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41 results for McWeeney,+Shannon+K.

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Clinical resistance to crenolanib in acute myeloid leukemia due to diverse molecular mechanisms
Author / Creator:Zhang, Haijiao ; Savage, Samantha ; Schultz, Anna Reister ; Bottomly, Daniel ; White, Libbey ; Segerdell, Erik ; Wilmot, Beth ; McWeeney, Shannon K. ; Eide, Christopher A. ; Nechiporuk, Tamilla ; Carlos, Amy ; Henson, Rachel ; Lin, Chenwei ; Searles, Robert ; Ho, Hoang ; Lam, Yee Ling ; Sweat, Richard ; Follit, Courtney ; Jain, Vinay ; Lind, Evan ; Borthakur, Gautam ; Garcia-Manero, Guillermo ; Ravandi, Farhad ; Kantarjian, Hagop M. ; Cortes, Jorge ; Collins, Robert ; Buelow, Daelynn R. ; Baker, Sharyn D. ; Druker, Brian J. ; Tyner, Jeffrey W.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2019-01, Vol.10 (1), p.244-13, Article 244
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LSD1 activates a lethal prostate cancer gene network independently of its demethylase function
Author / Creator:Sehrawat, Archana ; Gao, Lina ; Wang, Yuliang ; Bankhead, Armand ; McWeeney, Shannon K. ; King, Carly J. ; Schwartzman, Jacob ; Urrutia, Joshua ; Bisson, William H. ; Coleman, Daniel J. ; Joshi, Sunil K. ; Kim, Dae-Hwan ; Sampson, David A. ; Weinmann, Sheila ; Kallakury, Bhaskar V. S. ; Berry, Deborah L. ; Haque, Reina ; Van Den Eeden, Stephen K. ; Sharma, Sunil ; Bearss, Jared ; Beer, Tomasz M. ; Thomas, George V. ; Heiser, Laura M. ; Alumkal, Joshi J.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2018-05, Vol.115 (18), p.E4179-E4188
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Evaluating Gene Expression in C57BL/6J and DBA/2J Mouse Striatum Using RNA-Seq and Microarrays
Author / Creator:Bottomly, Daniel ; Walter, Nicole A. R. ; Hunter, Jessica Ezzell ; Darakjian, Priscila ; Kawane, Sunita ; Buck, Kari J. ; Searles, Robert P. ; Mooney, Michael ; McWeeney, Shannon K. ; Hitzemann, Robert
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-03, Vol.6 (3), p.e17820-e17820
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REST corepressors RCOR1 and RCOR2 and the repressor INSM1 regulate the proliferation–differentiation balance in the developing brain
Author / Creator:Monaghan, Caitlin E. ; Nechiporuk, Tamilla ; Jeng, Sophia ; McWeeney, Shannon K. ; Wang, Jianxun ; Rosenfeld, Michael G. ; Mandel, Gail
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2017-01, Vol.114 (3), p.E406-E415
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Baseline T cell immune phenotypes predict virologic and disease control upon SARS-CoV infection in Collaborative Cross mice
Author / Creator:Graham, Jessica B. ; Swarts, Jessica L. ; Leist, Sarah R. ; Schäfer, Alexandra ; Menachery, Vineet D. ; Gralinski, Lisa E. ; Jeng, Sophia ; Miller, Darla R. ; Mooney, Michael A. ; McWeeney, Shannon K. ; Ferris, Martin T. ; Pardo-Manuel de Villena, Fernando ; Heise, Mark T. ; Baric, Ralph S. ; Lund, Jennifer M.
Publisher:United States: Public Library of Science
Journal title:PLoS pathogens, 2021-01, Vol.17 (1), p.e1009287-e1009287
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Dual BTK/SYK inhibition with CG-806 (luxeptinib) disrupts B-cell receptor and Bcl-2 signaling networks in mantle cell lymphoma
Author / Creator:Thieme, Elana ; Liu, Tingting ; Bruss, Nur ; Roleder, Carly ; Lam, Vi ; Wang, Xiaoguang ; Nechiporuk, Tamilla ; Shouse, Geoffrey ; Danilova, Olga V. ; Bottomly, Daniel ; McWeeney, Shannon K. ; Tyner, Jeffrey W. ; Kurtz, Stephen E. ; Danilov, Alexey V.
Publisher:London: Nature Publishing Group UK
Journal title:Cell death & disease, 2022-03, Vol.13 (3), p.246-246, Article 246
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Visualization of drug target interactions in the contexts of pathways and networks with ReactomeFIViz [version 1; peer review: 3 approved]
Author / Creator:Blucher, Aurora S ; McWeeney, Shannon K ; Stein, Lincoln ; Wu, Guanming
Publisher:England: Faculty of 1000 Ltd
Journal title:F1000 research, 2019, Vol.8, p.908-908
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Illuminating biological pathways for drug targeting in head and neck squamous cell carcinoma
Author / Creator:Choonoo, Gabrielle ; Blucher, Aurora S. ; Higgins, Samuel ; Boardman, Mitzi ; Jeng, Sophia ; Zheng, Christina ; Jacobs, James ; Anderson, Ashley ; Chamberlin, Steven ; Evans, Nathaniel ; Vigoda, Myles ; Cordier, Benjamin ; Tyner, Jeffrey W. ; Kulesz-Martin, Molly ; McWeeney, Shannon K. ; Laderas, Ted
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-10, Vol.14 (10), p.e0223639-e0223639
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Expression Quantitative Trait Loci for Extreme Host Response to Influenza A in Pre-Collaborative Cross Mice
Author / Creator:Bottomly, Daniel ; Ferris, Martin T ; Aicher, Lauri D ; Rosenzweig, Elizabeth ; Whitmore, Alan ; Aylor, David L ; Haagmans, Bart L ; Gralinski, Lisa E ; Bradel-Tretheway, Birgit G ; Bryan, Janine T ; Threadgill, David W ; Fernando Pardo-Manuel de Villena ; Baric, Ralph S ; Katze, Michael G ; Heise, Mark ; McWeeney, Shannon K
Publisher:Oxford: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2012-02, Vol.2 (2), p.213-221
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Oncogenic CSF3R Mutations in Chronic Neutrophilic Leukemia and Atypical CML
