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ArticlesPeer ReviewedFull Text
Hyperosmotic priming of Arabidopsis seedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome
Author / Creator:Sani, Emanuela ; Herzyk, Pawel ; Perrella, Giorgio ; Colot, Vincent ; Amtmann, Anna
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology (Online Edition), 2013-06, Vol.14 (6), p.R59-R59, Article R59
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The control of human mesenchymal cell differentiation using nanoscale symmetry and disorder
Author / Creator:Dalby, Matthew J. ; Gadegaard, Nikolaj ; Tare, Rahul ; Andar, Abhay ; Riehle, Mathis O. ; Herzyk, Pawel ; Wilkinson, Chris D. W. ; Oreffo, Richard O. C.
Publisher:London: Nature Publishing Group UK
Journal title:Nature materials, 2007-12, Vol.6 (12), p.997-1003
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ArticlesPeer ReviewedFull Text
De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
Author / Creator:Carruthers, Madeleine ; Yurchenko, Andrey A ; Augley, Julian J ; Adams, Colin E ; Herzyk, Pawel ; Elmer, Kathryn R
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2018-01, Vol.19 (1), p.32-32, Article 32
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ArticlesPeer ReviewedFull Text
High-resolution human cytomegalovirus transcriptome
Author / Creator:Gatherer, Derek ; Seirafian, Sepehr ; Cunningham, Charles ; Holton, Mary ; Dargan, Derrick J ; Baluchova, Katarina ; Hector, Ralph D ; Galbraith, Julie ; Herzyk, Pawel ; Wilkinson, Gavin W. G ; Davison, Andrew J
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2011-12, Vol.108 (49), p.19755-19760
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Host-associated niche metabolism controls enteric infection through fine-tuning the regulation of type 3 secretion
Author / Creator:Connolly, James P. R. ; Slater, Sabrina L. ; O’Boyle, Nicky ; Goldstone, Robert J. ; Crepin, Valerie F. ; Ruano-Gallego, David ; Herzyk, Pawel ; Smith, David G. E. ; Douce, Gillian R. ; Frankel, Gad ; Roe, Andrew J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2018-10, Vol.9 (1), p.4187-14, Article 4187
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ArticlesPeer ReviewedFull Text
UV-B-specific signaling component orchestrates plant UV protection
Author / Creator:Brown, B.A ; Cloix, C ; Jiang, G.H ; Kaiserli, E ; Herzyk, P ; Kliebenstein, D.J ; Jenkins, G.I
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2005-12, Vol.102 (50), p.18225-18230
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Sterol 14α-demethylase mutation leads to amphotericin B resistance in Leishmania mexicana
Author / Creator:Mwenechanya, Roy ; Kovářová, Julie ; Dickens, Nicholas J ; Mudaliar, Manikhandan ; Herzyk, Pawel ; Vincent, Isabel M ; Weidt, Stefan K ; Burgess, Karl E ; Burchmore, Richard J S ; Pountain, Andrew W ; Smith, Terry K ; Creek, Darren J ; Kim, Dong-Hyun ; Lepesheva, Galina I ; Barrett, Michael P
Publisher:United States: Public Library of Science
Journal title:PLoS neglected tropical diseases, 2017-06, Vol.11 (6), p.e0005649-e0005649
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ArticlesPeer ReviewedFull Text
Predicting the outer membrane proteome of Pasteurella multocida based on consensus prediction enhanced by results integration and manual confirmation
Author / Creator:E-komon, Teerasak ; Burchmore, Richard ; Herzyk, Pawel ; Davies, Robert
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2012-04, Vol.13 (1), p.63-63, Article 63
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Data-mining the FlyAtlas online resource to identify core functional motifs across transporting epithelia
Author / Creator:Chintapalli, Venkateswara R ; Wang, Jing ; Herzyk, Pawel ; Davies, Shireen A ; Dow, Julian A T
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2013-07, Vol.14 (1), p.518-518, Article 518
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ArticlesPeer ReviewedFull Text
Iterative Group Analysis (iGA): a simple tool to enhance sensitivity and facilitate interpretation of microarray experiments
Author / Creator:Breitling, Rainer ; Amtmann, Anna ; Herzyk, Pawel
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2004-03, Vol.5 (1), p.34-34, Article 34
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ArticlesPeer ReviewedFull Text
Graph-based iterative Group Analysis enhances microarray interpretation
Author / Creator:Breitling, Rainer ; Amtmann, Anna ; Herzyk, Pawel
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2004-07, Vol.5 (1), p.100-100, Article 100
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Functional correlates of positional and gender-specific renal asymmetry in Drosophila
Author / Creator:Chintapalli, Venkateswara R ; Terhzaz, Selim ; Wang, Jing ; Al Bratty, Mohammed ; Watson, David G ; Herzyk, Pawel ; Davies, Shireen A ; Dow, Julian A T
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-04, Vol.7 (4), p.e32577
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ArticlesPeer ReviewedFull Text
Correction to: De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
Author / Creator:Carruthers, Madeleine ; Yurchenko, Andrey A ; Augley, Julian J ; Adams, Colin E ; Herzyk, Pawel ; Elmer, Kathryn R
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2018-06, Vol.19 (1), p.448-448, Article 448
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ArticlesPeer ReviewedFull Text
Author Correction: Host-associated niche metabolism controls enteric infection through fine-tuning the regulation of type 3 secretion
Author / Creator:Connolly, James P. R. ; Slater, Sabrina L. ; O’Boyle, Nicky ; Goldstone, Robert J. ; Crepin, Valerie F. ; Ruano-Gallego, David ; Herzyk, Pawel ; Smith, David G. E. ; Douce, Gillian R. ; Frankel, Gad ; Roe, Andrew J.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2018-11, Vol.9 (1), p.5148-1, Article 5148
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ArticlesPeer ReviewedFull Text
A gene signature for post-infectious chronic fatigue syndrome
Author / Creator:Gow, John W ; Hagan, Suzanne ; Herzyk, Pawel ; Cannon, Celia ; Behan, Peter O ; Chaudhuri, Abhijit
Publisher:England: BioMed Central Ltd
Journal title:BMC medical genomics, 2009-06, Vol.2 (1), p.38-38, Article 38
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Insertional mutagenesis and deep profiling reveals gene hierarchies and a Myc/p53-dependent bottleneck in lymphomagenesis
Author / Creator:Huser, Camille A ; Gilroy, Kathryn L ; de Ridder, Jeroen ; Kilbey, Anna ; Borland, Gillian ; Mackay, Nancy ; Jenkins, Alma ; Bell, Margaret ; Herzyk, Pawel ; van der Weyden, Louise ; Adams, David J ; Rust, Alistair G ; Cameron, Ewan ; Neil, James C
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2014-02, Vol.10 (2), p.e1004167
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Automatic generation of 3D motifs for classification of protein binding sites
Author / Creator:Nebel, Jean-Christophe ; Herzyk, Pawel ; Gilbert, David R
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2007-08, Vol.8 (1), p.321-321, Article 321
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ArticlesPeer ReviewedFull Text
Regulation of transcription by the Arabidopsis UVR8 photoreceptor involves a specific histone modification
Author / Creator:Velanis, Christos N. ; Herzyk, Pawel ; Jenkins, Gareth I.
Publisher:Dordrecht: Springer Netherlands
Journal title:Plant molecular biology, 2016-11, Vol.92 (4-5), p.425-443
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Alternative Splicing Mediates Responses of the Arabidopsis Circadian Clock to Temperature Changes
Author / Creator:James, Allan B ; Syed, Naeem Hasan ; Bordage, Simon ; Marshall, Jacqueline ; Nimmo, Gillian A ; Jenkins, Gareth I ; Herzyk, Pawel ; Brown, John W.S ; Nimmo, Hugh G
Publisher:England: American Society of Plant Biologists
Journal title:The Plant cell, 2012-03, Vol.24 (3), p.961-981
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De novo repeat interruptions are associated with reduced somatic instability and mild or absent clinical features in myotonic dystrophy type 1
Author / Creator:Cumming, Sarah A ; Hamilton, Mark J ; Robb, Yvonne ; Gregory, Helen ; McWilliam, Catherine ; Cooper, Anneli ; Adam, Berit ; McGhie, Josephine ; Hamilton, Graham ; Herzyk, Pawel ; Tschannen, Michael R ; Worthey, Elizabeth ; Petty, Richard ; Ballantyne, Bob ; Warner, Jon ; Farrugia, Maria Elena ; Longman, Cheryl ; Monckton, Darren G
Publisher:England: Nature Publishing Group
Journal title:European journal of human genetics : EJHG, 2018-11, Vol.26 (11), p.1635-1647
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Hyperosmotic priming of Arabidopsis seedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome

