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9 results for Malla,+Sudhir+B.

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ArticlesPeer ReviewedFull Text
MmCMS: mouse models’ consensus molecular subtypes of colorectal cancer
Author / Creator:Amirkhah, Raheleh ; Gilroy, Kathryn ; Malla, Sudhir B. ; Lannagan, Tamsin R. M. ; Byrne, Ryan M. ; Fisher, Natalie C. ; Corry, Shania M. ; Mohamed, Noha-Ehssan ; Naderi-Meshkin, Hojjat ; Mills, Megan L. ; Campbell, Andrew D. ; Ridgway, Rachel A. ; Ahmaderaghi, Baharak ; Murray, Richard ; Llergo, Antoni Berenguer ; Sanz-Pamplona, Rebeca ; Villanueva, Alberto ; Batlle, Eduard ; Salazar, Ramon ; Lawler, Mark ; Sansom, Owen J. ; Dunne, Philip D.
Publisher:London: Nature Publishing Group UK
Journal title:British journal of cancer, 2023-03, Vol.128 (7), p.1333-1343
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Dual gene set enrichment analysis (dualGSEA); an R function that enables more robust biological discovery and pre-clinical model alignment from transcriptomics data
Author / Creator:Bull, Courtney ; Byrne, Ryan M. ; Fisher, Natalie C. ; Corry, Shania M. ; Amirkhah, Raheleh ; Edwards, Jessica ; Hillson, Lily V. S. ; Lawler, Mark ; Ryan, Aideen E. ; Lamrock, Felicity ; Dunne, Philip D. ; Malla, Sudhir B.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2024-12, Vol.14 (1), p.30202-13, Article 30202
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Molecular Subtyping Resource: a user-friendly tool for rapid biological discovery from transcriptional data
Author / Creator:Ahmaderaghi, Baharak ; Amirkhah, Raheleh ; Jackson, James ; Lannagan, Tamsin R. M. ; Gilroy, Kathryn ; Malla, Sudhir B. ; Redmond, Keara L. ; Quinn, Gerard ; McDade, Simon S. ; ACRCelerate Consortium ; Maughan, Tim ; Leedham, Simon ; Campbell, Andrew S. D. ; Sansom, Owen J. ; Lawler, Mark ; Dunne, Philip D.
Publisher:England: The Company of Biologists Ltd
Journal title:Disease models & mechanisms, 2022-03, Vol.15 (3)
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PLAC8-Mediated Activation of NOX4 Signalling Restores Angiogenic Function of Endothelial Colony-Forming Cells in Experimental Hypoxia
Author / Creator:Pun, Shun Hay ; O’Neill, Karla M. ; Edgar, Kevin S. ; Gill, Eleanor K. ; Moez, Arya ; Naderi-Meshkin, Hojjat ; Malla, Sudhir B. ; Hookham, Michelle B. ; Alsaggaf, Mohammed ; Madishetti, Vinuthna Vani ; Botezatu, Bianca ; King, William ; Brunssen, Coy ; Morawietz, Henning ; Dunne, Philip D. ; Brazil, Derek P. ; Medina, Reinhold J. ; Watson, Chris J. ; Grieve, David J.
Publisher:Switzerland: MDPI AG
Journal title:Cells (Basel, Switzerland), 2023-09, Vol.12 (18), p.2220
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Pathway level subtyping identifies a slow-cycling biological phenotype associated with poor clinical outcomes in colorectal cancer
Author / Creator:Malla, Sudhir B. ; Byrne, Ryan M. ; Lafarge, Maxime W. ; Corry, Shania M. ; Fisher, Natalie C. ; Tsantoulis, Petros K. ; Mills, Megan L. ; Ridgway, Rachel A. ; Lannagan, Tamsin R. M. ; Najumudeen, Arafath K. ; Gilroy, Kathryn L. ; Amirkhah, Raheleh ; Maguire, Sarah L. ; Mulholland, Eoghan J. ; Belnoue-Davis, Hayley L. ; Grassi, Elena ; Viviani, Marco ; Rogan, Emily ; Redmond, Keara L. ; Sakhnevych, Svetlana ; McCooey, Aoife J. ; Bull, Courtney ; Hoey, Emily ; Sinevici, Nicoleta ; Hall, Holly ; Ahmaderaghi, Baharak ; Domingo, Enric ; Blake, Andrew ; Richman, Susan D. ; Isella, Claudio ; Miller, Crispin ; Bertotti, Andrea ; Trusolino, Livio ; Loughrey, Maurice B. ; Kerr, Emma M. ; Tejpar, Sabine ; Maughan, Timothy S. ; Lawler, Mark ; Campbell, Andrew D. ; Leedham, Simon J. ; Koelzer, Viktor H. ; Sansom, Owen J. ; Dunne, Philip D.
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2024-03, Vol.56 (3), p.458-472
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Activation of innate-adaptive immune machinery by poly(I:C) exposes a therapeutic vulnerability to prevent relapse in stroma-rich colon cancer
Author / Creator:Corry, Shania M ; McCorry, Amy MB ; Lannagan, Tamsin RM ; Leonard, Niamh A ; Fisher, Natalie C ; Byrne, Ryan M ; Tsantoulis, Petros ; Cortes-Lavaud, Xabier ; Amirkhah, Raheleh ; Redmond, Keara L ; McCooey, Aoife J ; Malla, Sudhir B ; Rogan, Emily ; Sakhnevych, Svetlana ; Gillespie, Michael A ; White, Mark ; Richman, Susan D ; Jackstadt, Rene-Filip ; Campbell, Andrew D ; Maguire, Sarah ; McDade, Simon S ; Longley, Daniel B ; Loughrey, Maurice B ; Coleman, Helen G ; Kerr, Emma M ; Tejpar, Sabine ; Maughan, Timothy ; Leedham, Simon J ; Small, Donna M ; Ryan, Aideen E ; Sansom, Owen J ; Lawler, Mark ; Dunne, Philip D