Author / Creator:Maxson, Julia E ; Gotlib, Jason ; Pollyea, Daniel A ; Fleischman, Angela G ; Agarwal, Anupriya ; Eide, Christopher A ; Bottomly, Daniel ; Wilmot, Beth ; McWeeney, Shannon K ; Tognon, Cristina E ; Pond, J. Blake ; Collins, Robert H ; Goueli, Basem ; Oh, Stephen T ; Deininger, Michael W ; Chang, Bill H ; Loriaux, Marc M ; Druker, Brian J ; Tyner, Jeffrey W
Publisher:Waltham, MA: Massachusetts Medical Society
Journal title:The New England journal of medicine, 2013-05, Vol.368 (19), p.1781-1790
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Community profiling of the urinary microbiota: considerations for low-biomass samples
Author / Creator:Karstens, Lisa ; Asquith, Mark ; Caruso, Vincent ; Rosenbaum, James T. ; Fair, Damien A. ; Braun, Jonathan ; Gregory, W. Thomas ; Nardos, Rahel ; McWeeney, Shannon K.
Publisher:London: Nature Publishing Group UK
Journal title:Nature reviews. Urology, 2018-12, Vol.15 (12), p.735-749
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Reversible suppression of T cell function in the bone marrow microenvironment of acute myeloid leukemia
Author / Creator:Lamble, Adam J. ; Kosaka, Yoko ; Laderas, Ted ; Maffit, Allie ; Kaempf, Andy ; Brady, Lauren K. ; Wang, Weiwei ; Long, Nicola ; Saultz, Jennifer N. ; Mori, Motomi ; Soong, David ; LeFave, Clare V. ; Huang, Fei ; Adams, Homer ; Loriaux, Marc M. ; Tognon, Cristina E. ; Lo, Pierrette ; Tyner, Jeffrey W. ; Fan, Guang ; McWeeney, Shannon K. ; Druker, Brian J. ; Lind, Evan F.
Publisher:Washington: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2020-06, Vol.117 (25), p.14331-14341
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Comparison of methods to identify aberrant expression patterns in individual patients: augmenting our toolkit for precision medicine
Author / Creator:Bottomly, Daniel ; Ryabinin, Peter A ; Tyner, Jeffrey W ; Chang, Bill H ; Loriaux, Marc M ; Druker, Brian J ; McWeeney, Shannon K ; Wilmot, Beth
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2013-11, Vol.5 (11), p.103-103, Article 103
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High throughput sequencing in mice: a platform comparison identifies a preponderance of cryptic SNPs
Author / Creator:Walter, Nicole AR ; Bottomly, Daniel ; Laderas, Ted ; Mooney, Michael A ; Darakjian, Priscila ; Searles, Robert P ; Harrington, Christina A ; McWeeney, Shannon K ; Hitzemann, Robert ; Buck, Kari J
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2009-08, Vol.10 (1), p.379-379, Article 379
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ERBB2/HER2 mutations are transforming and therapeutically targetable in leukemia
Author / Creator:Joshi, Sunil K. ; Keck, Jamie M. ; Eide, Christopher A. ; Bottomly, Daniel ; Traer, Elie ; Tyner, Jeffrey W. ; McWeeney, Shannon K. ; Tognon, Cristina E. ; Druker, Brian J.
Publisher:London: Nature Publishing Group UK
Journal title:Leukemia, 2020-10, Vol.34 (10), p.2798-2804
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plethy: management of whole body plethysmography data in R
Author / Creator:Bottomly, Daniel ; Wilmot, Beth ; McWeeney, Shannon K
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2015-04, Vol.16 (1), p.134-134, Article 134
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Utilizing cohort-level and individual networks to predict best response in patients with metastatic triple negative breast cancer
Author / Creator:Bottomly, Daniel ; Zheng, Christina ; Creason, Allison L. ; Mitri, Zahi I. ; Mills, Gordon B. ; McWeeney, Shannon K.
Publisher:London: Nature Publishing Group UK
Journal title:NPJ precision oncology, 2025-06, Vol.9 (1), p.179
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Modeling Host Genetic Regulation of Influenza Pathogenesis in the Collaborative Cross
Author / Creator:Ferris, Martin T. ; Aylor, David L. ; Bottomly, Daniel ; Whitmore, Alan C. ; Aicher, Lauri D. ; Bell, Timothy A. ; Bradel-Tretheway, Birgit ; Bryan, Janine T. ; Buus, Ryan J. ; Gralinski, Lisa E. ; Haagmans, Bart L. ; McMillan, Leonard ; Miller, Darla R. ; Rosenzweig, Elizabeth ; Valdar, William ; Wang, Jeremy ; Churchill, Gary A. ; Threadgill, David W. ; McWeeney, Shannon K. ; Katze, Michael G. ; Pardo-Manuel de Villena, Fernando ; Baric, Ralph S. ; Heise, Mark T.
Publisher:United States: Public Library of Science
Journal title:PLoS pathogens, 2013-02, Vol.9 (2), p.e1003196-e1003196
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ArticlesPeer ReviewedFull Text
Computational Detection of Alternative Exon Usage
Author / Creator:Laderas, Ted G. ; Walter, Nicole A. R. ; Mooney, Michael ; Vartanian, Kristina ; Darakjian, Priscila ; Buck, Kari ; Harrington, Christina A. ; Belknap, John ; Hitzemann, Robert ; McWeeney, Shannon K.
Publisher:Switzerland: Frontiers Research Foundation
Journal title:Frontiers in neuroscience, 2011-01, Vol.5, p.69
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Use of semantic workflows to enhance transparency and reproducibility in clinical omics
Author / Creator:Zheng, Christina L. ; Ratnakar, Varun ; Gil, Yolanda ; McWeeney, Shannon K.
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2015-07, Vol.7 (1), p.73-73, Article 73
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Showing 1 to 20 of 41 results

