J. ; Kim, Seon Woo ; Pettengill, James ; Luo, Yan ; Karns, Jeffrey S. ; Van Kessel, Jo Ann S.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-10, Vol.11 (10), p.e0161225-e0161225
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ArticlesPeer ReviewedFull Text
Genomic diversity of 2010 Haitian cholera outbreak strains
Author / Creator:Hasan, Nur A ; Choi, Seon Young ; Eppinger, Mark ; Clark, Philip W ; Chen, Arlene ; Alam, Munirul ; Haley, Bradd J ; Taviani, Elisa ; Hine, Erin ; Su, Qi ; Tallon, Luke J ; Prosper, Joseph B ; Furth, Keziah ; Hoq, M. M ; Li, Huai ; Fraser-Liggett, Claire M ; Cravioto, Alejandro ; Huq, Anwar ; Ravel, Jacques ; Cebula, Thomas A ; Colwell, Rita R
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2012-07, Vol.109 (29), p.E2010-E2017
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Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae
Author / Creator:Chun, Jongsik ; Grim, Christopher J ; Hasan, Nur A ; Lee, Je Hee ; Choi, Seon Young ; Haley, Bradd J ; Taviani, Elisa ; Jeon, Yoon-Seong ; Kim, Dong Wook ; Lee, Jae-Hak ; Brettin, Thomas S ; Bruce, David C ; Challacombe, Jean F ; Detter, J. Chris ; Han, Cliff S ; Munk, A. Christine ; Chertkov, Olga ; Meincke, Linda ; Saunders, Elizabeth ; Walters, Ronald A ; Huq, Anwar ; Nair, G. Balakrish ; Colwell, Rita R
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2009-09, Vol.106 (36), p.15442-15447
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Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species
Author / Creator:Hasan, Nur A. ; Grim, Christopher J. ; Lipp, Erin K. ; Rivera, Irma N. G. ; Chun, Jongsik ; Haley, Bradd J. ; Taviani, Elisa ; Choi, Seon Young ; Hoq, Mozammel ; Munk, A. Christine ; Brettin, Thomas S. ; Bruce, David ; Challacombe, Jean F. ; Detter, J. Chris ; Han, Cliff S. ; Eisen, Jonathan A. ; Huq, Anwar ; Colwell, Rita R.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2015-05, Vol.112 (21), p.E2813-E2819
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Genome-Wide Analysis of Escherichia coli Isolated from Dairy Animals Identifies Virulence Factors and Genes Enriched in Multidrug-Resistant Strains
Author / Creator:Haley, Bradd J. ; Kim, Seon Woo ; Salaheen, Serajus ; Hovingh, Ernest ; Van Kessel, Jo Ann S.
Publisher:Basel: MDPI AG
Journal title:Antibiotics (Basel), 2023-10, Vol.12 (10), p.1559
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ArticlesPeer ReviewedFull Text
Genomic and Phenotypic Characterization of Vibrio cholerae Non-O1 Isolates from a US Gulf Coast Cholera Outbreak
Author / Creator:Haley, Bradd J. ; Choi, Seon Young ; Grim, Christopher J. ; Onifade, Tiffiani J. ; Cinar, Hediye N. ; Tall, Ben D. ; Taviani, Elisa ; Hasan, Nur A. ; Abdullah, AbdulShakur H. ; Carter, Laurenda ; Sahu, Surasri N. ; Kothary, Mahendra H. ; Chen, Arlene ; Baker, Ron ; Hutchinson, Richard ; Blackmore, Carina ; Cebula, Thomas A. ; Huq, Anwar ; Colwell, Rita R.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-04, Vol.9 (4), p.e86264
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Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae
Author / Creator:Haley, Bradd J ; Grim, Christopher J ; Hasan, Nur A ; Choi, Seon-Young ; Chun, Jongsik ; Brettin, Thomas S ; Bruce, David C ; Challacombe, Jean F ; Detter, J Chris ; Han, Cliff S ; Huq, Anwar ; Colwell, Rita R
Publisher:England: BioMed Central Ltd
Journal title:BMC microbiology, 2010-05, Vol.10 (1), p.154-154, Article 154
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Comparative genomics of clinical and environmental Vibrio mimicus
Author / Creator:Hasan, Nur A. ; Grim, Christopher J. ; Haley, Bradd J. ; Chun, Jongsik ; Alam, Munirul ; Taviani, Elisa ; Hoq, Mozammel ; Munk, A. Christine ; Saunders, Elizabeth ; Brettin, Thomas S. ; Bruce, David C. ; Challacombe, Jean F. ; Detter, J. Chris ; Han, Cliff S. ; Xie, Gary ; Nair, G. Balakrish ; Huq, Anwar ; Colwell, Rita R.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2010-12, Vol.107 (49), p.21134-21139
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ArticlesPeer ReviewedFull Text
Improvements to a PCR-Based Serogrouping Scheme for Salmonella enterica from Dairy Farm Samples
Author / Creator:Karns, Jeffrey S. ; Haley, Bradd J. ; Van Kessel, Jo Ann S.
Publisher:United States: Elsevier Limited
Journal title:Journal of food protection, 2015-06, Vol.78 (6), p.1182-1185
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An additional step in the transmission of Yersinia pestis?
Author / Creator:Easterday, W Ryan ; Kausrud, Kyrre L ; Star, Bastiaan ; Heier, Lise ; Haley, Bradd J ; Ageyev, Vladimir ; Colwell, Rita R ; Stenseth, Nils Chr
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2012-02, Vol.6 (2), p.231-236
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Genome Sequence of a Novel Multiple-Antibiotic-Resistant Member of the Erysipelotrichaceae Family Isolated from a Swine Manure Storage Pit
Author / Creator:Haley, Bradd J ; Woo, Kim Seon ; Whitehead, Terence R
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-09, Vol.4 (5)
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Genome Sequences of Two Salmonella enterica Serovar Kentucky Isolates Recovered from Poultry Carcasses in the United States
Author / Creator:Haley, Bradd J ; Woo, Kim Seon ; Liljebjelke, Karen ; Guard, Jean ; Van Kessel Jo Ann S.
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-11, Vol.4 (6)
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Genome Sequences of Ralstonia insidiosa Type Strain ATCC 49129 and Strain FC1138, a Strong Biofilm Producer Isolated from a Fresh-Cut Produce-Processing Plant
Author / Creator:Xu, Yunfeng ; Nagy Attila ; Xianghe, Yan ; Haley, Bradd J ; Woo, Kim Seon ; Liu, Nancy T ; Nou Xiangwu
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-08, Vol.4 (4)
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Occurrence of Vibrio cholerae in Municipal and Natural Waters and Incidence of Cholera in Azerbaijan
Author / Creator:Gurbanov, Shair ; Akhmadov, Rashid ; Shamkhalova, Gulnara ; Akhmadova, Sevinj ; Haley, Bradd J ; Colwell, Rita R ; Huq, Anwar
Publisher:New York: Springer-Verlag
Journal title:EcoHealth, 2011-12, Vol.8 (4), p.468-477
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Complete Genome Sequence and Methylome of Salmonella enterica subsp. enterica Cerro, a Frequent Dairy Cow Serovar
Author / Creator:Haley, Bradd J ; Pirone Cary ; Muruvanda Tim ; Brown, Eric ; Allard, Marc ; Karns, Jeffrey S ; Van Kessel Jo Ann S.
Publisher:Washington: American Society for Microbiology
Journal title:Microbiology resource announcements, 2016-01, Vol.4 (1)
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Showing 1 to 20 of 28 results