Publisher:England: BMJ Publishing Group Ltd and British Society of Gastroenterology
Journal title:Gut, 2022-12, Vol.71 (12), p.2502-2517
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Author Correction: Pathway level subtyping identifies a slow-cycling biological phenotype associated with poor clinical outcomes in colorectal cancer
Author / Creator:Malla, Sudhir B. ; Byrne, Ryan M. ; Lafarge, Maxime W. ; Corry, Shania M. ; Fisher, Natalie C. ; Tsantoulis, Petros K. ; Mills, Megan L. ; Ridgway, Rachel A. ; Lannagan, Tamsin R. M. ; Najumudeen, Arafath K. ; Gilroy, Kathryn L. ; Amirkhah, Raheleh ; Maguire, Sarah L. ; Mulholland, Eoghan J. ; Belnoue-Davis, Hayley L. ; Grassi, Elena ; Viviani, Marco ; Rogan, Emily ; Redmond, Keara L. ; Sakhnevych, Svetlana ; McCooey, Aoife J. ; Bull, Courtney ; Hoey, Emily ; Sinevici, Nicoleta ; Hall, Holly ; Ahmaderaghi, Baharak ; Domingo, Enric ; Blake, Andrew ; Richman, Susan D. ; Isella, Claudio ; Miller, Crispin ; Bertotti, Andrea ; Trusolino, Livio ; Loughrey, Maurice B. ; Kerr, Emma M. ; Tejpar, Sabine ; Maughan, Timothy S. ; Lawler, Mark ; Campbell, Andrew D. ; Leedham, Simon J. ; Koelzer, Viktor H. ; Sansom, Owen J. ; Dunne, Philip D.
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2024-06, Vol.56 (6), p.1321-1321
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Viral mimicry redirects immunosuppressed colorectal tumour landscapes towards a proinflammatory and CMS1-like regenerative state
Author / Creator:Corry, Shania Marie ; Sakhnevych, Svetlana ; Mohamed, Noha Ehssan ; Malla, Sudhir B ; Byrne, Ryan ; Young, Andrew ; Amirkhah, Raheleh ; Bull, Courtney ; Lees, Andrea ; Redmond, Keara ; Lannagan, Tamsin ; Ridgway, Rachel A ; Taggart, Fiona ; Fisher, Natalie ; Maughan, Tim ; Lawler, Mark ; Campbell, Andrew ; Leedham, Simon ; Ryan, Aideen ; Longley, Dan ; Small, Donna ; Sansom, Owen ; Dunne, Philip D
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2024-12
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The Molecular Subtyping Resource (MouSR): a user-friendly tool for rapid biological discovery from human or mouse transcriptional data
Author / Creator:Ahmaderaghi, Baharak ; Amirkhah, Raheleh ; Jackson, James ; Lannagan, Tamsin ; Gilroy, Kathryn ; Malla, Sudhir ; Redmond, Keara ; Maughan, Tim ; Leedham, Simon ; Campbell, Andrew ; Sansom, Owen ; Lawler, Mark ; Dunne, Philip D
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-08
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MmCMS: mouse models’ consensus molecular subtypes of colorectal cancer

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Dual gene set enrichment analysis (dualGSEA); an R function that enables more robust biological discovery and pre-clinical model alignment from transcriptomics data

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Molecular Subtyping Resource: a user-friendly tool for rapid biological discovery from transcriptional data

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PLAC8-Mediated Activation of NOX4 Signalling Restores Angiogenic Function of Endothelial Colony-Forming Cells in Experimental Hypoxia

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Pathway level subtyping identifies a slow-cycling biological phenotype associated with poor clinical outcomes in colorectal cancer

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Activation of innate-adaptive immune machinery by poly(I:C) exposes a therapeutic vulnerability to prevent relapse in stroma-rich colon cancer

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Author Correction: Pathway level subtyping identifies a slow-cycling biological phenotype associated with poor clinical outcomes in colorectal cancer

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Viral mimicry redirects immunosuppressed colorectal tumour landscapes towards a proinflammatory and CMS1-like regenerative state

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The Molecular Subtyping Resource (MouSR): a user-friendly tool for rapid biological discovery from human or mouse transcriptional data

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