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Clinical resistance to crenolanib in acute myeloid leukemia due to diverse molecular mechanisms

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LSD1 activates a lethal prostate cancer gene network independently of its demethylase function

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Evaluating Gene Expression in C57BL/6J and DBA/2J Mouse Striatum Using RNA-Seq and Microarrays

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REST corepressors RCOR1 and RCOR2 and the repressor INSM1 regulate the proliferation–differentiation balance in the developing brain

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Baseline T cell immune phenotypes predict virologic and disease control upon SARS-CoV infection in Collaborative Cross mice

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Dual BTK/SYK inhibition with CG-806 (luxeptinib) disrupts B-cell receptor and Bcl-2 signaling networks in mantle cell lymphoma

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Visualization of drug target interactions in the contexts of pathways and networks with ReactomeFIViz [version 1; peer review: 3 approved]

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Illuminating biological pathways for drug targeting in head and neck squamous cell carcinoma

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Expression Quantitative Trait Loci for Extreme Host Response to Influenza A in Pre-Collaborative Cross Mice

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Oncogenic CSF3R Mutations in Chronic Neutrophilic Leukemia and Atypical CML

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Community profiling of the urinary microbiota: considerations for low-biomass samples

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Reversible suppression of T cell function in the bone marrow microenvironment of acute myeloid leukemia

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Comparison of methods to identify aberrant expression patterns in individual patients: augmenting our toolkit for precision medicine

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High throughput sequencing in mice: a platform comparison identifies a preponderance of cryptic SNPs

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ERBB2/HER2 mutations are transforming and therapeutically targetable in leukemia

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plethy: management of whole body plethysmography data in R

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Utilizing cohort-level and individual networks to predict best response in patients with metastatic triple negative breast cancer

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Modeling Host Genetic Regulation of Influenza Pathogenesis in the Collaborative Cross

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Computational Detection of Alternative Exon Usage

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Use of semantic workflows to enhance transparency and reproducibility in clinical omics

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