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Virulome and genome analyses identify associations between antimicrobial resistance genes and virulence factors in highly drug-resistant Escherichia coli isolated from veal calves

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Virulome analysis of Escherichia coli ST117 from bovine sources identifies similarities and differences with strains isolated from other food animals

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Genetic diversity and virulence profiles of Listeria monocytogenes recovered from bulk tank milk, milk filters, and milking equipment from dairies in the United States (2002 to 2014)

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Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation

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Differences between the global transcriptomes of Salmonella enterica serovars Dublin and Cerro infecting bovine epithelial cells

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Genomic and Evolutionary Analysis of Two Salmonella enterica Serovar Kentucky Sequence Types Isolated from Bovine and Poultry Sources in North America

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Genomic diversity of 2010 Haitian cholera outbreak strains

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Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae

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Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species

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Genome-Wide Analysis of Escherichia coli Isolated from Dairy Animals Identifies Virulence Factors and Genes Enriched in Multidrug-Resistant Strains

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Genomic and Phenotypic Characterization of Vibrio cholerae Non-O1 Isolates from a US Gulf Coast Cholera Outbreak

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Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae

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Comparative genomics of clinical and environmental Vibrio mimicus

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Improvements to a PCR-Based Serogrouping Scheme for Salmonella enterica from Dairy Farm Samples

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An additional step in the transmission of Yersinia pestis?

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Genome Sequence of a Novel Multiple-Antibiotic-Resistant Member of the Erysipelotrichaceae Family Isolated from a Swine Manure Storage Pit

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Genome Sequences of Two Salmonella enterica Serovar Kentucky Isolates Recovered from Poultry Carcasses in the United States

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Genome Sequences of Ralstonia insidiosa Type Strain ATCC 49129 and Strain FC1138, a Strong Biofilm Producer Isolated from a Fresh-Cut Produce-Processing Plant

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Occurrence of Vibrio cholerae in Municipal and Natural Waters and Incidence of Cholera in Azerbaijan

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Complete Genome Sequence and Methylome of Salmonella enterica subsp. enterica Cerro, a Frequent Dairy Cow Serovar

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