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The control of human mesenchymal cell differentiation using nanoscale symmetry and disorder

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De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species

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High-resolution human cytomegalovirus transcriptome

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Host-associated niche metabolism controls enteric infection through fine-tuning the regulation of type 3 secretion

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UV-B-specific signaling component orchestrates plant UV protection

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Sterol 14α-demethylase mutation leads to amphotericin B resistance in Leishmania mexicana

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Predicting the outer membrane proteome of Pasteurella multocida based on consensus prediction enhanced by results integration and manual confirmation

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Data-mining the FlyAtlas online resource to identify core functional motifs across transporting epithelia

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Iterative Group Analysis (iGA): a simple tool to enhance sensitivity and facilitate interpretation of microarray experiments

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Graph-based iterative Group Analysis enhances microarray interpretation

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Functional correlates of positional and gender-specific renal asymmetry in Drosophila

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Correction to: De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species

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Author Correction: Host-associated niche metabolism controls enteric infection through fine-tuning the regulation of type 3 secretion

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A gene signature for post-infectious chronic fatigue syndrome

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Insertional mutagenesis and deep profiling reveals gene hierarchies and a Myc/p53-dependent bottleneck in lymphomagenesis

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Automatic generation of 3D motifs for classification of protein binding sites

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Regulation of transcription by the Arabidopsis UVR8 photoreceptor involves a specific histone modification

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Alternative Splicing Mediates Responses of the Arabidopsis Circadian Clock to Temperature Changes

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De novo repeat interruptions are associated with reduced somatic instability and mild or absent clinical features in myotonic dystrophy type 1

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